RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 CMTM3Q96MX0 182 aa11.24□□□□□ -0.61
IDH3A-219ENST00000560414 ASCL2Q99929 193 aa11.24□□□□□ -0.61
IDH3A-219ENST00000560414 ELOVL1Q9BW60 279 aa11.24□□□□□ -0.61
IDH3A-219ENST00000560414 HRASLSQ9HDD0 168 aa11.24□□□□□ -0.61
IDH3A-219ENST00000560414 DPPA5A6NC42 116 aa11.23□□□□□ -0.61
IDH3A-219ENST00000560414 FAM223BA6NKX1 122 aa11.23□□□□□ -0.61
IDH3A-219ENST00000560414 PGLYRP1O75594 196 aaPredicted RBP11.23□□□□□ -0.61
IDH3A-219ENST00000560414 S1PR2O95136 353 aa11.23□□□□□ -0.61
IDH3A-219ENST00000560414 HPRT1P00492 218 aa11.23□□□□□ -0.61
IDH3A-219ENST00000560414 RLN1P04808 185 aa11.23□□□□□ -0.61
IDH3A-219ENST00000560414 ZNF735P0CB33 412 aa11.23□□□□□ -0.61
IDH3A-219ENST00000560414 GP9P14770 177 aa11.23□□□□□ -0.61
IDH3A-219ENST00000560414 AREGP15514 252 aa11.23□□□□□ -0.61
IDH3A-219ENST00000560414 HLA-GP17693 338 aa11.23□□□□□ -0.61
IDH3A-219ENST00000560414 MAS1LP35410 378 aa11.23□□□□□ -0.61
IDH3A-219ENST00000560414 EXOSC2Q13868 293 aaKnown RBP11.23□□□□□ -0.61
IDH3A-219ENST00000560414 FAM223AQ8IWN6 122 aa11.23□□□□□ -0.61
IDH3A-219ENST00000560414 OR6F1Q8NGZ6 308 aa11.23□□□□□ -0.61
IDH3A-219ENST00000560414 FXYD6Q9H0Q3 95 aa11.23□□□□□ -0.61
IDH3A-219ENST00000560414 SLC2A9Q9NRM0 540 aa11.23□□□□□ -0.61
IDH3A-219ENST00000560414 BET1LQ9NYM9 111 aa11.23□□□□□ -0.61
IDH3A-219ENST00000560414 SCO2A0A1W2PP80 73 aa11.22□□□□□ -0.61
IDH3A-219ENST00000560414 CGB1A6NKQ9 187 aa11.22□□□□□ -0.61
IDH3A-219ENST00000560414 FAM25AB3EWG3 89 aa11.22□□□□□ -0.61
IDH3A-219ENST00000560414 FAM25CB3EWG5 89 aa11.22□□□□□ -0.61
IDH3A-219ENST00000560414 FAM25GB3EWG6 89 aa11.22□□□□□ -0.61
IDH3A-219ENST00000560414 REG1AP05451 166 aa11.22□□□□□ -0.61
IDH3A-219ENST00000560414 NQO2P16083 231 aa11.22□□□□□ -0.61
IDH3A-219ENST00000560414 TAS2R31P59538 309 aa11.22□□□□□ -0.61
IDH3A-219ENST00000560414 RPEL1Q2QD12 228 aa11.22□□□□□ -0.61
IDH3A-219ENST00000560414 RNASE12Q5GAN4 147 aaKnown RBP11.22□□□□□ -0.61
IDH3A-219ENST00000560414 IL34Q6ZMJ4 242 aa11.22□□□□□ -0.61
IDH3A-219ENST00000560414 SLC25A42Q86VD7 318 aa11.22□□□□□ -0.61
IDH3A-219ENST00000560414 NECAP1Q8NC96 275 aa11.22□□□□□ -0.61
IDH3A-219ENST00000560414 OR9G4Q8NGQ1 327 aa11.22□□□□□ -0.61
IDH3A-219ENST00000560414 AIFM2Q9BRQ8 373 aa11.22□□□□□ -0.61
IDH3A-219ENST00000560414 ZNF257Q9Y2Q1 563 aa11.22□□□□□ -0.61
IDH3A-219ENST00000560414 SMAD5-AS1Q9Y6J3 95 aa11.22□□□□□ -0.61
IDH3A-219ENST00000560414 NPIPB5A8MRT5 1133 aa11.21□□□□□ -0.61
IDH3A-219ENST00000560414 BMPR1BO00238 502 aa11.21□□□□□ -0.61
IDH3A-219ENST00000560414 UPK2O00526 184 aa11.21□□□□□ -0.61
IDH3A-219ENST00000560414 IGLV1-51P01701 117 aa11.21□□□□□ -0.61
IDH3A-219ENST00000560414 IGHV3-23P01764 117 aa11.21□□□□□ -0.61
IDH3A-219ENST00000560414 ZNF182P17025 639 aaPredicted RBP11.21□□□□□ -0.61
IDH3A-219ENST00000560414 PSMB6P28072 239 aa11.21□□□□□ -0.61
IDH3A-219ENST00000560414 POU2AF1Q16633 256 aa11.21□□□□□ -0.61
IDH3A-219ENST00000560414 C15orf32Q32M92 178 aa11.21□□□□□ -0.61
IDH3A-219ENST00000560414 MZT2AQ6P582 158 aa11.21□□□□□ -0.61
IDH3A-219ENST00000560414 DMBX1Q8NFW5 382 aa11.21□□□□□ -0.61
IDH3A-219ENST00000560414 OR4A5Q8NH83 315 aa11.21□□□□□ -0.61
IDH3A-219ENST00000560414 CD300LFQ8TDQ1 290 aa11.21□□□□□ -0.61
IDH3A-219ENST00000560414 BORCS5Q969J3 196 aa11.21□□□□□ -0.61
IDH3A-219ENST00000560414 MRPS26Q9BYN8 205 aaKnown RBP11.21□□□□□ -0.61
IDH3A-219ENST00000560414 PLEKHA2Q9HB19 425 aa11.21□□□□□ -0.61
IDH3A-219ENST00000560414 SCPEP1Q9HB40 452 aa11.21□□□□□ -0.61
IDH3A-219ENST00000560414 TMEM140Q9NV12 185 aa11.21□□□□□ -0.61
IDH3A-219ENST00000560414 FBXL7Q9UJT9 491 aa11.21□□□□□ -0.61
IDH3A-219ENST00000560414 S4R3C0 116 aa11.21□□□□□ -0.61
IDH3A-219ENST00000560414 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.2□□□□□ -0.62
IDH3A-219ENST00000560414 PPP5D1E7EU14 171 aa11.2□□□□□ -0.62
IDH3A-219ENST00000560414 NDUFB8O95169 186 aa11.2□□□□□ -0.62
IDH3A-219ENST00000560414 CRYGCP07315 174 aa11.2□□□□□ -0.62
IDH3A-219ENST00000560414 F2RP25116 425 aa11.2□□□□□ -0.62
IDH3A-219ENST00000560414 LPAR6P43657 344 aa11.2□□□□□ -0.62
IDH3A-219ENST00000560414 ALDH3B2P48448 385 aa11.2□□□□□ -0.62
IDH3A-219ENST00000560414 OR2B8PP59922 312 aa11.2□□□□□ -0.62
IDH3A-219ENST00000560414 TSPAN5P62079 268 aa11.2□□□□□ -0.62
IDH3A-219ENST00000560414 TATDN3Q17R31 274 aa11.2□□□□□ -0.62
IDH3A-219ENST00000560414 PHLDA2Q53GA4 152 aa11.2□□□□□ -0.62
IDH3A-219ENST00000560414 GPR141Q7Z602 305 aa11.2□□□□□ -0.62
IDH3A-219ENST00000560414 FCAMRQ8WWV6 532 aa11.2□□□□□ -0.62
IDH3A-219ENST00000560414 DGCR14Q96DF8 476 aaKnown RBP11.2□□□□□ -0.62
IDH3A-219ENST00000560414 M0QYG6 137 aa11.19□□□□□ -0.62
IDH3A-219ENST00000560414 GPR31O00270 319 aa11.19□□□□□ -0.62
IDH3A-219ENST00000560414 HLA-AP01891 365 aaKnown RBP11.19□□□□□ -0.62
IDH3A-219ENST00000560414 CSN3P07498 182 aa11.19□□□□□ -0.62
IDH3A-219ENST00000560414 CTRB1P17538 263 aa11.19□□□□□ -0.62
IDH3A-219ENST00000560414 RCVRNP35243 200 aa11.19□□□□□ -0.62
IDH3A-219ENST00000560414 ZNF585BQ52M93 769 aa11.19□□□□□ -0.62
IDH3A-219ENST00000560414 CTRB2Q6GPI1 263 aa11.19□□□□□ -0.62
IDH3A-219ENST00000560414 CMTM1Q8IZ96 169 aa11.19□□□□□ -0.62
IDH3A-219ENST00000560414 AP3S1Q92572 193 aa11.19□□□□□ -0.62
IDH3A-219ENST00000560414 COMMD5Q9GZQ3 224 aa11.19□□□□□ -0.62
IDH3A-219ENST00000560414 COMMD9Q9P000 198 aa11.19□□□□□ -0.62
IDH3A-219ENST00000560414 EXTL2Q9UBQ6 330 aa11.19□□□□□ -0.62
IDH3A-219ENST00000560414 KLK11Q9UBX7 282 aa11.19□□□□□ -0.62
IDH3A-219ENST00000560414 DMRT1Q9Y5R6 373 aa11.19□□□□□ -0.62
IDH3A-219ENST00000560414 IGLC7A0M8Q6 106 aa11.18□□□□□ -0.62
IDH3A-219ENST00000560414 MARCH11A6NNE9 402 aa11.18□□□□□ -0.62
IDH3A-219ENST00000560414 KRASP01116 189 aa11.18□□□□□ -0.62
IDH3A-219ENST00000560414 NHLRC4P0CG21 123 aaPredicted RBP11.18□□□□□ -0.62
IDH3A-219ENST00000560414 DEFA4P12838 97 aa11.18□□□□□ -0.62
IDH3A-219ENST00000560414 G6PCP35575 357 aa11.18□□□□□ -0.62
IDH3A-219ENST00000560414 ERVK-16P61578 105 aa11.18□□□□□ -0.62
IDH3A-219ENST00000560414 SPCS2Q15005 226 aa11.18□□□□□ -0.62
IDH3A-219ENST00000560414 WFDC3Q8IUB2 231 aa11.18□□□□□ -0.62
IDH3A-219ENST00000560414 OR10W1Q8NGF6 305 aa11.18□□□□□ -0.62
IDH3A-219ENST00000560414 OR52I2Q8NH67 350 aa11.18□□□□□ -0.62
IDH3A-219ENST00000560414 NSG2Q9Y328 171 aa11.18□□□□□ -0.62
IDH3A-219ENST00000560414 HUWE1Q7Z6Z7 4374 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms