RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 VKORC1L1Q8N0U8 176 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 PUSL1Q8N0Z8 303 aaKnown RBP5.17□□□□□ -1.58
SPG11-221ENST00000560299 Q8N3U1 123 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 OR5B3Q8NH48 314 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 OR52E5Q8NH55 327 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 TMEM167AQ8TBQ9 72 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 CFHR4Q92496 578 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 DCUN1D4Q92564 292 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 WDR89Q96FK6 387 aaPredicted RBP5.17□□□□□ -1.58
SPG11-221ENST00000560299 RAB40CQ96S21 281 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 COMMD5Q9GZQ3 224 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 HIPK2Q9H2X6 1198 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 ZC4H2Q9NQZ6 224 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 ZNF257Q9Y2Q1 563 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 NSG2Q9Y328 171 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 A0A0D9SG52 128 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 A0A0G2JRQ6 117 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 A0A1W2PN81 502 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 C15orf61A6NNL5 157 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 NCBP2LA6PVI3 153 aaKnown RBP5.16□□□□□ -1.58
SPG11-221ENST00000560299 SRRM4A7MD48 611 aaKnown RBP5.16□□□□□ -1.58
SPG11-221ENST00000560299 CEBPZOSA8MTT3 80 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 SMLR1H3BR10 107 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 K7EPK0 472 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 RRHO14718 337 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 NBR2O15453 112 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 SLC25A17O43808 307 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 CHST1O43916 411 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 SCAF4O95104 1147 aaKnown RBP5.16□□□□□ -1.58
SPG11-221ENST00000560299 FSHBP01225 129 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 IL6RP08887 468 aaPredicted RBP5.16□□□□□ -1.58
SPG11-221ENST00000560299 OR9G9P0C7N8 305 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 CHRNA7P36544 502 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 SRP14P37108 136 aaKnown RBP5.16□□□□□ -1.58
SPG11-221ENST00000560299 P2RY1P47900 373 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 F2RL1P55085 397 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 TAS2R30P59541 319 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 HSPE1P61604 102 aaKnown RBP5.16□□□□□ -1.58
SPG11-221ENST00000560299 RELBQ01201 579 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 TNFRSF9Q07011 255 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 CD300CQ08708 224 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 HNF4GQ14541 408 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 PSG5Q15238 335 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 IZUMO4Q1ZYL8 232 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 LRRC75BQ2VPJ9 315 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 AARDQ4LEZ3 155 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 CXorf66Q5JRM2 361 aaPredicted RBP5.16□□□□□ -1.58
SPG11-221ENST00000560299 KLF17Q5JT82 389 aaPredicted RBP5.16□□□□□ -1.58
SPG11-221ENST00000560299 LDLRAD2Q5SZI1 272 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 RUSC1-AS1Q66K80 236 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 Q6ZRM9 215 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 ACOT7LQ6ZUV0 252 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 C9orf139Q6ZV77 190 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 PPP1R27Q86WC6 154 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 FAM71E2Q8N5Q1 922 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 NPBQ8NG41 125 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 OR1L8Q8NGR8 309 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 EAF1Q96JC9 268 aaPredicted RBP5.16□□□□□ -1.58
SPG11-221ENST00000560299 SSX3Q99909 188 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 SLC25A31Q9H0C2 315 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 PRDM13Q9H4Q3 707 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 ZFAND3Q9H8U3 227 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 YAE1D1Q9NRH1 226 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 TMEM14BQ9NUH8 114 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 MBD2Q9UBB5 411 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 METTL1Q9UBP6 276 aaKnown RBP5.16□□□□□ -1.58
SPG11-221ENST00000560299 HSPB7Q9UBY9 170 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 FOXA2Q9Y261 457 aaPredicted RBP5.16□□□□□ -1.58
SPG11-221ENST00000560299 SIGLEC9Q9Y336 463 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 OR51B2Q9Y5P1 312 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 WSB1Q9Y6I7 421 aa5.16□□□□□ -1.58
SPG11-221ENST00000560299 TRAV14DV4A0A0A6YYC5 116 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 A0A0U1RQK1 487 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 BOLA2-SMG1P6H3BVE0 249 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 M0QZK8 103 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 ARPC5O15511 151 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 SSSCA1O60232 199 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 TSC22D2O75157 780 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 OR2F2O95006 317 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 NDUFA3O95167 84 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 CNIH1O95406 144 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 IGLV2-23P01705 113 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 LYL1P12980 280 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 CAV2P51636 162 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 AP2S1P53680 142 aaPredicted RBP5.15□□□□□ -1.59
SPG11-221ENST00000560299 SUB1P53999 127 aaKnown RBP eCLIP5.15□□□□□ -1.59
SPG11-221ENST00000560299 ATP5IP56385 69 aaPredicted RBP5.15□□□□□ -1.59
SPG11-221ENST00000560299 OR2B8PP59922 312 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 POLR2GP62487 172 aaKnown RBP eCLIP5.15□□□□□ -1.59
SPG11-221ENST00000560299 ERHP84090 104 aaKnown RBP5.15□□□□□ -1.59
SPG11-221ENST00000560299 OR2F1Q13607 317 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 PRSS8Q16651 343 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 C5orf64Q2M2E5 130 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 PDLIM3Q53GG5 364 aaPredicted RBP5.15□□□□□ -1.59
SPG11-221ENST00000560299 Q5BKY6 102 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 RBMS3Q6XE24 437 aaKnown RBP5.15□□□□□ -1.59
SPG11-221ENST00000560299 C16orf82Q7Z2V1 217 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 HSD17B13Q7Z5P4 300 aaPredicted RBP5.15□□□□□ -1.59
SPG11-221ENST00000560299 STX12Q86Y82 276 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 DYNAPQ8N1N2 210 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms