RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 Q6ZPA2 131 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 STPG3Q8N7X2 389 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 IGHV1-18A0A0C4DH31 117 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 C16orf97H3BN30 126 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 C1QTNF9P0C862 333 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 CT45A6P0DMU7 189 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 CT45A5P0DMU8 189 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 CT45A7P0DMV0 189 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 AMTP48728 403 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 CT45A1Q5HYN5 189 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 CT45A3Q8NHU0 189 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 TIMM9Q9Y5J7 89 aa12.9□□□□□ -0.34
AP4E1-202ENST00000558439 SCO2A0A1W2PP80 73 aa12.89□□□□□ -0.35
AP4E1-202ENST00000558439 PKIAP61925 76 aa12.89□□□□□ -0.35
AP4E1-202ENST00000558439 TNXAQ16473 311 aa12.89□□□□□ -0.35
AP4E1-202ENST00000558439 MORN2Q502X0 79 aa12.89□□□□□ -0.35
AP4E1-202ENST00000558439 TMEM167BQ9NRX6 74 aa12.89□□□□□ -0.35
AP4E1-202ENST00000558439 TRAV3A0A0B4J244 114 aa12.89□□□□□ -0.35
AP4E1-202ENST00000558439 ZNF253O75346 499 aa12.89□□□□□ -0.35
AP4E1-202ENST00000558439 SLC25A5P05141 298 aaKnown RBP12.89□□□□□ -0.35
AP4E1-202ENST00000558439 FAM90A2PQ658T7 463 aa12.89□□□□□ -0.35
AP4E1-202ENST00000558439 OR8I2Q8N0Y5 310 aa12.89□□□□□ -0.35
AP4E1-202ENST00000558439 CD177Q8N6Q3 437 aa12.89□□□□□ -0.35
AP4E1-202ENST00000558439 OR1B1Q8NGR6 318 aa12.89□□□□□ -0.35
AP4E1-202ENST00000558439 DMRT1Q9Y5R6 373 aa12.89□□□□□ -0.35
AP4E1-202ENST00000558439 IGFBP2P18065 325 aa12.89□□□□□ -0.35
AP4E1-202ENST00000558439 DUTP33316 252 aaKnown RBP12.89□□□□□ -0.35
AP4E1-202ENST00000558439 HCP5Q6MZN7 132 aa12.89□□□□□ -0.35
AP4E1-202ENST00000558439 TRBV6-6A0A0A6YYG2 114 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 RANP62826 216 aaKnown RBP12.88□□□□□ -0.35
AP4E1-202ENST00000558439 PYY3Q5JQD4 70 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 C1orf185Q5T7R7 199 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 OR4A47Q6IF82 309 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 TMEM14EPQ6UXP3 125 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 PQLC2Q6ZP29 291 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 TGIF2LYQ8IUE0 185 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 TGIF2LXQ8IUE1 241 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 IMMP2LQ96T52 175 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 CBLN1P23435 193 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 ZMAT5Q9UDW3 170 aaKnown RBP12.88□□□□□ -0.35
AP4E1-202ENST00000558439 A0A1B0GW64 132 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 FAM90A27PA6NNH2 459 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 HSBP1O75506 76 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 CGAP01215 116 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 RBP4P02753 201 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 REG1AP05451 166 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 IL6RP08887 468 aaPredicted RBP12.88□□□□□ -0.35
AP4E1-202ENST00000558439 GLRXP35754 106 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 PRB3Q04118 309 aaPredicted RBP12.88□□□□□ -0.35
AP4E1-202ENST00000558439 DERL1Q9BUN8 251 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 Q6ZSR3 168 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 OR1L8Q8NGR8 309 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 PAM16Q9Y3D7 125 aa12.88□□□□□ -0.35
AP4E1-202ENST00000558439 OR4A8P0C604 315 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 MYOD1P15172 320 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 DDTP30046 118 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 GCHFRP30047 84 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 ZNF355PQ9NSJ1 428 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 TRAV1-1A0A0B4J248 108 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 TRAV34A0A0B4J273 112 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 ZNF726P1Q15940 193 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 DOLPP1Q86YN1 238 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 NABP2Q9BQ15 211 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 PPIAL4EA0A075B759 164 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 PPIAL4DF5H284 164 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 PPIAL4FP0DN26 164 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 CD81P60033 236 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 TCF23Q7RTU1 214 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 HAPLN4Q86UW8 402 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 LYPD6BQ8NI32 183 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 SFRP2Q96HF1 295 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 VAMP8Q9BV40 100 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 IDI2-AS1Q9NZ38 188 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 IL19Q9UHD0 177 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 PPIAL4AQ9Y536 164 aa12.87□□□□□ -0.35
AP4E1-202ENST00000558439 GATCO43716 136 aaKnown RBP12.86□□□□□ -0.35
AP4E1-202ENST00000558439 LINC00869P0C866 280 aa12.86□□□□□ -0.35
AP4E1-202ENST00000558439 SRP14P37108 136 aaKnown RBP12.86□□□□□ -0.35
AP4E1-202ENST00000558439 OR5I1Q13606 314 aa12.86□□□□□ -0.35
AP4E1-202ENST00000558439 VN1R17PQ8TDU5 208 aa12.86□□□□□ -0.35
AP4E1-202ENST00000558439 H3BTX0 84 aa12.86□□□□□ -0.35
AP4E1-202ENST00000558439 SSX7Q7RTT5 188 aa12.86□□□□□ -0.35
AP4E1-202ENST00000558439 TMEM183AQ8IXX5 376 aa12.86□□□□□ -0.35
AP4E1-202ENST00000558439 GCSAMQ8N6F7 178 aa12.86□□□□□ -0.35
AP4E1-202ENST00000558439 TBX15Q96SF7 602 aa12.86□□□□□ -0.35
AP4E1-202ENST00000558439 IGKV1D-33P01593 117 aa12.86□□□□□ -0.35
AP4E1-202ENST00000558439 IGKV1-33P01594 117 aa12.86□□□□□ -0.35
AP4E1-202ENST00000558439 RAB4AP20338 218 aa12.86□□□□□ -0.35
AP4E1-202ENST00000558439 MBNL3Q9NUK0 354 aaKnown RBP12.86□□□□□ -0.35
AP4E1-202ENST00000558439 SAA2-SAA4A0A096LPE2 208 aa12.85□□□□□ -0.35
AP4E1-202ENST00000558439 SLC25A17O43808 307 aa12.85□□□□□ -0.35
AP4E1-202ENST00000558439 SAA2P0DJI9 122 aaPredicted RBP12.85□□□□□ -0.35
AP4E1-202ENST00000558439 PLA2G5P39877 138 aa12.85□□□□□ -0.35
AP4E1-202ENST00000558439 ZNF714Q96N38 554 aa12.85□□□□□ -0.35
AP4E1-202ENST00000558439 TNCP24821 2201 aa12.85□□□□□ -0.35
AP4E1-202ENST00000558439 TIMM23BQ5SRD1 257 aa12.85□□□□□ -0.35
AP4E1-202ENST00000558439 RPEQ96AT9 228 aa12.85□□□□□ -0.35
AP4E1-202ENST00000558439 ONECUT1Q9UBC0 465 aa12.85□□□□□ -0.35
AP4E1-202ENST00000558439 FAM157AC9JC47 383 aa12.85□□□□□ -0.35
AP4E1-202ENST00000558439 CCL3L1P16619 93 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms