RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 OR1S2Q8NGQ3 325 aa3.03□□□□□ -1.92
PRPF39-212ENST00000557477 OR6N1Q8NGY5 312 aa3.03□□□□□ -1.92
PRPF39-212ENST00000557477 OR2G3Q8NGZ4 309 aa3.03□□□□□ -1.92
PRPF39-212ENST00000557477 MARCH1Q8TCQ1 289 aa3.03□□□□□ -1.92
PRPF39-212ENST00000557477 CASTOR1Q8WTX7 329 aa3.03□□□□□ -1.92
PRPF39-212ENST00000557477 SKA2Q8WVK7 121 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-212ENST00000557477 RERGQ96A58 199 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-212ENST00000557477 GALNT14Q96FL9 552 aa3.03□□□□□ -1.92
PRPF39-212ENST00000557477 JSRP1Q96MG2 331 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-212ENST00000557477 C20orf144Q9BQM9 153 aa3.03□□□□□ -1.92
PRPF39-212ENST00000557477 MS4A8Q9BY19 250 aa3.03□□□□□ -1.92
PRPF39-212ENST00000557477 ULBP2Q9BZM5 246 aa3.03□□□□□ -1.92
PRPF39-212ENST00000557477 OR8D2Q9GZM6 311 aa3.03□□□□□ -1.92
PRPF39-212ENST00000557477 TLNRD1Q9H1K6 362 aa3.03□□□□□ -1.92
PRPF39-212ENST00000557477 PLEKHA1Q9HB21 404 aa3.03□□□□□ -1.92
PRPF39-212ENST00000557477 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.03□□□□□ -1.92
PRPF39-212ENST00000557477 DOK5Q9P104 306 aa3.03□□□□□ -1.92
PRPF39-212ENST00000557477 JPT1Q9UK76 154 aa3.03□□□□□ -1.92
PRPF39-212ENST00000557477 HHLA2Q9UM44 414 aa3.03□□□□□ -1.92
PRPF39-212ENST00000557477 SLC17A4Q9Y2C5 497 aa3.03□□□□□ -1.92
PRPF39-212ENST00000557477 F11RQ9Y624 299 aaKnown RBP3.03□□□□□ -1.92
PRPF39-212ENST00000557477 DOCK9Q9BZ29 2069 aa3.03□□□□□ -1.92
PRPF39-212ENST00000557477 C2CD3Q4AC94 2353 aa3.03□□□□□ -1.92
PRPF39-212ENST00000557477 SCN8AQ9UQD0 1980 aa3.03□□□□□ -1.92
PRPF39-212ENST00000557477 DOPEY1Q5JWR5 2465 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 ICE1Q9Y2F5 2266 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 LRP4O75096 1905 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 ANKRD20A5PA0PJZ0 165 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 TLCD2A6NGC4 264 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 FAM166BA8MTA8 275 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 MCRIP1C9JLW8 97 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 E7EQ34 232 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 PPP5D1E7EU14 171 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 RFXANKO14593 260 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 PLA2G10O15496 165 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 RBFOX2O43251 390 aaKnown RBP eCLIP3.02□□□□□ -1.93
PRPF39-212ENST00000557477 XRCC2O43543 280 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 ALOX12BO75342 701 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 RCBTB2O95199 551 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 CDS2O95674 445 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 CLIC3O95833 236 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 SERPINE1P05121 402 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 SERPINA7P05543 415 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 IGHV3-43DP0DP04 118 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 GZMBP10144 247 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 PSG2P11465 335 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 FABP4P15090 132 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 ADCYAP1P18509 176 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 NFYAP23511 347 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-212ENST00000557477 NSG1P42857 185 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 INPP1P49441 399 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 CLDN12P56749 244 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 PIGPP57054 158 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 PPP1CAP62136 330 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 RHOGP84095 191 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 ZNF92Q03936 586 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 EBPQ15125 230 aaKnown RBP3.02□□□□□ -1.93
PRPF39-212ENST00000557477 LTC4SQ16873 150 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 MORN2Q502X0 79 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-212ENST00000557477 TPTE2P1Q5T6R2 138 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 HENMT1Q5T8I9 393 aaKnown RBP3.02□□□□□ -1.93
PRPF39-212ENST00000557477 ZNF705AQ6ZN79 300 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-212ENST00000557477 LINC00173Q6ZV60 143 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 HIST2H3AQ71DI3 136 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 OLIG3Q7RTU3 272 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 OR2W3Q7Z3T1 314 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 ZNF429Q86V71 674 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 RIMKLAQ8IXN7 391 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 CMTM1Q8IZ96 169 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 SMIM20Q8N5G0 67 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 SPICQ8N5J4 248 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 TMEM251Q8N6I4 163 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 PRELID2Q8N945 189 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 SLC30A7Q8NEW0 376 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 SLC26A10Q8NG04 563 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 OR11H7Q8NGC8 314 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 OR51G1Q8NGK1 321 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 OR2T35Q8NGX2 323 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 OR52E5Q8NH55 327 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 JOSD2Q8TAC2 188 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 SLC7A13Q8TCU3 470 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 TMEM239Q8WW34 195 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 NRGNQ92686 78 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 TMEM54Q969K7 222 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 ARL11Q969Q4 196 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 IP6K3Q96PC2 410 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 TBX5Q99593 518 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 SIGMAR1Q99720 223 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 HDHD3Q9BSH5 251 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-212ENST00000557477 C20orf24Q9BUV8 137 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 PBDC1Q9BVG4 233 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 SYT4Q9H2B2 425 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 NOX3Q9HBY0 568 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 SPANXA1Q9NS26 97 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 LYRM2Q9NU23 88 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-212ENST00000557477 TMEM38BQ9NVV0 291 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 NECAP2Q9NVZ3 263 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 HRASLS2Q9NWW9 162 aa3.02□□□□□ -1.93
PRPF39-212ENST00000557477 NXT1Q9UKK6 140 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms