RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 COMMD5Q9GZQ3 224 aa11.86□□□□□ -0.51
VPS18-202ENST00000558474 FBXL15Q9H469 300 aa11.86□□□□□ -0.51
VPS18-202ENST00000558474 OR51B2Q9Y5P1 312 aa11.86□□□□□ -0.51
VPS18-202ENST00000558474 SOX21Q9Y651 276 aaPredicted RBP11.86□□□□□ -0.51
VPS18-202ENST00000558474 NOTCH2Q04721 2471 aa11.85□□□□□ -0.51
VPS18-202ENST00000558474 K7EPK0 472 aa11.85□□□□□ -0.51
VPS18-202ENST00000558474 DEDDO75618 318 aa11.85□□□□□ -0.51
VPS18-202ENST00000558474 ACTL6BO94805 426 aa11.85□□□□□ -0.51
VPS18-202ENST00000558474 IFNA17P01571 189 aa11.85□□□□□ -0.51
VPS18-202ENST00000558474 SRD5A1P18405 259 aa11.85□□□□□ -0.51
VPS18-202ENST00000558474 TAS2R30P59541 319 aa11.85□□□□□ -0.51
VPS18-202ENST00000558474 PRCDQ00LT1 54 aa11.85□□□□□ -0.51
VPS18-202ENST00000558474 CXorf66Q5JRM2 361 aaPredicted RBP11.85□□□□□ -0.51
VPS18-202ENST00000558474 C11orf87Q6NUJ2 197 aa11.85□□□□□ -0.51
VPS18-202ENST00000558474 TMEM65Q6PI78 240 aa11.85□□□□□ -0.51
VPS18-202ENST00000558474 ZNF562Q6V9R5 426 aa11.85□□□□□ -0.51
VPS18-202ENST00000558474 RBMS3Q6XE24 437 aaKnown RBP11.85□□□□□ -0.51
VPS18-202ENST00000558474 IL17RELQ6ZVW7 336 aa11.85□□□□□ -0.51
VPS18-202ENST00000558474 HSD17B13Q7Z5P4 300 aaPredicted RBP11.85□□□□□ -0.51
VPS18-202ENST00000558474 MRPL41Q8IXM3 137 aaKnown RBP11.85□□□□□ -0.51
VPS18-202ENST00000558474 C22orf15Q8WYQ4 148 aa11.85□□□□□ -0.51
VPS18-202ENST00000558474 SMR3AQ99954 134 aa11.85□□□□□ -0.51
VPS18-202ENST00000558474 QTRT1Q9BXR0 403 aaKnown RBP11.85□□□□□ -0.51
VPS18-202ENST00000558474 VPREB3Q9UKI3 123 aa11.85□□□□□ -0.51
VPS18-202ENST00000558474 NSG2Q9Y328 171 aa11.85□□□□□ -0.51
VPS18-202ENST00000558474 TEX50A0A1B0GTY4 177 aa11.84□□□□□ -0.51
VPS18-202ENST00000558474 MDFIC2A0A1B0GVS7 189 aa11.84□□□□□ -0.51
VPS18-202ENST00000558474 A0A1W2PN81 502 aa11.84□□□□□ -0.51
VPS18-202ENST00000558474 HMSDA8MTL9 139 aa11.84□□□□□ -0.51
VPS18-202ENST00000558474 E5RGE8 158 aa11.84□□□□□ -0.51
VPS18-202ENST00000558474 G3V3Q6 166 aa11.84□□□□□ -0.51
VPS18-202ENST00000558474 SCGB1D2O95969 90 aa11.84□□□□□ -0.51
VPS18-202ENST00000558474 IGHV4-59P01825 116 aa11.84□□□□□ -0.51
VPS18-202ENST00000558474 CHRNA7P36544 502 aa11.84□□□□□ -0.51
VPS18-202ENST00000558474 COMPP49747 757 aaPredicted RBP11.84□□□□□ -0.51
VPS18-202ENST00000558474 ATP5IP56385 69 aaPredicted RBP11.84□□□□□ -0.51
VPS18-202ENST00000558474 OR2B8PP59922 312 aa11.84□□□□□ -0.51
VPS18-202ENST00000558474 FBLN7Q53RD9 439 aa11.84□□□□□ -0.51
VPS18-202ENST00000558474 C5orf56Q8N8D9 126 aa11.84□□□□□ -0.51
VPS18-202ENST00000558474 WDR89Q96FK6 387 aaPredicted RBP11.84□□□□□ -0.51
VPS18-202ENST00000558474 SMIM8Q96KF7 97 aa11.84□□□□□ -0.51
VPS18-202ENST00000558474 HYLS1Q96M11 299 aa11.84□□□□□ -0.51
VPS18-202ENST00000558474 CLCC1Q96S66 551 aa11.84□□□□□ -0.51
VPS18-202ENST00000558474 NDUFA4L2Q9NRX3 87 aa11.84□□□□□ -0.51
VPS18-202ENST00000558474 WSB1Q9Y6I7 421 aa11.84□□□□□ -0.51
VPS18-202ENST00000558474 TRAV14DV4A0A0A6YYC5 116 aa11.83□□□□□ -0.52
VPS18-202ENST00000558474 GPR137BO60478 399 aa11.83□□□□□ -0.52
VPS18-202ENST00000558474 S100A10P60903 97 aa11.83□□□□□ -0.52
VPS18-202ENST00000558474 POLR2GP62487 172 aaKnown RBP eCLIP11.83□□□□□ -0.52
VPS18-202ENST00000558474 ZFP69Q49AA0 526 aa11.83□□□□□ -0.52
VPS18-202ENST00000558474 LRRC37A5PQ49AS3 106 aa11.83□□□□□ -0.52
VPS18-202ENST00000558474 SIGLECL1Q8N7X8 197 aa11.83□□□□□ -0.52
VPS18-202ENST00000558474 DTD1Q8TEA8 209 aa11.83□□□□□ -0.52
VPS18-202ENST00000558474 RBMXL1Q96E39 390 aaKnown RBP11.83□□□□□ -0.52
VPS18-202ENST00000558474 RNF126Q9BV68 326 aa11.83□□□□□ -0.52
VPS18-202ENST00000558474 HIPK2Q9H2X6 1198 aa11.83□□□□□ -0.52
VPS18-202ENST00000558474 RBKSQ9H477 322 aa11.83□□□□□ -0.52
VPS18-202ENST00000558474 TPSG1Q9NRR2 321 aa11.83□□□□□ -0.52
VPS18-202ENST00000558474 RCL1Q9Y2P8 373 aaKnown RBP11.83□□□□□ -0.52
VPS18-202ENST00000558474 LSM5Q9Y4Y9 91 aaKnown RBP11.83□□□□□ -0.52
VPS18-202ENST00000558474 CSPG4Q6UVK1 2322 aa11.82□□□□□ -0.52
VPS18-202ENST00000558474 CEBPZOSA8MTT3 80 aa11.82□□□□□ -0.52
VPS18-202ENST00000558474 CLDN34H7C241 214 aa11.82□□□□□ -0.52
VPS18-202ENST00000558474 L7N2F9 121 aa11.82□□□□□ -0.52
VPS18-202ENST00000558474 HOXA3O43365 443 aaPredicted RBP11.82□□□□□ -0.52
VPS18-202ENST00000558474 CHST1O43916 411 aa11.82□□□□□ -0.52
VPS18-202ENST00000558474 SCAF4O95104 1147 aaKnown RBP11.82□□□□□ -0.52
VPS18-202ENST00000558474 CA2P00918 260 aa11.82□□□□□ -0.52
VPS18-202ENST00000558474 RPL27AP46776 148 aaKnown RBP11.82□□□□□ -0.52
VPS18-202ENST00000558474 P2RY1P47900 373 aa11.82□□□□□ -0.52
VPS18-202ENST00000558474 RPL23AP62750 156 aaKnown RBP11.82□□□□□ -0.52
VPS18-202ENST00000558474 VAMP2P63027 116 aa11.82□□□□□ -0.52
VPS18-202ENST00000558474 RPP30P78346 268 aaKnown RBP11.82□□□□□ -0.52
VPS18-202ENST00000558474 PJVKQ0ZLH3 352 aa11.82□□□□□ -0.52
VPS18-202ENST00000558474 TNXAQ16473 311 aa11.82□□□□□ -0.52
VPS18-202ENST00000558474 C11orf1Q9H5F2 150 aa11.82□□□□□ -0.52
VPS18-202ENST00000558474 PLEKHA3Q9HB20 300 aa11.82□□□□□ -0.52
VPS18-202ENST00000558474 ENY2Q9NPA8 101 aa11.82□□□□□ -0.52
VPS18-202ENST00000558474 TET2Q6N021 2002 aaPredicted RBP11.81□□□□□ -0.52
VPS18-202ENST00000558474 CELSR1Q9NYQ6 3014 aa11.81□□□□□ -0.52
VPS18-202ENST00000558474 H0YIZ8 118 aa11.81□□□□□ -0.52
VPS18-202ENST00000558474 FCN1O00602 326 aa11.81□□□□□ -0.52
VPS18-202ENST00000558474 SSSCA1O60232 199 aa11.81□□□□□ -0.52
VPS18-202ENST00000558474 TSC22D2O75157 780 aa11.81□□□□□ -0.52
VPS18-202ENST00000558474 CNIH1O95406 144 aa11.81□□□□□ -0.52
VPS18-202ENST00000558474 RPL15P61313 204 aaKnown RBP11.81□□□□□ -0.52
VPS18-202ENST00000558474 CD300CQ08708 224 aa11.81□□□□□ -0.52
VPS18-202ENST00000558474 LY6EQ16553 131 aa11.81□□□□□ -0.52
VPS18-202ENST00000558474 Q5BKY6 102 aa11.81□□□□□ -0.52
VPS18-202ENST00000558474 NOXA1Q86UR1 476 aa11.81□□□□□ -0.52
VPS18-202ENST00000558474 TMEM219Q86XT9 240 aa11.81□□□□□ -0.52
VPS18-202ENST00000558474 ZNF418Q8TF45 676 aaPredicted RBP11.81□□□□□ -0.52
VPS18-202ENST00000558474 SRSF12Q8WXF0 261 aaKnown RBP11.81□□□□□ -0.52
VPS18-202ENST00000558474 TMEM68Q96MH6 324 aa11.81□□□□□ -0.52
VPS18-202ENST00000558474 JMJD8Q96S16 334 aa11.81□□□□□ -0.52
VPS18-202ENST00000558474 MAGT1Q9H0U3 335 aa11.81□□□□□ -0.52
VPS18-202ENST00000558474 MBD2Q9UBB5 411 aa11.81□□□□□ -0.52
VPS18-202ENST00000558474 U3KQ87 197 aa11.81□□□□□ -0.52
VPS18-202ENST00000558474 NAV3Q8IVL0 2385 aa11.81□□□□□ -0.52
VPS18-202ENST00000558474 CYSRT1A8MQ03 144 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms