RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 CLCC1Q96S66 551 aa17.61■□□□□ 0.41
LINC01960-201ENST00000563759 SLC25A31Q9H0C2 315 aa17.61■□□□□ 0.41
LINC01960-201ENST00000563759 TPSG1Q9NRR2 321 aa17.61■□□□□ 0.41
LINC01960-201ENST00000563759 TCF19Q9Y242 345 aa17.61■□□□□ 0.41
LINC01960-201ENST00000563759 TEX15Q9BXT5 2789 aa17.61■□□□□ 0.41
LINC01960-201ENST00000563759 BCL2L11O43521 198 aa17.61■□□□□ 0.41
LINC01960-201ENST00000563759 FGF2P09038 288 aa17.61■□□□□ 0.41
LINC01960-201ENST00000563759 HOXA1P49639 335 aaPredicted RBP17.61■□□□□ 0.41
LINC01960-201ENST00000563759 PSG5Q15238 335 aa17.61■□□□□ 0.41
LINC01960-201ENST00000563759 CYB5R2Q6BCY4 276 aa17.61■□□□□ 0.41
LINC01960-201ENST00000563759 TEX45Q8NA69 505 aa17.61■□□□□ 0.41
LINC01960-201ENST00000563759 EAF1Q96JC9 268 aaPredicted RBP17.61■□□□□ 0.41
LINC01960-201ENST00000563759 SMIM8Q96KF7 97 aa17.61■□□□□ 0.41
LINC01960-201ENST00000563759 COMMD5Q9GZQ3 224 aa17.61■□□□□ 0.41
LINC01960-201ENST00000563759 METTL1Q9UBP6 276 aaKnown RBP17.61■□□□□ 0.41
LINC01960-201ENST00000563759 ZNF257Q9Y2Q1 563 aa17.61■□□□□ 0.41
LINC01960-201ENST00000563759 ZNF469Q96JG9 3925 aaPredicted RBP17.61■□□□□ 0.41
LINC01960-201ENST00000563759 SMAD7O15105 426 aaKnown RBP17.6■□□□□ 0.41
LINC01960-201ENST00000563759 SPDEFO95238 335 aa17.6■□□□□ 0.41
LINC01960-201ENST00000563759 MYOD1P15172 320 aa17.6■□□□□ 0.41
LINC01960-201ENST00000563759 TAS2R30P59541 319 aa17.6■□□□□ 0.41
LINC01960-201ENST00000563759 HSPE1P61604 102 aaKnown RBP17.6■□□□□ 0.41
LINC01960-201ENST00000563759 EWSR1Q01844 656 aaKnown RBP eCLIP17.6■□□□□ 0.41
LINC01960-201ENST00000563759 PLGLAQ15195 96 aa17.6■□□□□ 0.41
LINC01960-201ENST00000563759 PDLIM3Q53GG5 364 aaPredicted RBP17.6■□□□□ 0.41
LINC01960-201ENST00000563759 CIARTQ8N365 385 aaPredicted RBP17.6■□□□□ 0.41
LINC01960-201ENST00000563759 ARPC5LQ9BPX5 153 aa17.6■□□□□ 0.41
LINC01960-201ENST00000563759 HINT2Q9BX68 163 aa17.6■□□□□ 0.41
LINC01960-201ENST00000563759 GON7Q9BXV9 100 aa17.6■□□□□ 0.41
LINC01960-201ENST00000563759 ZNF430Q9H8G1 570 aaPredicted RBP17.6■□□□□ 0.41
LINC01960-201ENST00000563759 IGSF23A1L1A6 192 aa17.59■□□□□ 0.41
LINC01960-201ENST00000563759 OPN1MWP04001 364 aa17.59■□□□□ 0.41
LINC01960-201ENST00000563759 OPN1MW2P0DN77 364 aa17.59■□□□□ 0.41
LINC01960-201ENST00000563759 OPN1MW3P0DN78 364 aa17.59■□□□□ 0.41
LINC01960-201ENST00000563759 KLF17Q5JT82 389 aaPredicted RBP17.59■□□□□ 0.41
LINC01960-201ENST00000563759 SPANXN5Q5MJ07 72 aa17.59■□□□□ 0.41
LINC01960-201ENST00000563759 STX12Q86Y82 276 aa17.59■□□□□ 0.41
LINC01960-201ENST00000563759 TMEM252Q8N6L7 170 aa17.59■□□□□ 0.41
LINC01960-201ENST00000563759 OR5B3Q8NH48 314 aa17.59■□□□□ 0.41
LINC01960-201ENST00000563759 KIAA1456Q9P272 454 aa17.59■□□□□ 0.41
LINC01960-201ENST00000563759 FAM96BQ9Y3D0 163 aa17.59■□□□□ 0.41
LINC01960-201ENST00000563759 A0A0U1RQK1 487 aa17.58■□□□□ 0.41
LINC01960-201ENST00000563759 NBR2O15453 112 aa17.58■□□□□ 0.41
LINC01960-201ENST00000563759 FAM106CPP0CH98 169 aa17.58■□□□□ 0.41
LINC01960-201ENST00000563759 CLEC9AQ6UXN8 241 aa17.58■□□□□ 0.41
LINC01960-201ENST00000563759 ENY2Q9NPA8 101 aa17.58■□□□□ 0.41
LINC01960-201ENST00000563759 SIGLEC9Q9Y336 463 aa17.58■□□□□ 0.41
LINC01960-201ENST00000563759 MYO9AB2RTY4 2548 aa17.58■□□□□ 0.4
LINC01960-201ENST00000563759 TMEM11P17152 192 aa17.58■□□□□ 0.4
LINC01960-201ENST00000563759 TMEM267Q0VDI3 215 aaPredicted RBP17.58■□□□□ 0.4
LINC01960-201ENST00000563759 ZNF471Q9BX82 626 aaPredicted RBP17.58■□□□□ 0.4
LINC01960-201ENST00000563759 HIPK2Q9H2X6 1198 aa17.58■□□□□ 0.4
LINC01960-201ENST00000563759 FBXL15Q9H469 300 aa17.58■□□□□ 0.4
LINC01960-201ENST00000563759 SLA2Q9H6Q3 261 aa17.58■□□□□ 0.4
LINC01960-201ENST00000563759 HEYLQ9NQ87 328 aaPredicted RBP17.58■□□□□ 0.4
LINC01960-201ENST00000563759 FBXL17Q9UF56 701 aa17.58■□□□□ 0.4
LINC01960-201ENST00000563759 NAV3Q8IVL0 2385 aa17.58■□□□□ 0.4
LINC01960-201ENST00000563759 RRHO14718 337 aa17.57■□□□□ 0.4
LINC01960-201ENST00000563759 ACTL6BO94805 426 aa17.57■□□□□ 0.4
LINC01960-201ENST00000563759 PRCDQ00LT1 54 aa17.57■□□□□ 0.4
LINC01960-201ENST00000563759 NHLH2Q02577 135 aa17.57■□□□□ 0.4
LINC01960-201ENST00000563759 PJVKQ0ZLH3 352 aa17.57■□□□□ 0.4
LINC01960-201ENST00000563759 FBLN7Q53RD9 439 aa17.57■□□□□ 0.4
LINC01960-201ENST00000563759 PPP1R27Q86WC6 154 aa17.57■□□□□ 0.4
LINC01960-201ENST00000563759 MMD2Q8IY49 270 aa17.57■□□□□ 0.4
LINC01960-201ENST00000563759 SMIM3Q9BZL3 60 aa17.57■□□□□ 0.4
LINC01960-201ENST00000563759 PLEKHA3Q9HB20 300 aa17.57■□□□□ 0.4
LINC01960-201ENST00000563759 PAIP2BQ9ULR5 123 aaKnown RBP17.57■□□□□ 0.4
LINC01960-201ENST00000563759 TLN2Q9Y4G6 2542 aa17.57■□□□□ 0.4
LINC01960-201ENST00000563759 AKAP9Q99996 3911 aa17.57■□□□□ 0.4
LINC01960-201ENST00000563759 TEX50A0A1B0GTY4 177 aa17.56■□□□□ 0.4
LINC01960-201ENST00000563759 CST7O76096 145 aa17.56■□□□□ 0.4
LINC01960-201ENST00000563759 LY86O95711 162 aa17.56■□□□□ 0.4
LINC01960-201ENST00000563759 F2RL1P55085 397 aa17.56■□□□□ 0.4
LINC01960-201ENST00000563759 BAXQ07812 192 aa17.56■□□□□ 0.4
LINC01960-201ENST00000563759 PRSS8Q16651 343 aa17.56■□□□□ 0.4
LINC01960-201ENST00000563759 SLC51BQ86UW2 128 aa17.56■□□□□ 0.4
LINC01960-201ENST00000563759 NOTCH2Q04721 2471 aa17.56■□□□□ 0.4
LINC01960-201ENST00000563759 CRYGBP07316 175 aa17.56■□□□□ 0.4
LINC01960-201ENST00000563759 IFITM2Q01629 132 aa17.56■□□□□ 0.4
LINC01960-201ENST00000563759 EBI3Q14213 229 aa17.56■□□□□ 0.4
LINC01960-201ENST00000563759 TMEM217Q8N7C4 229 aa17.56■□□□□ 0.4
LINC01960-201ENST00000563759 OR1L8Q8NGR8 309 aa17.56■□□□□ 0.4
LINC01960-201ENST00000563759 ITGB1BP2Q9UKP3 347 aa17.56■□□□□ 0.4
LINC01960-201ENST00000563759 STRAPQ9Y3F4 350 aaKnown RBP17.56■□□□□ 0.4
LINC01960-201ENST00000563759 TAAR5O14804 337 aa17.55■□□□□ 0.4
LINC01960-201ENST00000563759 FBP1P09467 338 aa17.55■□□□□ 0.4
LINC01960-201ENST00000563759 METTL15P1P0C7V9 234 aa17.55■□□□□ 0.4
LINC01960-201ENST00000563759 SULT1A1P50225 295 aa17.55■□□□□ 0.4
LINC01960-201ENST00000563759 TNXAQ16473 311 aa17.55■□□□□ 0.4
LINC01960-201ENST00000563759 FAM120AOSQ5T036 256 aa17.55■□□□□ 0.4
LINC01960-201ENST00000563759 NPBQ8NG41 125 aa17.55■□□□□ 0.4
LINC01960-201ENST00000563759 NCBP2LA6PVI3 153 aaKnown RBP17.54■□□□□ 0.4
LINC01960-201ENST00000563759 NDUFA3O95167 84 aa17.54■□□□□ 0.4
LINC01960-201ENST00000563759 GNB1P62873 340 aa17.54■□□□□ 0.4
LINC01960-201ENST00000563759 C10orf55Q5SWW7 151 aa17.54■□□□□ 0.4
LINC01960-201ENST00000563759 Q8N6K4 173 aa17.54■□□□□ 0.4
LINC01960-201ENST00000563759 OR8H1Q8NGG4 311 aa17.54■□□□□ 0.4
LINC01960-201ENST00000563759 BSCL2Q96G97 398 aaPredicted RBP17.54■□□□□ 0.4
LINC01960-201ENST00000563759 IFNA10P01566 189 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms