RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 SAMD13Q5VXD3 122 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 ASCL5Q7RTU5 278 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 OR4A5Q8NH83 315 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 TMEM170AQ8WVE7 144 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 MBD3L1Q8WWY6 194 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 NRN1Q9NPD7 142 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 H3BUT2 72 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 APOHP02749 345 aaPredicted RBP8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 SMIM10L1P0DMW3 83 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 NSUN5P1Q3KNT7 163 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 SMIM10Q96HG1 83 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 HIST1H2BLQ99880 126 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 CALYQ9NYX4 217 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 C1QTNF9BB2RNN3 333 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 CXCL1P09341 107 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 CACNG7P62955 275 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 ITLN1Q8WWA0 313 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 FNDC4Q9H6D8 234 aaPredicted RBP8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 MRPL16Q9NX20 251 aaKnown RBP8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 PPIAL4EA0A075B759 164 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 PPIAL4DF5H284 164 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 FGF16O43320 207 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 TYMSP04818 313 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 C1QTNF9P0C862 333 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 PPIAL4FP0DN26 164 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 C1orf185Q5T7R7 199 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 NPIPB3Q92617 1050 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 REG4Q9BYZ8 158 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 PPIAL4AQ9Y536 164 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 ODAMA1E959 279 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 RPL39P5Q59GN2 51 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 HEPN1Q6WQI6 88 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 OR51G1Q8NGK1 321 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 C16orf92Q96LL3 132 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 PLXNB2O15031 1838 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 F8VVB4 439 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 F8VWA3 439 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 TSPAN13O95857 204 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 DLX6P56179 175 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 CX3CL1P78423 397 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 GCSAMLQ5JQS6 135 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 GCSAMQ8N6F7 178 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 WFDC1Q9HC57 220 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 PLSCR2Q9NRY7 297 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 SPTA1P02549 2419 aa8.68□□□□□ -1.02
GTF3C1-202ENST00000561623 FBLN7Q53RD9 439 aa8.67□□□□□ -1.02
GTF3C1-202ENST00000561623 MEGF9Q9H1U4 602 aa8.67□□□□□ -1.02
GTF3C1-202ENST00000561623 IGHV1-45A0A0A0MS14 117 aa8.67□□□□□ -1.02
GTF3C1-202ENST00000561623 PMS2CLQ68D20 193 aa8.67□□□□□ -1.02
GTF3C1-202ENST00000561623 LINC00305Q7Z4B0 112 aa8.67□□□□□ -1.02
GTF3C1-202ENST00000561623 IGFBP2P18065 325 aa8.67□□□□□ -1.02
GTF3C1-202ENST00000561623 PCSK4Q6UW60 755 aa8.67□□□□□ -1.02
GTF3C1-202ENST00000561623 HIST3H2BBQ8N257 126 aa8.67□□□□□ -1.02
GTF3C1-202ENST00000561623 GATAD1Q8WUU5 269 aa8.67□□□□□ -1.02
GTF3C1-202ENST00000561623 PKIBQ9C010 78 aa8.67□□□□□ -1.02
GTF3C1-202ENST00000561623 C1RLQ9NZP8 487 aa8.67□□□□□ -1.02
GTF3C1-202ENST00000561623 ACSF3Q4G176 576 aaPredicted RBP8.67□□□□□ -1.02
GTF3C1-202ENST00000561623 ZNF324BQ6AW86 544 aaPredicted RBP8.67□□□□□ -1.02
GTF3C1-202ENST00000561623 FAM53AQ6NSI3 398 aaPredicted RBP8.67□□□□□ -1.02
GTF3C1-202ENST00000561623 FOXD3Q9UJU5 478 aaPredicted RBP8.67□□□□□ -1.02
GTF3C1-202ENST00000561623 HIST1H1AQ02539 215 aaPredicted RBP8.67□□□□□ -1.02
GTF3C1-202ENST00000561623 TCF24Q7RTU0 167 aa8.67□□□□□ -1.02
GTF3C1-202ENST00000561623 GFI1Q99684 422 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 RNASE7Q9H1E1 156 aaKnown RBP8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 PGPEP1LA6NFU8 196 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 ZNF525Q8N782 197 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 SSBP4Q9BWG4 385 aaPredicted RBP8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 IDI2-AS1Q9NZ38 188 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 JOSD1Q15040 202 aaPredicted RBP8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 TBR1Q16650 682 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 DCAF10Q5QP82 559 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 LDLRAD2Q5SZI1 272 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 PRDM13Q9H4Q3 707 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 ADAMTS7Q9UKP4 1686 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 PRR32B1ATL7 298 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 RELQ04864 619 aaPredicted RBP8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 SAXO1Q8IYX7 474 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 TM2D1Q9BX74 207 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 DOPEY2Q9Y3R5 2298 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 TRBV20OR9-2A0A075B6H5 130 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 WNT9BO14905 357 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 LOXL3P58215 753 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 AMMECR1LQ6DCA0 310 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 C1QL4Q86Z23 238 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 MTURNQ8N3F0 131 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 MS4A5Q9H3V2 200 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 C11orf44Q8N8P7 122 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 LINC01560Q8TB33 94 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 C18orf12Q96KH6 178 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 DUSP15Q9H1R2 295 aaPredicted RBP8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 TMEM106BQ9NUM4 274 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 PHLDA3Q9Y5J5 127 aa8.66□□□□□ -1.02
GTF3C1-202ENST00000561623 SCN4AP35499 1836 aa8.65□□□□□ -1.02
GTF3C1-202ENST00000561623 C17orf98A8MV24 154 aa8.65□□□□□ -1.02
GTF3C1-202ENST00000561623 MIR17HGQ75NE6 70 aa8.65□□□□□ -1.02
GTF3C1-202ENST00000561623 OR10J6PQ8NGY7 276 aa8.65□□□□□ -1.02
GTF3C1-202ENST00000561623 MRPL32Q9BYC8 188 aaKnown RBP8.65□□□□□ -1.02
GTF3C1-202ENST00000561623 PRELID3AQ96N28 172 aa8.65□□□□□ -1.02
GTF3C1-202ENST00000561623 LINC00470Q9BZP3 86 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms