RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 IFNA17P01571 189 aa8.3□□□□□ -1.08
TPM1-221ENST00000559831 IL6RP08887 468 aaPredicted RBP8.3□□□□□ -1.08
TPM1-221ENST00000559831 NKX2-1P43699 371 aaPredicted RBP8.3□□□□□ -1.08
TPM1-221ENST00000559831 CYCSP99999 105 aaKnown RBP8.3□□□□□ -1.08
TPM1-221ENST00000559831 CXorf66Q5JRM2 361 aaPredicted RBP8.3□□□□□ -1.08
TPM1-221ENST00000559831 C9orf152Q5JTZ5 239 aa8.3□□□□□ -1.08
TPM1-221ENST00000559831 C10orf55Q5SWW7 151 aa8.3□□□□□ -1.08
TPM1-221ENST00000559831 C16orf82Q7Z2V1 217 aa8.3□□□□□ -1.08
TPM1-221ENST00000559831 PPP1R27Q86WC6 154 aa8.3□□□□□ -1.08
TPM1-221ENST00000559831 FAM71E2Q8N5Q1 922 aa8.3□□□□□ -1.08
TPM1-221ENST00000559831 C5orf56Q8N8D9 126 aa8.3□□□□□ -1.08
TPM1-221ENST00000559831 OR4D5Q8NGN0 318 aa8.3□□□□□ -1.08
TPM1-221ENST00000559831 ZNF418Q8TF45 676 aaPredicted RBP8.3□□□□□ -1.08
TPM1-221ENST00000559831 ABHD5Q8WTS1 349 aa8.3□□□□□ -1.08
TPM1-221ENST00000559831 COMMD5Q9GZQ3 224 aa8.3□□□□□ -1.08
TPM1-221ENST00000559831 MAGT1Q9H0U3 335 aa8.3□□□□□ -1.08
TPM1-221ENST00000559831 COA4Q9NYJ1 87 aa8.3□□□□□ -1.08
TPM1-221ENST00000559831 FOXA2Q9Y261 457 aaPredicted RBP8.3□□□□□ -1.08
TPM1-221ENST00000559831 ANK3Q12955 4377 aaKnown RBP8.29□□□□□ -1.08
TPM1-221ENST00000559831 TEX50A0A1B0GTY4 177 aa8.29□□□□□ -1.08
TPM1-221ENST00000559831 DNAJC9-AS1A6NH13 148 aa8.29□□□□□ -1.08
TPM1-221ENST00000559831 CEBPZOSA8MTT3 80 aa8.29□□□□□ -1.08
TPM1-221ENST00000559831 SMLR1H3BR10 107 aa8.29□□□□□ -1.08
TPM1-221ENST00000559831 WRBO00258 174 aa8.29□□□□□ -1.08
TPM1-221ENST00000559831 FGF16O43320 207 aa8.29□□□□□ -1.08
TPM1-221ENST00000559831 PITX3O75364 302 aa8.29□□□□□ -1.08
TPM1-221ENST00000559831 MBPP02686 304 aaPredicted RBP8.29□□□□□ -1.08
TPM1-221ENST00000559831 RPL27AP46776 148 aaKnown RBP8.29□□□□□ -1.08
TPM1-221ENST00000559831 RAP2BP61225 183 aa8.29□□□□□ -1.08
TPM1-221ENST00000559831 SRSF4Q08170 494 aaKnown RBP8.29□□□□□ -1.08
TPM1-221ENST00000559831 RAB32Q13637 225 aa8.29□□□□□ -1.08
TPM1-221ENST00000559831 MRGPRG-AS1Q2M3A8 158 aa8.29□□□□□ -1.08
TPM1-221ENST00000559831 TUSC1Q2TAM9 212 aa8.29□□□□□ -1.08
TPM1-221ENST00000559831 ST6GAL2Q96JF0 529 aa8.29□□□□□ -1.08
TPM1-221ENST00000559831 FYTTD1Q96QD9 318 aaKnown RBP8.29□□□□□ -1.08
TPM1-221ENST00000559831 RBKSQ9H477 322 aa8.29□□□□□ -1.08
TPM1-221ENST00000559831 TMEM14BQ9NUH8 114 aa8.29□□□□□ -1.08
TPM1-221ENST00000559831 FKBP11Q9NYL4 201 aa8.29□□□□□ -1.08
TPM1-221ENST00000559831 RCL1Q9Y2P8 373 aaKnown RBP8.29□□□□□ -1.08
TPM1-221ENST00000559831 POMT1Q9Y6A1 747 aa8.29□□□□□ -1.08
TPM1-221ENST00000559831 K7EPK0 472 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 M0QZK8 103 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 SSSCA1O60232 199 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 CRLF1O75462 422 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 HLA-DRB1P01911 266 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 FGF2P09038 288 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 FAM157CP0CG43 387 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 IAPPP10997 89 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 MAS1LP35410 378 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 HOXA1P49639 335 aaPredicted RBP8.28□□□□□ -1.08
TPM1-221ENST00000559831 COMPP49747 757 aaPredicted RBP8.28□□□□□ -1.08
TPM1-221ENST00000559831 HSPE1P61604 102 aaKnown RBP8.28□□□□□ -1.08
TPM1-221ENST00000559831 POLR2GP62487 172 aaKnown RBP eCLIP8.28□□□□□ -1.08
TPM1-221ENST00000559831 TNFRSF9Q07011 255 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 CD300CQ08708 224 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 FXYD3Q14802 87 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 ZNF429Q86V71 674 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 TMEM86BQ8N661 226 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 OR1L8Q8NGR8 309 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 OR2T35Q8NGX2 323 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 GRPEL2Q8TAA5 225 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 PPP1R1CQ8WVI7 109 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 ASB13Q8WXK3 278 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 HSPB9Q9BQS6 159 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 ENY2Q9NPA8 101 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 ESM1Q9NQ30 184 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 HSPB7Q9UBY9 170 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 MTORP42345 2549 aa8.28□□□□□ -1.08
TPM1-221ENST00000559831 FAM90A26D6RGX4 464 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 L7N2F9 121 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 SYNGR2O43760 224 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 GPR137BO60478 399 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 MED6O75586 246 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 AMY1AP04745 511 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 APELAP0DMC3 54 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 PSMB6P28072 239 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 SPCS3P61009 180 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 VAMP2P63027 116 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 CX3CL1P78423 397 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 SSBP2P81877 361 aaPredicted RBP8.27□□□□□ -1.09
TPM1-221ENST00000559831 PRCDQ00LT1 54 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 ID3Q02535 119 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 IL15RAQ13261 267 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 C11orf87Q6NUJ2 197 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 OR5B3Q8NH48 314 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 OR52E5Q8NH55 327 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 SRSF12Q8WXF0 261 aaKnown RBP8.27□□□□□ -1.09
TPM1-221ENST00000559831 ARPC1AQ92747 370 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 NEURL2Q9BR09 285 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 FAM103A1Q9BTL3 118 aaKnown RBP8.27□□□□□ -1.09
TPM1-221ENST00000559831 PLEKHA3Q9HB20 300 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 PARP11Q9NR21 331 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 ZFP57Q9NU63 452 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 ZNF257Q9Y2Q1 563 aa8.27□□□□□ -1.09
TPM1-221ENST00000559831 FN1P02751 2386 aaKnown RBP8.27□□□□□ -1.09
TPM1-221ENST00000559831 TRAV14DV4A0A0A6YYC5 116 aa8.26□□□□□ -1.09
TPM1-221ENST00000559831 IGHV7-81A0A0B4J1V7 117 aa8.26□□□□□ -1.09
TPM1-221ENST00000559831 E7EUB6 86 aa8.26□□□□□ -1.09
TPM1-221ENST00000559831 MPC2O95563 127 aa8.26□□□□□ -1.09
TPM1-221ENST00000559831 RLN2P04090 185 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms