RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 HPRT1P00492 218 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 PMP2P02689 132 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 CLEC3BP05452 202 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 CD7P09564 240 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 CTRB1P17538 263 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 GNRHRP30968 328 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 OR2B8PP59922 312 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 CD81P60033 236 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 HERV-K104P61576 105 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 CATR1Q13166 79 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 AADACL3Q5VUY0 350 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 CTRB2Q6GPI1 263 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 DEFB125Q8N687 156 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 SAMD12Q8N8I0 201 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 DMBX1Q8NFW5 382 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 OR2K2Q8NGT1 345 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 OR4A5Q8NH83 315 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 CACNG8Q8WXS5 425 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 EEF1AKMT3Q96AZ1 226 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 YIPF6Q96EC8 236 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 CCDC140Q96MF4 163 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 NEURL2Q9BR09 285 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 SPATA25Q9BR10 227 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 RETNQ9HD89 108 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 EHFQ9NZC4 300 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 STAB2Q8WWQ8 2551 aa7.72□□□□□ -1.17
LDLR-214ENST00000560628 IGLV11-55A0A075B6I3 123 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 IGHV3-35A0A0C4DH35 117 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 MFSD2BA6NFX1 497 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 PGLYRP1O75594 196 aaPredicted RBP7.71□□□□□ -1.18
LDLR-214ENST00000560628 TPPPO94811 219 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 NQO2P16083 231 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 HIST1H1BP16401 226 aaKnown RBP7.71□□□□□ -1.18
LDLR-214ENST00000560628 CBLN1P23435 193 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 TAS2R31P59538 309 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 TAS2R20P59543 309 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 FAM106AQ4KMX7 169 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 FAM209BQ5JX69 171 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 UBE2NLQ5JXB2 153 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 TMEM69Q5SWH9 247 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 DHRS11Q6UWP2 260 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 GPHB5Q86YW7 130 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 TSPAN14Q8NG11 270 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 OR10W1Q8NGF6 305 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 ISOC1Q96CN7 298 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 WDR89Q96FK6 387 aaPredicted RBP7.71□□□□□ -1.18
LDLR-214ENST00000560628 ZNF2Q9BSG1 426 aaPredicted RBP7.71□□□□□ -1.18
LDLR-214ENST00000560628 COMMD5Q9GZQ3 224 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 WFDC10AQ9H1F0 79 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 EDA2RQ9HAV5 297 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 TMEM140Q9NV12 185 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 SLC2A8Q9NY64 477 aa7.71□□□□□ -1.18
LDLR-214ENST00000560628 A0A087WXM4 84 aa7.7□□□□□ -1.18
LDLR-214ENST00000560628 TEX50A0A1B0GTY4 177 aa7.7□□□□□ -1.18
LDLR-214ENST00000560628 IGLC7A0M8Q6 106 aa7.7□□□□□ -1.18
LDLR-214ENST00000560628 RBMY1BA6NDE4 496 aaKnown RBP7.7□□□□□ -1.18
LDLR-214ENST00000560628 RBMY1EA6NEQ0 496 aaKnown RBP7.7□□□□□ -1.18
LDLR-214ENST00000560628 OR11H12B2RN74 326 aa7.7□□□□□ -1.18
LDLR-214ENST00000560628 LGALS9O00182 355 aa7.7□□□□□ -1.18
LDLR-214ENST00000560628 TMEM127O75204 238 aa7.7□□□□□ -1.18
LDLR-214ENST00000560628 IFNA6P05013 189 aa7.7□□□□□ -1.18
LDLR-214ENST00000560628 RBMY1DP0C7P1 496 aaKnown RBP7.7□□□□□ -1.18
LDLR-214ENST00000560628 PRSS3P35030 304 aa7.7□□□□□ -1.18
LDLR-214ENST00000560628 LPAR6P43657 344 aa7.7□□□□□ -1.18
LDLR-214ENST00000560628 POU2AF1Q16633 256 aa7.7□□□□□ -1.18
LDLR-214ENST00000560628 TM4SF20Q53R12 229 aa7.7□□□□□ -1.18
LDLR-214ENST00000560628 LYSMD2Q8IV50 215 aa7.7□□□□□ -1.18
LDLR-214ENST00000560628 CROCCP3Q8IVE0 287 aa7.7□□□□□ -1.18
LDLR-214ENST00000560628 UXS1Q8NBZ7 420 aa7.7□□□□□ -1.18
LDLR-214ENST00000560628 OR5H2Q8NGV7 314 aa7.7□□□□□ -1.18
LDLR-214ENST00000560628 CD300LFQ8TDQ1 290 aa7.7□□□□□ -1.18
LDLR-214ENST00000560628 FAM110AQ9BQ89 295 aa7.7□□□□□ -1.18
LDLR-214ENST00000560628 PLEKHA2Q9HB19 425 aa7.7□□□□□ -1.18
LDLR-214ENST00000560628 TECRQ9NZ01 308 aaKnown RBP7.7□□□□□ -1.18
LDLR-214ENST00000560628 NSG2Q9Y328 171 aa7.7□□□□□ -1.18
LDLR-214ENST00000560628 CEPT1Q9Y6K0 416 aa7.7□□□□□ -1.18
LDLR-214ENST00000560628 TRBV7-1A0A0A6YYK4 115 aa7.69□□□□□ -1.18
LDLR-214ENST00000560628 IGHV3-21A0A0B4J1V1 117 aa7.69□□□□□ -1.18
LDLR-214ENST00000560628 TMEM213A2RRL7 107 aa7.69□□□□□ -1.18
LDLR-214ENST00000560628 SCAF4O95104 1147 aaKnown RBP7.69□□□□□ -1.18
LDLR-214ENST00000560628 KRASP01116 189 aa7.69□□□□□ -1.18
LDLR-214ENST00000560628 RLN1P04808 185 aa7.69□□□□□ -1.18
LDLR-214ENST00000560628 EIF4EP06730 217 aaKnown RBP7.69□□□□□ -1.18
LDLR-214ENST00000560628 TRAPPC2P0DI81 140 aa7.69□□□□□ -1.18
LDLR-214ENST00000560628 TRAPPC2BP0DI82 140 aa7.69□□□□□ -1.18
LDLR-214ENST00000560628 OR13C7P0DN81 318 aa7.69□□□□□ -1.18
LDLR-214ENST00000560628 HLA-DMAP28067 261 aa7.69□□□□□ -1.18
LDLR-214ENST00000560628 GPR183P32249 361 aa7.69□□□□□ -1.18
LDLR-214ENST00000560628 ERVK-16P61578 105 aa7.69□□□□□ -1.18
LDLR-214ENST00000560628 KLK9Q2XQG4 91 aa7.69□□□□□ -1.18
LDLR-214ENST00000560628 ZNF57Q68EA5 555 aaPredicted RBP7.69□□□□□ -1.18
LDLR-214ENST00000560628 SLC25A24Q6NUK1 477 aa7.69□□□□□ -1.18
LDLR-214ENST00000560628 UNQ9165/PRO28630Q6UXU0 137 aa7.69□□□□□ -1.18
LDLR-214ENST00000560628 LINC00322Q6ZN03 302 aaPredicted RBP7.69□□□□□ -1.18
LDLR-214ENST00000560628 LAX1Q8IWV1 398 aa7.69□□□□□ -1.18
LDLR-214ENST00000560628 OR6F1Q8NGZ6 308 aa7.69□□□□□ -1.18
LDLR-214ENST00000560628 FCAMRQ8WWV6 532 aa7.69□□□□□ -1.18
LDLR-214ENST00000560628 MOB3AQ96BX8 217 aa7.69□□□□□ -1.18
LDLR-214ENST00000560628 DGCR14Q96DF8 476 aaKnown RBP7.69□□□□□ -1.18
LDLR-214ENST00000560628 CXorf58Q96LI9 332 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms