RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 TVP23CQ96ET8 276 aa8□□□□□ -1.13
SMG1-205ENST00000561947 NIPSNAP3BQ9BS92 247 aa8□□□□□ -1.13
SMG1-205ENST00000561947 ADGRG4Q8IZF6 3080 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 A0A1W2PPE2 198 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 H0YJW9 148 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 HMGB3O15347 200 aaKnown RBP7.99□□□□□ -1.13
SMG1-205ENST00000561947 CYB5BO43169 146 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 KBTBD11O94819 623 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 PRCDQ00LT1 54 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 SLC35E3Q7Z769 313 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 OR10X1Q8NGY0 326 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 RAB24Q969Q5 203 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 ISOC2Q96AB3 205 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 A0A087X0M5 115 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 TRBV23-1A0A0A0MS06 115 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 A0A1B0GX30 115 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 A0A1W2PPH5 198 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 CA2P00918 260 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 MT-ND4LP03901 98 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 SAA1P0DJI8 122 aaPredicted RBP7.99□□□□□ -1.13
SMG1-205ENST00000561947 CTRB1P17538 263 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 OPRK1P41145 380 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 CDC34P49427 236 aaPredicted RBP7.99□□□□□ -1.13
SMG1-205ENST00000561947 TMEM177Q53S58 311 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 CTRB2Q6GPI1 263 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 TMEM186Q96B77 213 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 HARBI1Q96MB7 349 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 MGST2Q99735 147 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 TMEM204Q9BSN7 226 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 HINT2Q9BX68 163 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 PLEKHA3Q9HB20 300 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 FKBP11Q9NYL4 201 aa7.99□□□□□ -1.13
SMG1-205ENST00000561947 SEC14L6B5MCN3 397 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 IGHV1-8P0DP01 117 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 COL8A2P25067 703 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 TAGLN2P37802 199 aaKnown RBP7.98□□□□□ -1.13
SMG1-205ENST00000561947 REG1BP48304 166 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 PPOXP50336 477 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 ZNF137PP52743 207 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 OR9G1Q8NH87 305 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 NABP2Q9BQ15 211 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 GGTLC1Q9BX51 225 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 TMPRSS5Q9H3S3 457 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 MANBALQ9NQG1 85 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 A0A087WWC5 75 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 TEX50A0A1B0GTY4 177 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 LYNX1G3V0Z9 82 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 FSTL3O95633 263 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 C1QTNF9P0C862 333 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 LYNX1P0DP58 116 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 PSMB3P49720 205 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 RNF212Q495C1 297 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 ARSJQ5FYB0 599 aaPredicted RBP7.98□□□□□ -1.13
SMG1-205ENST00000561947 PDPNQ86YL7 162 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 OR5B3Q8NH48 314 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 ST6GALNAC6Q969X2 333 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 NPVFQ9HCQ7 196 aa7.98□□□□□ -1.13
SMG1-205ENST00000561947 LSM4Q9Y4Z0 139 aaKnown RBP7.98□□□□□ -1.13
SMG1-205ENST00000561947 YIF1AO95070 293 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 OR2C1O95371 312 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 IGHV2-70P01814 119 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 CD81P60033 236 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 MEF2BQ02080 365 aaPredicted RBP7.97□□□□□ -1.13
SMG1-205ENST00000561947 DIAPH2-AS1Q14236 149 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 C11orf42Q8N5U0 333 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 RAB1CQ92928 201 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 FLYWCH2Q96CP2 140 aaKnown RBP7.97□□□□□ -1.13
SMG1-205ENST00000561947 C1orf159Q96HA4 380 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 KCNIP2Q9NS61 270 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 RALYQ9UKM9 306 aaKnown RBP7.97□□□□□ -1.13
SMG1-205ENST00000561947 FNDC10F2Z333 226 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 OPN1MWP04001 364 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 OPN1MW2P0DN77 364 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 OPN1MW3P0DN78 364 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 DEFA4P12838 97 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 RAB13P51153 203 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 GCSAMLQ5JQS6 135 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 FAM24BQ8N5W8 94 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 YPEL4Q96NS1 127 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 PCGF1Q9BSM1 259 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 TMEM133Q9H2Q1 129 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 PXMP4Q9Y6I8 212 aa7.97□□□□□ -1.13
SMG1-205ENST00000561947 B4DEV8 164 aa7.96□□□□□ -1.13
SMG1-205ENST00000561947 NDUFS6O75380 124 aaKnown RBP7.96□□□□□ -1.13
SMG1-205ENST00000561947 IL3RAP26951 378 aa7.96□□□□□ -1.13
SMG1-205ENST00000561947 MAS1LP35410 378 aa7.96□□□□□ -1.13
SMG1-205ENST00000561947 ATP5IP56385 69 aaPredicted RBP7.96□□□□□ -1.13
SMG1-205ENST00000561947 PNRC1Q12796 327 aaPredicted RBP7.96□□□□□ -1.13
SMG1-205ENST00000561947 MIC13Q5XKP0 118 aa7.96□□□□□ -1.13
SMG1-205ENST00000561947 TEPPQ6URK8 271 aa7.96□□□□□ -1.13
SMG1-205ENST00000561947 ZNF841Q6ZN19 808 aa7.96□□□□□ -1.13
SMG1-205ENST00000561947 OR4C13Q8NGP0 309 aa7.96□□□□□ -1.13
SMG1-205ENST00000561947 OR4A5Q8NH83 315 aa7.96□□□□□ -1.13
SMG1-205ENST00000561947 GATAD1Q8WUU5 269 aa7.96□□□□□ -1.13
SMG1-205ENST00000561947 NEIL1Q96FI4 390 aaPredicted RBP7.96□□□□□ -1.13
SMG1-205ENST00000561947 WASHC3Q9Y3C0 194 aa7.96□□□□□ -1.13
SMG1-205ENST00000561947 TNCP24821 2201 aa7.96□□□□□ -1.13
SMG1-205ENST00000561947 ZNF727A8MUV8 499 aa7.96□□□□□ -1.14
SMG1-205ENST00000561947 RAB5AP20339 215 aa7.96□□□□□ -1.14
SMG1-205ENST00000561947 USF1P22415 310 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms