RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 SLC38A6Q8IZM9 456 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 TTC9CQ8N5M4 171 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 OR4C12Q96R67 309 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 RSRP1Q9BUV0 290 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 AKIP1Q9NQ31 210 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 SLC2A9Q9NRM0 540 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 PEF1Q9UBV8 284 aaKnown RBP10□□□□□ -0.81
CTDSPL2-209ENST00000560620 ZNF257Q9Y2Q1 563 aa10□□□□□ -0.81
CTDSPL2-209ENST00000560620 TRAV3A0A0B4J244 114 aa9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 TEX22C9J3V5 150 aa9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 E7EUB6 86 aa9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 GABARAPH6UMI1 98 aa9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 UPK2O00526 184 aa9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 OR2J3O76001 311 aa9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 RAB3DO95716 219 aa9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 ZNF735P0CB33 412 aa9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 AREGP15514 252 aa9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 TBPP20226 339 aa9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 G6PCP35575 357 aa9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 PPP5CP53041 499 aa9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 MRPS10P82664 201 aaKnown RBP9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 EXOSC2Q13868 293 aaKnown RBP9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 RPEL1Q2QD12 228 aa9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 NECAP1Q8NC96 275 aa9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 MCFD2Q8NI22 146 aa9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 PRR25Q96S07 402 aa9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 ELOVL1Q9BW60 279 aa9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 HINT2Q9BX68 163 aa9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 TGP01266 2768 aa9.99□□□□□ -0.81
CTDSPL2-209ENST00000560620 SNAPC5O75971 98 aa9.98□□□□□ -0.81
CTDSPL2-209ENST00000560620 BRI3O95415 125 aa9.98□□□□□ -0.81
CTDSPL2-209ENST00000560620 SERPINE2P07093 398 aa9.98□□□□□ -0.81
CTDSPL2-209ENST00000560620 PI3P19957 117 aa9.98□□□□□ -0.81
CTDSPL2-209ENST00000560620 UCP3P55916 312 aa9.98□□□□□ -0.81
CTDSPL2-209ENST00000560620 ZNF45Q02386 682 aa9.98□□□□□ -0.81
CTDSPL2-209ENST00000560620 POU2AF1Q16633 256 aa9.98□□□□□ -0.81
CTDSPL2-209ENST00000560620 TATDN3Q17R31 274 aa9.98□□□□□ -0.81
CTDSPL2-209ENST00000560620 C15orf32Q32M92 178 aa9.98□□□□□ -0.81
CTDSPL2-209ENST00000560620 STEAP1BQ6NZ63 245 aa9.98□□□□□ -0.81
CTDSPL2-209ENST00000560620 ZNF343Q6P1L6 599 aa9.98□□□□□ -0.81
CTDSPL2-209ENST00000560620 C19orf35Q6ZS72 473 aa9.98□□□□□ -0.81
CTDSPL2-209ENST00000560620 ARRDC1Q8N5I2 433 aa9.98□□□□□ -0.81
CTDSPL2-209ENST00000560620 TMEM229BQ8NBD8 167 aa9.98□□□□□ -0.81
CTDSPL2-209ENST00000560620 FBXL7Q9UJT9 491 aa9.98□□□□□ -0.81
CTDSPL2-209ENST00000560620 TRBV9A0A0B4J1U6 114 aa9.97□□□□□ -0.81
CTDSPL2-209ENST00000560620 NPIPB5A8MRT5 1133 aa9.97□□□□□ -0.81
CTDSPL2-209ENST00000560620 RBMXL2O75526 392 aaKnown RBP9.97□□□□□ -0.81
CTDSPL2-209ENST00000560620 TRBV12-3P01733 135 aa9.97□□□□□ -0.81
CTDSPL2-209ENST00000560620 PSMB6P28072 239 aa9.97□□□□□ -0.81
CTDSPL2-209ENST00000560620 SYNJ2BPP57105 145 aa9.97□□□□□ -0.81
CTDSPL2-209ENST00000560620 OR2B8PP59922 312 aa9.97□□□□□ -0.81
CTDSPL2-209ENST00000560620 DCTN2Q13561 401 aaKnown RBP9.97□□□□□ -0.81
CTDSPL2-209ENST00000560620 ZNF585BQ52M93 769 aa9.97□□□□□ -0.81
CTDSPL2-209ENST00000560620 ACSM6Q6P461 480 aa9.97□□□□□ -0.81
CTDSPL2-209ENST00000560620 OR4D10Q8NGI6 311 aa9.97□□□□□ -0.81
CTDSPL2-209ENST00000560620 QTRT1Q9BXR0 403 aaKnown RBP9.97□□□□□ -0.81
CTDSPL2-209ENST00000560620 SLIRPQ9GZT3 109 aaKnown RBP9.97□□□□□ -0.81
CTDSPL2-209ENST00000560620 ZNF256Q9Y2P7 627 aaPredicted RBP9.97□□□□□ -0.81
CTDSPL2-209ENST00000560620 NSG2Q9Y328 171 aa9.97□□□□□ -0.81
CTDSPL2-209ENST00000560620 CEPT1Q9Y6K0 416 aa9.97□□□□□ -0.81
CTDSPL2-209ENST00000560620 A0A1B0GW64 132 aa9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 FABP12A6NFH5 140 aa9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 DISC1C4P0D8 188 aa9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 IGHV3-23P01764 117 aa9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 TRAPPC2P0DI81 140 aa9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 TRAPPC2BP0DI82 140 aa9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 MECP2P51608 486 aaKnown RBP9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 PIGPP57054 158 aa9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 SSBP1Q04837 148 aaKnown RBP9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 MEF2DQ14814 521 aa9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 FAAP20Q6NZ36 180 aa9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 H2BFWTQ7Z2G1 175 aa9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 OR6Q1Q8NGQ2 317 aa9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 TERB2Q8NHR7 220 aa9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 ZFAND1Q8TCF1 268 aa9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 SMIM4Q8WVI0 70 aa9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 ZNF486Q96H40 463 aaPredicted RBP9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 TSC22D3Q99576 134 aa9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 COPZ2Q9P299 210 aa9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 RABL2AQ9UBK7 228 aaPredicted RBP9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 RSL24D1Q9UHA3 163 aaKnown RBP9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 RABL2BQ9UNT1 228 aa9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 OR51B2Q9Y5P1 312 aa9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 S4R3C0 116 aa9.96□□□□□ -0.82
CTDSPL2-209ENST00000560620 TEX50A0A1B0GTY4 177 aa9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 CGB1A6NKQ9 187 aa9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 CYB5BO43169 146 aa9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 CD74P04233 296 aa9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 CRYGCP07315 174 aa9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 HIST1H1BP16401 226 aaKnown RBP9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 CTRB1P17538 263 aa9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 TNFSF8P32971 234 aa9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 CD69Q07108 199 aa9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 CTRB2Q6GPI1 263 aa9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 CCDC71LQ8N9Z2 235 aa9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 OR10W1Q8NGF6 305 aa9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 OR9G4Q8NGQ1 327 aa9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 OR1L8Q8NGR8 309 aa9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 OR4A16Q8NH70 328 aa9.95□□□□□ -0.82
CTDSPL2-209ENST00000560620 MARCH1Q8TCQ1 289 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms