RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 ZNF675Q8TD23 568 aa1.23□□□□□ -2.21
GABPB1-209ENST00000559100 CT55Q8WUE5 264 aa1.23□□□□□ -2.21
GABPB1-209ENST00000559100 AP3S1Q92572 193 aa1.23□□□□□ -2.21
GABPB1-209ENST00000559100 TMEM147Q9BVK8 224 aa1.23□□□□□ -2.21
GABPB1-209ENST00000559100 TLNRD1Q9H1K6 362 aa1.23□□□□□ -2.21
GABPB1-209ENST00000559100 EFCAB1Q9HAE3 211 aa1.23□□□□□ -2.21
GABPB1-209ENST00000559100 UQCC1Q9NVA1 299 aa1.23□□□□□ -2.21
GABPB1-209ENST00000559100 MRPL27Q9P0M9 148 aaKnown RBP1.23□□□□□ -2.21
GABPB1-209ENST00000559100 RSL24D1Q9UHA3 163 aaKnown RBP1.23□□□□□ -2.21
GABPB1-209ENST00000559100 NAT8Q9UHE5 227 aa1.23□□□□□ -2.21
GABPB1-209ENST00000559100 FUT9Q9Y231 359 aa1.23□□□□□ -2.21
GABPB1-209ENST00000559100 KLK5Q9Y337 293 aaPredicted RBP1.23□□□□□ -2.21
GABPB1-209ENST00000559100 TIMM9Q9Y5J7 89 aa1.23□□□□□ -2.21
GABPB1-209ENST00000559100 NUP160Q12769 1436 aa1.23□□□□□ -2.21
GABPB1-209ENST00000559100 WRNQ14191 1432 aaPredicted RBP eCLIP1.23□□□□□ -2.21
GABPB1-209ENST00000559100 PRR14LQ5THK1 2151 aa1.23□□□□□ -2.21
GABPB1-209ENST00000559100 TTC21AQ8NDW8 1320 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 IGLV10-54A0A075B6I4 117 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 hCG_1818297A0A087WSY0 165 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 TRAV26-2A0A0B4J265 109 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 hADV38S2A0JD32 116 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 A8MT66 165 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 E5RI56 91 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 H3BT86 120 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 LEPROTO15243 131 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 OR2B3O76000 313 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 OR5F1O95221 314 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 HAND1O96004 215 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 SMIM17P0DL12 118 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 COL8A2P25067 703 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 MSNP26038 577 aaKnown RBP1.22□□□□□ -2.21
GABPB1-209ENST00000559100 EIF2B2P49770 351 aaKnown RBP1.22□□□□□ -2.21
GABPB1-209ENST00000559100 SERPINB9P50453 376 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 RBM11P57052 281 aaKnown RBP1.22□□□□□ -2.21
GABPB1-209ENST00000559100 RPL19P84098 196 aaKnown RBP1.22□□□□□ -2.21
GABPB1-209ENST00000559100 MEF2BQ02080 365 aaPredicted RBP1.22□□□□□ -2.21
GABPB1-209ENST00000559100 TAF9Q16594 264 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 MIAQ16674 131 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 ARHGAP11BQ3KRB8 267 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 TMED4Q7Z7H5 227 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 LHFPL1Q86WI0 220 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 OOSP2Q86WS3 158 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 PXT1Q8NFP0 134 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 OR4X2Q8NGF9 303 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 OR8B12Q8NGG6 310 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 OR51T1Q8NGJ9 327 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 OR4C16Q8NGL9 310 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 OR10X1Q8NGY0 326 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 OR5J2Q8NH18 312 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 MRPL30Q8TCC3 161 aaKnown RBP1.22□□□□□ -2.21
GABPB1-209ENST00000559100 SMCR5Q8TEV8 140 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 DNAJC9Q8WXX5 260 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 ANP32BQ92688 251 aaKnown RBP1.22□□□□□ -2.21
GABPB1-209ENST00000559100 SELENOSQ9BQE4 189 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 RNASE7Q9H1E1 156 aaKnown RBP1.22□□□□□ -2.21
GABPB1-209ENST00000559100 C11orf68Q9H3H3 251 aaKnown RBP1.22□□□□□ -2.21
GABPB1-209ENST00000559100 CISHQ9NSE2 258 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 FBXL12Q9NXK8 326 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 IL36BQ9NZH7 164 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 TMEM56-RWDD3S4R434 201 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 CCDC144AA2RUR9 1427 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 LTBP4Q8N2S1 1624 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 ATAD5Q96QE3 1844 aa1.22□□□□□ -2.21
GABPB1-209ENST00000559100 MTUS2Q5JR59 1369 aa1.21□□□□□ -2.21
GABPB1-209ENST00000559100 COL18A1P39060 1754 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 OTOFQ9HC10 1997 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 DSCAML1Q8TD84 2053 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 TRGV5A0A0B4J1U4 118 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 IGHV3-15A0A0B4J1V0 119 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 TRAV38-1A0A0B4J264 116 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 A0A0J9YW62 118 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 EXOC1LA0A1B0GW35 172 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 DPRXA6NFQ7 191 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 RFPL4AA6NLU0 287 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 RFPL4AL1F8VTS6 287 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 SLC22A1O15245 554 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 ZNF73O43830 326 aaPredicted RBP1.21□□□□□ -2.22
GABPB1-209ENST00000559100 PPBPP02775 128 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 PRM2P04554 102 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 SERPINE1P05121 402 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 CST2P09228 141 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 RBP1P09455 135 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 P0C880 135 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 ZNF728P0DKX0 622 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 SULT1A3P0DMM9 295 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 SULT1A4P0DMN0 295 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 HIST1H2BOP23527 126 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 G0S2P27469 103 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 HLA-DMBP28068 263 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 HIST1H2BBP33778 126 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 GNG10P50151 68 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 HIST1H2BDP58876 126 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 DEFA3P59666 94 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 HIST1H2BCP62807 126 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 ERHP84090 104 aaKnown RBP1.21□□□□□ -2.22
GABPB1-209ENST00000559100 RUNX1Q01196 453 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 HIST2H2BEQ16778 126 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 IAH1Q2TAA2 248 aaPredicted RBP1.21□□□□□ -2.22
GABPB1-209ENST00000559100 KRTAP13-3Q3SY46 172 aa1.21□□□□□ -2.22
GABPB1-209ENST00000559100 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms