RNA–Protein interactions for RNA: ENST00000559119.1

VPS13C-208, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-208ENST00000559119 COCHO43405 550 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 FCMRO60667 390 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 ALOX12BO75342 701 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 DEDDO75618 318 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 CNMDO75829 334 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 SLC25A14O95258 325 aaPredicted RBP2.02□□□□□ -2.09
VPS13C-208ENST00000559119 EPPINO95925 133 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 CYB5AP00167 134 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 HBE1P02100 147 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 CRYGCP07315 174 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 ERCC1P07992 297 aaPredicted RBP2.02□□□□□ -2.09
VPS13C-208ENST00000559119 TACSTD2P09758 323 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 OR5G3P0C626 314 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 OR13C7P0DN81 318 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 PTHLHP12272 177 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 HMGA1P17096 107 aaKnown RBP2.02□□□□□ -2.09
VPS13C-208ENST00000559119 TCN2P20062 427 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 PGCP20142 388 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 IMPA1P29218 277 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 RPL12P30050 165 aaKnown RBP2.02□□□□□ -2.09
VPS13C-208ENST00000559119 CSNK1A1P48729 337 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 SLC11A1P49279 550 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 PRRX1P54821 245 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 EMP2P54851 167 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 BIDP55957 195 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 RPL23AP62750 156 aaKnown RBP2.02□□□□□ -2.09
VPS13C-208ENST00000559119 RPS15P62841 145 aaKnown RBP2.02□□□□□ -2.09
VPS13C-208ENST00000559119 BTG2P78543 158 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 LCN2P80188 198 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 ZNF117Q03924 483 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 ZNF235Q14590 738 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 C5orf64Q2M2E5 130 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 PDZD11Q5EBL8 140 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 ACTL10Q5JWF8 245 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 CASC10Q5T4H9 136 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 ZNF684Q5T5D7 378 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 PIP5KL1Q5T9C9 394 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 FKBP1CQ5VVH2 108 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 FAM71F2Q6NXP2 309 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 DNM1P34Q6PK57 102 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 TMEM220Q6QAJ8 160 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 TOMM20LQ6UXN7 152 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 RBM45Q8IUH3 476 aaKnown RBP2.02□□□□□ -2.09
VPS13C-208ENST00000559119 CYB561A3Q8NBI2 242 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 OR4C5Q8NGB2 326 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 OR52L1Q8NGH7 329 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 OR5L1Q8NGL2 311 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 OR1L6Q8NGR2 347 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 MFSD8Q8NHS3 518 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 EMG1Q92979 244 aaKnown RBP2.02□□□□□ -2.09
VPS13C-208ENST00000559119 ADIPOR1Q96A54 375 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 CIB3Q96Q77 187 aaPredicted RBP2.02□□□□□ -2.09
VPS13C-208ENST00000559119 SLC6A7Q99884 636 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 GABRG3Q99928 467 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 WFDC6Q9BQY6 131 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 AGMATQ9BSE5 352 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 C20orf24Q9BUV8 137 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 EBPLQ9BY08 206 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 SRXN1Q9BYN0 137 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 OR11A1Q9GZK7 315 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 MAP1LC3BQ9GZQ8 125 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 CST11Q9H112 138 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 NXF5Q9H1B4 397 aaKnown RBP2.02□□□□□ -2.09
VPS13C-208ENST00000559119 ELOVL3Q9HB03 270 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 OR2S2Q9NQN1 319 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 TMEM106BQ9NUM4 274 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 KLHL28Q9NXS3 571 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 BET1LQ9NYM9 111 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 UQCR10Q9UDW1 63 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 NAT8Q9UHE5 227 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 ANK1P16157 1881 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 RALGAPA2Q2PPJ7 1873 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 PHIPQ8WWQ0 1821 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 WDR90Q96KV7 1748 aa2.02□□□□□ -2.09
VPS13C-208ENST00000559119 CHD5Q8TDI0 1954 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 MYLKQ15746 1914 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 NYNRINQ9P2P1 1898 aaKnown RBP2.01□□□□□ -2.09
VPS13C-208ENST00000559119 COL14A1Q05707 1796 aaKnown RBP2.01□□□□□ -2.09
VPS13C-208ENST00000559119 IGHV1-69-2A0A0G2JMI3 117 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 LOC100131303A0A0U1RQF7 123 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 TMEM212A6NML5 194 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 OR4C45A6NMZ5 311 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 RIIAD1A6NNX1 92 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 ZNF705FA8MVS1 300 aaPredicted RBP2.01□□□□□ -2.09
VPS13C-208ENST00000559119 G3V4G9 280 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 TRAPPC2LH3BP13 241 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 CORTO00230 105 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 GEMIN2O14893 280 aaKnown RBP2.01□□□□□ -2.09
VPS13C-208ENST00000559119 AGPAT2O15120 278 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 ARPC3O15145 178 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 B4GALT2O60909 372 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 MMP7P09237 267 aaPredicted RBP2.01□□□□□ -2.09
VPS13C-208ENST00000559119 OR4Q2P0C623 313 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 ZNF705DP0CH99 300 aaPredicted RBP2.01□□□□□ -2.09
VPS13C-208ENST00000559119 ZNF705BP0CI00 300 aaPredicted RBP2.01□□□□□ -2.09
VPS13C-208ENST00000559119 SMIM17P0DL12 118 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 CTSEP14091 401 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 IL9P15248 144 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 CRISP2P16562 243 aa2.01□□□□□ -2.09
VPS13C-208ENST00000559119 ZNF708P17019 499 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms