RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, human

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNB4-204	ENST00000559849	SSX9	Q7RTT3	188 aa		10.66	□□□□□ -0.7
CHRNB4-204	ENST00000559849	PUSL1	Q8N0Z8	303 aa	Known RBP	10.66	□□□□□ -0.7
CHRNB4-204	ENST00000559849	WFDC9	Q8NEX5	89 aa		10.66	□□□□□ -0.7
CHRNB4-204	ENST00000559849	TMEM167A	Q8TBQ9	72 aa		10.66	□□□□□ -0.7
CHRNB4-204	ENST00000559849	MYOZ3	Q8TDC0	251 aa		10.66	□□□□□ -0.7
CHRNB4-204	ENST00000559849	CITED4	Q96RK1	184 aa		10.66	□□□□□ -0.7
CHRNB4-204	ENST00000559849	LYRM1	O43325	122 aa		10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	KBTBD11	O94819	623 aa		10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	AKAIN1	P0CW23	69 aa		10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	HTR2B	P41595	481 aa		10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	KIAA0141	Q14154	515 aa	Predicted RBP	10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	MEGF8	Q7Z7M0	2845 aa		10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	ZNF491	Q8N8L2	437 aa		10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	SRSF12	Q8WXF0	261 aa	Known RBP	10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	POU2AF1	Q16633	256 aa		10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	SCGB2B2	Q4G0G5	96 aa		10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	NOXA1	Q86UR1	476 aa		10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	TOMM5	Q8N4H5	51 aa		10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	LHFPL5	Q8TAF8	219 aa		10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	ENKUR	Q8TC29	256 aa		10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	C4orf3	Q8WVX3	66 aa		10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	PHB2	Q99623	299 aa		10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	SPIN2A	Q99865	258 aa		10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	SPIN2B	Q9BPZ2	258 aa		10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	BET1L	Q9NYM9	111 aa		10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	COMMD9	Q9P000	198 aa		10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	VSIG4	Q9Y279	399 aa		10.65	□□□□□ -0.7
CHRNB4-204	ENST00000559849	PGAM2	P15259	253 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	CD33	P20138	364 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	MAS1L	P35410	378 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	MYCNOS	P40205	109 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	OR4A47	Q6IF82	309 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	ZNF767P	Q75MW2	155 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	TBC1D26	Q86UD7	250 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	TCTE3	Q8IZS6	198 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	OR5T1	Q8NG75	326 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	OR4A5	Q8NH83	315 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	SLC2A9	Q9NRM0	540 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	FAM212B	Q9NTI7	297 aa	Predicted RBP	10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	ANKRD20A5P	A0PJZ0	165 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	DISC1	C4P0D8	188 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	CCL24	O00175	119 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	S1PR2	O95136	353 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	ZNF735	P0CB33	412 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	LPAR6	P43657	344 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	RPL8	P62917	257 aa	Known RBP	10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	ASPHD1	Q5U4P2	390 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	DMBX1	Q8NFW5	382 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	ZFAND1	Q8TCF1	268 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	CASTOR1	Q8WTX7	329 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	MS4A10	Q96PG2	267 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	P2RX4	Q99571	388 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	HRASLS	Q9HDD0	168 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	ZNF355P	Q9NSJ1	428 aa		10.64	□□□□□ -0.71
CHRNB4-204	ENST00000559849	FAM240B	A0A1B0GVZ2	78 aa		10.63	□□□□□ -0.71
CHRNB4-204	ENST00000559849		H3BUA1	57 aa		10.63	□□□□□ -0.71
CHRNB4-204	ENST00000559849	MPPED1	O15442	326 aa		10.63	□□□□□ -0.71
CHRNB4-204	ENST00000559849	ECI1	P42126	302 aa		10.63	□□□□□ -0.71
CHRNB4-204	ENST00000559849	RND3	P61587	244 aa		10.63	□□□□□ -0.71
CHRNB4-204	ENST00000559849	ZNF585B	Q52M93	769 aa		10.63	□□□□□ -0.71
CHRNB4-204	ENST00000559849	PXDC1	Q5TGL8	231 aa		10.63	□□□□□ -0.71
CHRNB4-204	ENST00000559849	ETV3L	Q6ZN32	361 aa		10.63	□□□□□ -0.71
CHRNB4-204	ENST00000559849	MRPL41	Q8IXM3	137 aa	Known RBP	10.63	□□□□□ -0.71
CHRNB4-204	ENST00000559849	OR4C16	Q8NGL9	310 aa		10.63	□□□□□ -0.71
CHRNB4-204	ENST00000559849	RAX2	Q96IS3	184 aa		10.63	□□□□□ -0.71
CHRNB4-204	ENST00000559849	MARCH11	A6NNE9	402 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	BRI3	O95415	125 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	IL6R	P08887	468 aa	Predicted RBP	10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	APELA	P0DMC3	54 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	TPPP2	P59282	170 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	ERVK-16	P61578	105 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	RUNX1	Q01196	453 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	KLF9	Q13886	244 aa	Predicted RBP	10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	FAAP20	Q6NZ36	180 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	LINC00469	Q8N7U9	141 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	LINC00482	Q8N8I6	264 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	GNB4	Q9HAV0	340 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	FAM25E	A8MYX2	175 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849		I3L521	148 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	KRAS	P01116	189 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	FGF2	P09038	288 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	HLA-G	P17693	338 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	PI3	P19957	117 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	RPL27A	P46776	148 aa	Known RBP	10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	PIGP	P57054	158 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	DEFB136	Q30KP8	78 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	C10orf55	Q5SWW7	151 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	DUSP18	Q8NEJ0	188 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	OR11H1	Q8NG94	326 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	MARCH1	Q8TCQ1	289 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	PRRT1	Q99946	306 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	TMEM140	Q9NV12	185 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	BOLA1	Q9Y3E2	137 aa		10.62	□□□□□ -0.71
CHRNB4-204	ENST00000559849	UPK2	O00526	184 aa		10.61	□□□□□ -0.71
CHRNB4-204	ENST00000559849	TRGV3	P03979	118 aa		10.61	□□□□□ -0.71
CHRNB4-204	ENST00000559849	OR9G9	P0C7N8	305 aa		10.61	□□□□□ -0.71
CHRNB4-204	ENST00000559849	AP3S2	P59780	193 aa		10.61	□□□□□ -0.71
CHRNB4-204	ENST00000559849	SURF2	Q15527	256 aa	Predicted RBP	10.61	□□□□□ -0.71
CHRNB4-204	ENST00000559849	PLET1	Q6UQ28	207 aa		10.61	□□□□□ -0.71
CHRNB4-204	ENST00000559849	OR13C8	Q8NGS7	320 aa		10.61	□□□□□ -0.71

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