RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 SUMF2Q8NBJ7 301 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 CHST4Q8NCG5 386 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 OR4P4Q8NGL7 312 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 SFRP2Q96HF1 295 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 KIRREL1Q96J84 757 aa9.62□□□□□ -0.87
HERC1-214ENST00000561400 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.61□□□□□ -0.876e-7■■■■■ 30.3
HERC1-214ENST00000561400 LOC102724200A0A096LPH7 203 aaPredicted RBP9.61□□□□□ -0.87
HERC1-214ENST00000561400 PDCD6O75340 191 aa9.61□□□□□ -0.87
HERC1-214ENST00000561400 FUT3P21217 361 aa9.61□□□□□ -0.87
HERC1-214ENST00000561400 RANP62826 216 aaKnown RBP9.61□□□□□ -0.87
HERC1-214ENST00000561400 CIARTQ8N365 385 aaPredicted RBP9.61□□□□□ -0.87
HERC1-214ENST00000561400 STPG4Q8N801 248 aa9.61□□□□□ -0.87
HERC1-214ENST00000561400 OR8B3Q8NGG8 313 aa9.61□□□□□ -0.87
HERC1-214ENST00000561400 ABHD5Q8WTS1 349 aa9.61□□□□□ -0.87
HERC1-214ENST00000561400 ARHGAP5-AS1Q96IT6 56 aa9.61□□□□□ -0.87
HERC1-214ENST00000561400 SNX22Q96L94 193 aa9.61□□□□□ -0.87
HERC1-214ENST00000561400 OR8B2Q96RD0 313 aa9.61□□□□□ -0.87
HERC1-214ENST00000561400 SLC25A10Q9UBX3 287 aaPredicted RBP9.61□□□□□ -0.87
HERC1-214ENST00000561400 RNF212BA8MTL3 300 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 E5RGE8 158 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 PHF1O43189 567 aaPredicted RBP9.6□□□□□ -0.87
HERC1-214ENST00000561400 NDUFB3O43676 98 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 IFNA5P01569 189 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 TRGC2P03986 189 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 CDK2P24941 298 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 DVL1P1P54792 670 aaPredicted RBP9.6□□□□□ -0.87
HERC1-214ENST00000561400 S100A10P60903 97 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 LOXL1Q08397 574 aaPredicted RBP9.6□□□□□ -0.87
HERC1-214ENST00000561400 WDR25Q64LD2 544 aaPredicted RBP9.6□□□□□ -0.87
HERC1-214ENST00000561400 OLFML2AQ68BL7 652 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 MTURNQ8N3F0 131 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 RAB40AQ8WXH6 277 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 VAX2Q9UIW0 290 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 ABCA1O95477 2261 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 RNF222A6NCQ9 220 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 HELTA6NFD8 242 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 OR11H12B2RN74 326 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 C9JQL5 133 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 G3V4G9 280 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 MT-ND4P03905 459 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 UBE2KP61086 200 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 ATXN7L3Q14CW9 347 aaPredicted RBP9.6□□□□□ -0.87
HERC1-214ENST00000561400 LRRC10Q5BKY1 277 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 OR11H1Q8NG94 326 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 OR11H2Q8NH07 326 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 PLPPR1Q8TBJ4 325 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 DYRK2Q92630 601 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 RAB39BQ96DA2 213 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 S100A16Q96FQ6 103 aaKnown RBP9.6□□□□□ -0.87
HERC1-214ENST00000561400 PECRQ9BY49 303 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 FAM234AQ9H0X4 552 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 CLN8Q9UBY8 286 aa9.6□□□□□ -0.87
HERC1-214ENST00000561400 TRAV25A0A0B4J276 109 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 ARPC1BO15143 372 aaKnown RBP9.59□□□□□ -0.87
HERC1-214ENST00000561400 OR7C2O60412 319 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 MT-CO2P00403 227 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 GNB3P16520 340 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 ZFP36P26651 326 aaKnown RBP9.59□□□□□ -0.87
HERC1-214ENST00000561400 OR10J1P30954 320 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 GNB2P62879 340 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 AESQ08117 197 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 KLF9Q13886 244 aaPredicted RBP9.59□□□□□ -0.87
HERC1-214ENST00000561400 CCDC144NLQ6NUI1 221 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 IZUMO1Q8IYV9 350 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 OR2C3Q8N628 320 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 TPRX1Q8N7U7 411 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 FRZBQ92765 325 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 COQ2Q96H96 371 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 TPPP3Q9BW30 176 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 SSBP3Q9BWW4 388 aaPredicted RBP9.59□□□□□ -0.87
HERC1-214ENST00000561400 OR5AC2Q9NZP5 309 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 HSF4Q9ULV5 492 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 URGCP-MRPS24S4R325 110 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 SVEP1Q4LDE5 3571 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 TRAV14DV4A0A0A6YYC5 116 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 KIAA1324LA8MWY0 1029 aaPredicted RBP9.59□□□□□ -0.87
HERC1-214ENST00000561400 PPP5D1E7EU14 171 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 CSN2P05814 226 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 FCGR3AP08637 254 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 EDDM3AQ14507 147 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 PRSS54Q6PEW0 395 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 OR5D13Q8NGL4 314 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 SLC5A7Q9GZV3 580 aa9.59□□□□□ -0.87
HERC1-214ENST00000561400 CSPG4Q6UVK1 2322 aa9.58□□□□□ -0.88
HERC1-214ENST00000561400 TRAV18A0A075B6X5 111 aa9.58□□□□□ -0.88
HERC1-214ENST00000561400 MGST3O14880 152 aa9.58□□□□□ -0.88
HERC1-214ENST00000561400 XRCC3O43542 346 aa9.58□□□□□ -0.88
HERC1-214ENST00000561400 CSF1P09603 554 aa9.58□□□□□ -0.88
HERC1-214ENST00000561400 FAM157CP0CG43 387 aa9.58□□□□□ -0.88
HERC1-214ENST00000561400 PTHLHP12272 177 aa9.58□□□□□ -0.88
HERC1-214ENST00000561400 HIST1H1DP16402 221 aaKnown RBP9.58□□□□□ -0.88
HERC1-214ENST00000561400 GPR12P47775 334 aa9.58□□□□□ -0.88
HERC1-214ENST00000561400 GLIPR1P48060 266 aa9.58□□□□□ -0.88
HERC1-214ENST00000561400 LCN2P80188 198 aa9.58□□□□□ -0.88
HERC1-214ENST00000561400 ZNF260Q3ZCT1 412 aa9.58□□□□□ -0.88
HERC1-214ENST00000561400 COX19Q49B96 90 aa9.58□□□□□ -0.88
HERC1-214ENST00000561400 TCTEX1D4Q5JR98 221 aa9.58□□□□□ -0.88
HERC1-214ENST00000561400 COA6Q5JTJ3 125 aaKnown RBP9.58□□□□□ -0.88
HERC1-214ENST00000561400 OR52L2PQ8NGH6 319 aa9.58□□□□□ -0.88
HERC1-214ENST00000561400 PPP1R35Q8TAP8 253 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms