RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 OR52B4Q8NGK2 314 aa16.75■□□□□ 0.27
CASC4-204ENST00000557945 OR4A16Q8NH70 328 aa16.75■□□□□ 0.27
CASC4-204ENST00000557945 CHPT1Q8WUD6 406 aa16.75■□□□□ 0.27
CASC4-204ENST00000557945 SRSF12Q8WXF0 261 aaKnown RBP16.75■□□□□ 0.27
CASC4-204ENST00000557945 PHB2Q99623 299 aa16.75■□□□□ 0.27
CASC4-204ENST00000557945 WNT10AQ9GZT5 417 aa16.75■□□□□ 0.27
CASC4-204ENST00000557945 PIGBOS1A0A0B4J2F0 54 aa16.74■□□□□ 0.27
CASC4-204ENST00000557945 MSGN1A6NI15 193 aa16.74■□□□□ 0.27
CASC4-204ENST00000557945 G3V318 75 aa16.74■□□□□ 0.27
CASC4-204ENST00000557945 PTTG1O95997 202 aa16.74■□□□□ 0.27
CASC4-204ENST00000557945 EGR2P11161 476 aaPredicted RBP16.74■□□□□ 0.27
CASC4-204ENST00000557945 RPL27AP46776 148 aaKnown RBP16.74■□□□□ 0.27
CASC4-204ENST00000557945 LYZL2Q7Z4W2 148 aa16.74■□□□□ 0.27
CASC4-204ENST00000557945 SGMS2Q8NHU3 365 aa16.74■□□□□ 0.27
CASC4-204ENST00000557945 COQ8AQ8NI60 647 aa16.74■□□□□ 0.27
CASC4-204ENST00000557945 FYTTD1Q96QD9 318 aaKnown RBP16.74■□□□□ 0.27
CASC4-204ENST00000557945 SEC22CQ9BRL7 303 aa16.74■□□□□ 0.27
CASC4-204ENST00000557945 COMMD5Q9GZQ3 224 aa16.74■□□□□ 0.27
CASC4-204ENST00000557945 PRNDQ9UKY0 176 aa16.74■□□□□ 0.27
CASC4-204ENST00000557945 TRAV41A0A0B4J266 112 aa16.73■□□□□ 0.27
CASC4-204ENST00000557945 A0A0B4J2A0 478 aa16.73■□□□□ 0.27
CASC4-204ENST00000557945 A0A0G2JRQ6 117 aa16.73■□□□□ 0.27
CASC4-204ENST00000557945 PSMB11A5LHX3 300 aa16.73■□□□□ 0.27
CASC4-204ENST00000557945 INMT-MINDY4F8WBC2 141 aa16.73■□□□□ 0.27
CASC4-204ENST00000557945 DUS4LO95620 317 aaKnown RBP16.73■□□□□ 0.27
CASC4-204ENST00000557945 MECP2P51608 486 aaKnown RBP16.73■□□□□ 0.27
CASC4-204ENST00000557945 TMEM267Q0VDI3 215 aaPredicted RBP16.73■□□□□ 0.27
CASC4-204ENST00000557945 UNQ5815/PRO19632Q6UWF5 114 aa16.73■□□□□ 0.27
CASC4-204ENST00000557945 ZNF329Q86UD4 541 aa16.73■□□□□ 0.27
CASC4-204ENST00000557945 FAM219AQ8IW50 185 aa16.73■□□□□ 0.27
CASC4-204ENST00000557945 LFNGQ8NES3 379 aa16.73■□□□□ 0.27
CASC4-204ENST00000557945 GON7Q9BXV9 100 aa16.73■□□□□ 0.27
CASC4-204ENST00000557945 SHPKQ9UHJ6 478 aa16.73■□□□□ 0.27
CASC4-204ENST00000557945 OR51B2Q9Y5P1 312 aa16.73■□□□□ 0.27
CASC4-204ENST00000557945 P0C879 139 aa16.72■□□□□ 0.27
CASC4-204ENST00000557945 APELAP0DMC3 54 aa16.72■□□□□ 0.27
CASC4-204ENST00000557945 SLC35B1P78383 322 aa16.72■□□□□ 0.27
CASC4-204ENST00000557945 KRTAP21-3Q3LHN1 58 aa16.72■□□□□ 0.27
CASC4-204ENST00000557945 LRTM2Q8N967 370 aa16.72■□□□□ 0.27
CASC4-204ENST00000557945 LSM10Q969L4 123 aaKnown RBP16.72■□□□□ 0.27
CASC4-204ENST00000557945 GPR146Q96CH1 333 aa16.72■□□□□ 0.27
CASC4-204ENST00000557945 SPIN2AQ99865 258 aa16.72■□□□□ 0.27
CASC4-204ENST00000557945 SPIN2BQ9BPZ2 258 aa16.72■□□□□ 0.27
CASC4-204ENST00000557945 FKBP11Q9NYL4 201 aa16.72■□□□□ 0.27
CASC4-204ENST00000557945 COL6A5A8TX70 2615 aa16.72■□□□□ 0.27
CASC4-204ENST00000557945 C15orf61A6NNL5 157 aa16.71■□□□□ 0.27
CASC4-204ENST00000557945 FGF2P09038 288 aa16.71■□□□□ 0.27
CASC4-204ENST00000557945 CRIP2P52943 208 aaPredicted RBP16.71■□□□□ 0.27
CASC4-204ENST00000557945 RGS21Q2M5E4 152 aa16.71■□□□□ 0.27
CASC4-204ENST00000557945 C10orf99Q6UWK7 81 aa16.71■□□□□ 0.27
CASC4-204ENST00000557945 C3orf56Q8N813 242 aa16.71■□□□□ 0.27
CASC4-204ENST00000557945 OR5AU1Q8NGC0 362 aa16.71■□□□□ 0.27
CASC4-204ENST00000557945 ZNF431Q8TF32 576 aaPredicted RBP16.71■□□□□ 0.27
CASC4-204ENST00000557945 WFDC12Q8WWY7 111 aa16.71■□□□□ 0.27
CASC4-204ENST00000557945 MARVELD1Q9BSK0 173 aa16.71■□□□□ 0.27
CASC4-204ENST00000557945 HINT2Q9BX68 163 aa16.71■□□□□ 0.27
CASC4-204ENST00000557945 ZNF580Q9UK33 172 aa16.71■□□□□ 0.27
CASC4-204ENST00000557945 A0A0B4J293 547 aa16.7■□□□□ 0.26
CASC4-204ENST00000557945 TEX50A0A1B0GTY4 177 aa16.7■□□□□ 0.26
CASC4-204ENST00000557945 DUXBA0A1W2PPF3 345 aa16.7■□□□□ 0.26
CASC4-204ENST00000557945 DBX1A6NMT0 343 aa16.7■□□□□ 0.26
CASC4-204ENST00000557945 IL5P05113 134 aa16.7■□□□□ 0.26
CASC4-204ENST00000557945 HOXB5P09067 269 aa16.7■□□□□ 0.26
CASC4-204ENST00000557945 AKIRIN2Q53H80 203 aa16.7■□□□□ 0.26
CASC4-204ENST00000557945 OR1L8Q8NGR8 309 aa16.7■□□□□ 0.26
CASC4-204ENST00000557945 MITD1Q8WV92 249 aa16.7■□□□□ 0.26
CASC4-204ENST00000557945 QTRT1Q9BXR0 403 aaKnown RBP16.7■□□□□ 0.26
CASC4-204ENST00000557945 TMEM14BQ9NUH8 114 aa16.7■□□□□ 0.26
CASC4-204ENST00000557945 CACNG5Q9UF02 275 aa16.7■□□□□ 0.26
CASC4-204ENST00000557945 FOXA2Q9Y261 457 aaPredicted RBP16.7■□□□□ 0.26
CASC4-204ENST00000557945 A0A1W2PN81 502 aa16.69■□□□□ 0.26
CASC4-204ENST00000557945 HMX3A6NHT5 357 aa16.69■□□□□ 0.26
CASC4-204ENST00000557945 E7EUB6 86 aa16.69■□□□□ 0.26
CASC4-204ENST00000557945 DHFRP00374 187 aa16.69■□□□□ 0.26
CASC4-204ENST00000557945 CHRNA7P36544 502 aa16.69■□□□□ 0.26
CASC4-204ENST00000557945 Q6ZRM9 215 aa16.69■□□□□ 0.26
CASC4-204ENST00000557945 C11orf44Q8N8P7 122 aa16.69■□□□□ 0.26
CASC4-204ENST00000557945 UXS1Q8NBZ7 420 aa16.69■□□□□ 0.26
CASC4-204ENST00000557945 GPN1Q9HCN4 374 aaPredicted RBP16.69■□□□□ 0.26
CASC4-204ENST00000557945 TRAPPC2P0DI81 140 aa16.68■□□□□ 0.26
CASC4-204ENST00000557945 TRAPPC2BP0DI82 140 aa16.68■□□□□ 0.26
CASC4-204ENST00000557945 NMSQ5H8A3 153 aa16.68■□□□□ 0.26
CASC4-204ENST00000557945 OR5T1Q8NG75 326 aa16.68■□□□□ 0.26
CASC4-204ENST00000557945 OR4X2Q8NGF9 303 aa16.68■□□□□ 0.26
CASC4-204ENST00000557945 OR5B3Q8NH48 314 aa16.68■□□□□ 0.26
CASC4-204ENST00000557945 PDCD10Q9BUL8 212 aa16.68■□□□□ 0.26
CASC4-204ENST00000557945 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.68■□□□□ 0.26
CASC4-204ENST00000557945 TMED3Q9Y3Q3 217 aa16.68■□□□□ 0.26
CASC4-204ENST00000557945 A0A1B0GW64 132 aa16.67■□□□□ 0.26
CASC4-204ENST00000557945 CGB1A6NKQ9 187 aa16.67■□□□□ 0.26
CASC4-204ENST00000557945 TEX22C9J3V5 150 aa16.67■□□□□ 0.26
CASC4-204ENST00000557945 ST8SIA3O43173 380 aa16.67■□□□□ 0.26
CASC4-204ENST00000557945 PRAF2O60831 178 aa16.67■□□□□ 0.26
CASC4-204ENST00000557945 ADAP1O75689 374 aa16.67■□□□□ 0.26
CASC4-204ENST00000557945 IFNA17P01571 189 aa16.67■□□□□ 0.26
CASC4-204ENST00000557945 SULT1A3P0DMM9 295 aa16.67■□□□□ 0.26
CASC4-204ENST00000557945 SULT1A4P0DMN0 295 aa16.67■□□□□ 0.26
CASC4-204ENST00000557945 KRTAP10-3P60369 221 aa16.67■□□□□ 0.26
CASC4-204ENST00000557945 CFHR3Q02985 330 aa16.67■□□□□ 0.26
CASC4-204ENST00000557945 SRSF4Q08170 494 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms