RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 ZNF729A6NN14 1252 aaPredicted RBP11.89□□□□□ -0.51
SPG11-210ENST00000558319 SAA1P0DJI8 122 aaPredicted RBP11.89□□□□□ -0.51
SPG11-210ENST00000558319 ZNF708P17019 499 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 ATP5G3P48201 142 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 FDCSPQ8NFU4 85 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 SFTPCP11686 197 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 WDR82Q6UXN9 313 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 NPIPB3Q92617 1050 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 YAE1D1Q9NRH1 226 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 SCN8AQ9UQD0 1980 aa11.89□□□□□ -0.51
SPG11-210ENST00000558319 FSTP19883 344 aa11.88□□□□□ -0.51
SPG11-210ENST00000558319 SELENOTP62341 195 aa11.88□□□□□ -0.51
SPG11-210ENST00000558319 ICAM4Q14773 271 aa11.88□□□□□ -0.51
SPG11-210ENST00000558319 CCDC144NLQ6NUI1 221 aa11.88□□□□□ -0.51
SPG11-210ENST00000558319 TRBV7-9A0A0J9YWB2 115 aa11.88□□□□□ -0.51
SPG11-210ENST00000558319 SNRNP200O75643 2136 aaKnown RBP11.88□□□□□ -0.51
SPG11-210ENST00000558319 SERF1AO75920 110 aa11.88□□□□□ -0.51
SPG11-210ENST00000558319 LY6DQ14210 128 aa11.88□□□□□ -0.51
SPG11-210ENST00000558319 C3orf36Q3SXR2 165 aa11.88□□□□□ -0.51
SPG11-210ENST00000558319 PIN1P1O15428 100 aa11.88□□□□□ -0.51
SPG11-210ENST00000558319 PDLIM4P50479 330 aa11.88□□□□□ -0.51
SPG11-210ENST00000558319 NAA38Q9BRA0 125 aaKnown RBP11.88□□□□□ -0.51
SPG11-210ENST00000558319 RPRMQ9NS64 109 aa11.88□□□□□ -0.51
SPG11-210ENST00000558319 ALS2Q96Q42 1657 aa11.88□□□□□ -0.51
SPG11-210ENST00000558319 TRAV24A0A0B4J272 114 aa11.88□□□□□ -0.51
SPG11-210ENST00000558319 PGPEP1LA6NFU8 196 aa11.88□□□□□ -0.51
SPG11-210ENST00000558319 GLI3P10071 1580 aa11.88□□□□□ -0.51
SPG11-210ENST00000558319 MPV17P39210 176 aa11.88□□□□□ -0.51
SPG11-210ENST00000558319 RAX2Q96IS3 184 aa11.88□□□□□ -0.51
SPG11-210ENST00000558319 A0A1W2PQM1 296 aa11.87□□□□□ -0.51
SPG11-210ENST00000558319 LTBRP36941 435 aa11.87□□□□□ -0.51
SPG11-210ENST00000558319 SSBP4Q9BWG4 385 aaPredicted RBP11.87□□□□□ -0.51
SPG11-210ENST00000558319 DLL3Q9NYJ7 618 aa11.87□□□□□ -0.51
SPG11-210ENST00000558319 CASP8AP2Q9UKL3 1982 aa11.87□□□□□ -0.51
SPG11-210ENST00000558319 IDI2-AS1Q9NZ38 188 aa11.87□□□□□ -0.51
SPG11-210ENST00000558319 MFAP4P55083 255 aa11.87□□□□□ -0.51
SPG11-210ENST00000558319 ASXL3Q9C0F0 2248 aa11.87□□□□□ -0.51
SPG11-210ENST00000558319 TRAV8-4A0A0B4J246 113 aa11.87□□□□□ -0.51
SPG11-210ENST00000558319 ZCCHC24Q8N2G6 241 aaKnown RBP11.87□□□□□ -0.51
SPG11-210ENST00000558319 KCNK17Q96T54 332 aa11.87□□□□□ -0.51
SPG11-210ENST00000558319 NPDC1Q9NQX5 325 aaPredicted RBP11.87□□□□□ -0.51
SPG11-210ENST00000558319 KLF14Q8TD94 323 aaPredicted RBP11.87□□□□□ -0.51
SPG11-210ENST00000558319 RCC1LQ96I51 464 aaKnown RBP11.87□□□□□ -0.51
SPG11-210ENST00000558319 PEX7O00628 323 aa11.86□□□□□ -0.51
SPG11-210ENST00000558319 TBR1Q16650 682 aa11.86□□□□□ -0.51
SPG11-210ENST00000558319 NRN1Q9NPD7 142 aa11.86□□□□□ -0.51
SPG11-210ENST00000558319 IL6RP08887 468 aaPredicted RBP11.86□□□□□ -0.51
SPG11-210ENST00000558319 RNASE4P34096 147 aaKnown RBP11.86□□□□□ -0.51
SPG11-210ENST00000558319 SIGLEC12Q96PQ1 595 aa11.86□□□□□ -0.51
SPG11-210ENST00000558319 ANKRD31Q8N7Z5 1873 aa11.86□□□□□ -0.51
SPG11-210ENST00000558319 IGHV1-69-2A0A0G2JMI3 117 aa11.86□□□□□ -0.51
SPG11-210ENST00000558319 TRGV3P03979 118 aa11.86□□□□□ -0.51
SPG11-210ENST00000558319 LEPP41159 167 aa11.86□□□□□ -0.51
SPG11-210ENST00000558319 LIMS1P48059 325 aa11.86□□□□□ -0.51
SPG11-210ENST00000558319 CARHSP1Q9Y2V2 147 aaKnown RBP11.86□□□□□ -0.51
SPG11-210ENST00000558319 ABCA3Q99758 1704 aa11.86□□□□□ -0.51
SPG11-210ENST00000558319 A0A1W2PS18 150 aa11.86□□□□□ -0.51
SPG11-210ENST00000558319 MGST3O14880 152 aa11.86□□□□□ -0.51
SPG11-210ENST00000558319 SRP19P09132 144 aaKnown RBP11.86□□□□□ -0.51
SPG11-210ENST00000558319 HSPE1P61604 102 aaKnown RBP11.86□□□□□ -0.51
SPG11-210ENST00000558319 PAX2Q02962 417 aa11.86□□□□□ -0.51
SPG11-210ENST00000558319 C4orf51C9J302 202 aa11.86□□□□□ -0.51
SPG11-210ENST00000558319 NGFRP08138 427 aa11.86□□□□□ -0.51
SPG11-210ENST00000558319 C5orf30Q96GV9 206 aa11.86□□□□□ -0.51
SPG11-210ENST00000558319 FAM159AQ6UWV7 190 aa11.86□□□□□ -0.51
SPG11-210ENST00000558319 ZNF815PA8K554 130 aa11.85□□□□□ -0.51
SPG11-210ENST00000558319 ZP4Q12836 540 aa11.85□□□□□ -0.51
SPG11-210ENST00000558319 SMIM8Q96KF7 97 aa11.85□□□□□ -0.51
SPG11-210ENST00000558319 RNF115Q9Y4L5 304 aa11.85□□□□□ -0.51
SPG11-210ENST00000558319 LYNX1G3V0Z9 82 aa11.85□□□□□ -0.51
SPG11-210ENST00000558319 LYNX1P0DP58 116 aa11.85□□□□□ -0.51
SPG11-210ENST00000558319 C1orf122Q6ZSJ8 110 aa11.85□□□□□ -0.51
SPG11-210ENST00000558319 TCF19Q9Y242 345 aa11.85□□□□□ -0.51
SPG11-210ENST00000558319 SYNGR3O43761 229 aa11.85□□□□□ -0.51
SPG11-210ENST00000558319 NPCDR1Q9BY65 106 aa11.85□□□□□ -0.51
SPG11-210ENST00000558319 RNASE7Q9H1E1 156 aaKnown RBP11.85□□□□□ -0.51
SPG11-210ENST00000558319 RFPL3SP0C7P2 107 aa11.85□□□□□ -0.51
SPG11-210ENST00000558319 TMEM106BQ9NUM4 274 aa11.85□□□□□ -0.51
SPG11-210ENST00000558319 CD69Q07108 199 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 TMEM155Q4W5P6 130 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 NDUFAF3Q9BU61 184 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 LINC00527Q9UJ94 153 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 A0A0G2JMM0 328 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 A0A1W2PPB8 328 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 A0A1W2PRS3 328 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 KIR3DP1A8MWS1 328 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 C1orf174Q8IYL3 243 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 KIAA1551Q9HCM1 1747 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 CD1AP06126 327 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 ZNF257Q9Y2Q1 563 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 A8MXK9 166 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 IGFBP2P18065 325 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 FAM106AQ4KMX7 169 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 CLEC19AQ6UXS0 136 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 FOCADQ5VW36 1801 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 PLXNB2O15031 1838 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 TRBV5-7A0A0A0MS05 114 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 PRR33A8MZF0 331 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 IGKV1D-33P01593 117 aa11.84□□□□□ -0.51
SPG11-210ENST00000558319 IGKV1-33P01594 117 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms