RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 NAV1Q8NEY1 1877 aa1.88□□□□□ -2.11
CASC4-206ENST00000558847 TRBV20OR9-2A0A075B6H5 130 aa1.87□□□□□ -2.11
CASC4-206ENST00000558847 TRAV7A0A075B6U4 112 aa1.87□□□□□ -2.11
CASC4-206ENST00000558847 A0A0G2JQZ4 141 aa1.87□□□□□ -2.11
CASC4-206ENST00000558847 PQLC2LA1A4F0 135 aa1.87□□□□□ -2.11
CASC4-206ENST00000558847 IRGMA1A4Y4 181 aa1.87□□□□□ -2.11
CASC4-206ENST00000558847 CLDN24A6NM45 220 aa1.87□□□□□ -2.11
CASC4-206ENST00000558847 H7C2G1 150 aa1.87□□□□□ -2.11
CASC4-206ENST00000558847 J3QKU1 62 aa1.87□□□□□ -2.11
CASC4-206ENST00000558847 KPNA3O00505 521 aaPredicted RBP1.87□□□□□ -2.11
CASC4-206ENST00000558847 DSCAMO60469 2012 aa1.87□□□□□ -2.11
CASC4-206ENST00000558847 RAB14P61106 215 aa1.87□□□□□ -2.11
CASC4-206ENST00000558847 DEFB103AP81534 67 aa1.87□□□□□ -2.11
CASC4-206ENST00000558847 ACOT6Q3I5F7 207 aaPredicted RBP1.87□□□□□ -2.11
CASC4-206ENST00000558847 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
CASC4-206ENST00000558847 TMEM42Q69YG0 159 aa1.87□□□□□ -2.11
CASC4-206ENST00000558847 RPP25LQ8N5L8 163 aaKnown RBP1.87□□□□□ -2.11
CASC4-206ENST00000558847 TMEM86BQ8N661 226 aa1.87□□□□□ -2.11
CASC4-206ENST00000558847 CLDN22Q8N7P3 220 aa1.87□□□□□ -2.11
CASC4-206ENST00000558847 OR51D1Q8NGF3 324 aa1.87□□□□□ -2.11
CASC4-206ENST00000558847 OR8B12Q8NGG6 310 aa1.87□□□□□ -2.11
CASC4-206ENST00000558847 OR51T1Q8NGJ9 327 aa1.87□□□□□ -2.11
CASC4-206ENST00000558847 RNASE11Q8TAA1 199 aaKnown RBP1.87□□□□□ -2.11
CASC4-206ENST00000558847 PAQR5Q9NXK6 330 aaPredicted RBP1.87□□□□□ -2.11
CASC4-206ENST00000558847 SLC22A13Q9Y226 551 aa1.87□□□□□ -2.11
CASC4-206ENST00000558847 MEIKINA0A087WXM9 373 aa1.86□□□□□ -2.11
CASC4-206ENST00000558847 TMSB15BA0A087X1C1 80 aa1.86□□□□□ -2.11
CASC4-206ENST00000558847 INMT-MINDY4F8WBC2 141 aa1.86□□□□□ -2.11
CASC4-206ENST00000558847 LEPROTO15243 131 aa1.86□□□□□ -2.11
CASC4-206ENST00000558847 NSA2O95478 260 aaKnown RBP1.86□□□□□ -2.11
CASC4-206ENST00000558847 IGKV1-16P04430 117 aa1.86□□□□□ -2.11
CASC4-206ENST00000558847 SERPINA7P05543 415 aa1.86□□□□□ -2.11
CASC4-206ENST00000558847 RPS17P08708 135 aaKnown RBP1.86□□□□□ -2.11
CASC4-206ENST00000558847 LGALS1P09382 135 aaKnown RBP1.86□□□□□ -2.11
CASC4-206ENST00000558847 PEBP1P30086 187 aaKnown RBP1.86□□□□□ -2.11
CASC4-206ENST00000558847 KRTAP12-3P60328 96 aa1.86□□□□□ -2.11
CASC4-206ENST00000558847 FADDQ13158 208 aa1.86□□□□□ -2.11
CASC4-206ENST00000558847 SPA17Q15506 151 aa1.86□□□□□ -2.11
CASC4-206ENST00000558847 ALKAL1Q6UXT8 129 aa1.86□□□□□ -2.11
CASC4-206ENST00000558847 KLF6Q99612 283 aaPredicted RBP1.86□□□□□ -2.11
CASC4-206ENST00000558847 ULBP3Q9BZM4 244 aa1.86□□□□□ -2.11
CASC4-206ENST00000558847 CHST6Q9GZX3 395 aa1.86□□□□□ -2.11
CASC4-206ENST00000558847 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.86□□□□□ -2.11
CASC4-206ENST00000558847 FUT9Q9Y231 359 aa1.86□□□□□ -2.11
CASC4-206ENST00000558847 ICE1Q9Y2F5 2266 aa1.86□□□□□ -2.11
CASC4-206ENST00000558847 REREQ9P2R6 1566 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 TGIF2-C20orf24A0A0A6YYL0 155 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 TRAV38-1A0A0B4J264 116 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 IGHV1-18A0A0C4DH31 117 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 RFPL4AA6NLU0 287 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 RFPL4AL1F8VTS6 287 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 F8W036 122 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 H3BT86 120 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 GPX1P07203 203 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 SULT1A3P0DMM9 295 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 SULT1A4P0DMN0 295 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 HIST1H1TP22492 207 aaPredicted RBP1.85□□□□□ -2.11
CASC4-206ENST00000558847 RPL28P46779 137 aaKnown RBP1.85□□□□□ -2.11
CASC4-206ENST00000558847 CCL20P78556 96 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 RPL18Q07020 188 aaKnown RBP1.85□□□□□ -2.11
CASC4-206ENST00000558847 AESQ08117 197 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 EDDM3AQ14507 147 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 GUK1Q16774 197 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 IBA57Q5T440 356 aaKnown RBP1.85□□□□□ -2.11
CASC4-206ENST00000558847 Q6ZS49 121 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 KTN1-AS1Q86SY8 53 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 C10orf126Q8N4M7 172 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 MCFD2Q8NI22 146 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 MRPL30Q8TCC3 161 aaKnown RBP1.85□□□□□ -2.11
CASC4-206ENST00000558847 BORCS7Q96B45 105 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 C8orf76Q96K31 380 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 ERMAPQ96PL5 475 aaPredicted RBP1.85□□□□□ -2.11
CASC4-206ENST00000558847 WDR61Q9GZS3 305 aaKnown RBP1.85□□□□□ -2.11
CASC4-206ENST00000558847 VCX3BQ9H321 246 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 EFCAB1Q9HAE3 211 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 NAT8Q9UHE5 227 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 RBM7Q9Y580 266 aaKnown RBP1.85□□□□□ -2.11
CASC4-206ENST00000558847 ADGRB3O60242 1522 aa1.85□□□□□ -2.11
CASC4-206ENST00000558847 COL4A2P08572 1712 aa1.84□□□□□ -2.11
CASC4-206ENST00000558847 A0A0J9YY10 115 aa1.84□□□□□ -2.11
CASC4-206ENST00000558847 A0A1B0GX78 115 aa1.84□□□□□ -2.11
CASC4-206ENST00000558847 ZNF860A6NHJ4 632 aa1.84□□□□□ -2.11
CASC4-206ENST00000558847 OVOL1O14753 267 aa1.84□□□□□ -2.11
CASC4-206ENST00000558847 SLC22A1O15245 554 aa1.84□□□□□ -2.11
CASC4-206ENST00000558847 CHP2O43745 196 aa1.84□□□□□ -2.11
CASC4-206ENST00000558847 HLA-DRB1P01911 266 aa1.84□□□□□ -2.11
CASC4-206ENST00000558847 PRM2P04554 102 aa1.84□□□□□ -2.11
CASC4-206ENST00000558847 TFPTP0C1Z6 253 aa1.84□□□□□ -2.11
CASC4-206ENST00000558847 CCL5P13501 91 aa1.84□□□□□ -2.11
CASC4-206ENST00000558847 SNRPD2P62316 118 aaKnown RBP1.84□□□□□ -2.11
CASC4-206ENST00000558847 CCL7P80098 99 aa1.84□□□□□ -2.11
CASC4-206ENST00000558847 SRSF6Q13247 344 aaKnown RBP1.84□□□□□ -2.11
CASC4-206ENST00000558847 HES1Q14469 280 aa1.84□□□□□ -2.11
CASC4-206ENST00000558847 NDUFA5Q16718 116 aa1.84□□□□□ -2.11
CASC4-206ENST00000558847 ZNF791Q3KP31 576 aaPredicted RBP1.84□□□□□ -2.11
CASC4-206ENST00000558847 LPCAT3Q6P1A2 487 aa1.84□□□□□ -2.11
CASC4-206ENST00000558847 RPL22L1Q6P5R6 122 aaKnown RBP1.84□□□□□ -2.11
CASC4-206ENST00000558847 TMEM86AQ8N2M4 240 aa1.84□□□□□ -2.11
CASC4-206ENST00000558847 ZNF676Q8N7Q3 588 aa1.84□□□□□ -2.11
CASC4-206ENST00000558847 CMSS1Q9BQ75 279 aaKnown RBP1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms