RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 KCNIP3Q9Y2W7 256 aa4.84□□□□□ -1.63
FOXN3-215ENST00000557261 LINC00312Q9Y6C7 94 aa4.84□□□□□ -1.63
FOXN3-215ENST00000557261 SAA2-SAA4A0A096LPE2 208 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 TRGV10A0A0A0MS01 117 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 hADV38S2A0JD32 116 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 RNF212BA8MTL3 300 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 HMSDA8MTL9 139 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 YPEL1O60688 119 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 CYB5R3P00387 301 aaPredicted RBP4.83□□□□□ -1.64
FOXN3-215ENST00000557261 HBZP02008 142 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 PGAM2P15259 253 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 CXCL3P19876 107 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 GNRHRP30968 328 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 CD80P33681 288 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 CEBPDP49716 269 aaPredicted RBP4.83□□□□□ -1.64
FOXN3-215ENST00000557261 RAB7AP51149 207 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 XGP55808 180 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 PIGPP57054 158 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 AESQ08117 197 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 FAM106AQ4KMX7 169 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 ABCA11PQ4W5N1 156 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 PDLIM3Q53GG5 364 aaPredicted RBP4.83□□□□□ -1.64
FOXN3-215ENST00000557261 LRRC10Q5BKY1 277 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 FAM71F2Q6NXP2 309 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 UQCC3Q6UW78 93 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 ZNF562Q6V9R5 426 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 ZNF645Q8N7E2 425 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.83□□□□□ -1.64
FOXN3-215ENST00000557261 OR10V1Q8NGI7 309 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 C8orf46Q8TAG6 207 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 RTN4IP1Q8WWV3 396 aaPredicted RBP4.83□□□□□ -1.64
FOXN3-215ENST00000557261 NEUROG1Q92886 237 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 TIMD4Q96H15 378 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 CYYR1Q96J86 154 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 TMEM56Q96MV1 263 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 YPEL2Q96QA6 119 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 OVOL2Q9BRP0 275 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 DCTN5Q9BTE1 182 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 GAL3ST2Q9H3Q3 398 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 ZFP57Q9NU63 452 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 PIPOXQ9P0Z9 390 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 TMEM56-RWDD3S4R434 201 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 HRNRQ86YZ3 2850 aaPredicted RBP4.83□□□□□ -1.64
FOXN3-215ENST00000557261 ABCA4P78363 2273 aa4.83□□□□□ -1.64
FOXN3-215ENST00000557261 KIAA2026Q5HYC2 2103 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 ROS1P08922 2347 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 TRAV26-1A0A087WT03 109 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 IGHV3-64DA0A0J9YX35 117 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 KBTBD11-OT1A0A1B0GTJ5 212 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 BTBD17A6NE02 478 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 PRAC2D3DTV9 90 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 G3V3Q6 166 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 C19orf84I3L1E1 186 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 BET1O15155 118 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 NDUFB3O43676 98 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 PET100P0DJ07 73 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 IGHV4-38-2P0DP08 117 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 SLC25A6P12236 298 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 PAX1P15863 534 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 AKR1C4P17516 323 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 RPL35AP18077 110 aaKnown RBP4.82□□□□□ -1.64
FOXN3-215ENST00000557261 C4BPBP20851 252 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 NFYAP23511 347 aaPredicted RBP4.82□□□□□ -1.64
FOXN3-215ENST00000557261 UCP1P25874 307 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 IL2RGP31785 369 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 RBMXP38159 391 aaKnown RBP4.82□□□□□ -1.64
FOXN3-215ENST00000557261 EIF2B2P49770 351 aaKnown RBP4.82□□□□□ -1.64
FOXN3-215ENST00000557261 ARHGDIBP52566 201 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 DVL1P1P54792 670 aaPredicted RBP4.82□□□□□ -1.64
FOXN3-215ENST00000557261 H2BFSP57053 126 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 TMEM33P57088 247 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 EWSR1Q01844 656 aaKnown RBP eCLIP4.82□□□□□ -1.64
FOXN3-215ENST00000557261 CD300CQ08708 224 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 BAMBIQ13145 260 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 SRSF9Q13242 221 aaKnown RBP eCLIP4.82□□□□□ -1.64
FOXN3-215ENST00000557261 EIF4EBP1Q13541 118 aaPredicted RBP4.82□□□□□ -1.64
FOXN3-215ENST00000557261 ZNF345Q14585 488 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 TMEM187Q14656 261 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 HEPN1Q6WQI6 88 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 LGI3Q8N145 548 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 LRRC75A-AS1Q8N1F1 130 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 OR5T2Q8NGG2 359 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 OR13A1Q8NGR1 328 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 ZNF596Q8TC21 504 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 NTN5Q8WTR8 489 aaPredicted RBP4.82□□□□□ -1.64
FOXN3-215ENST00000557261 CCL17Q92583 94 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 TNFRSF14Q92956 283 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 TOMM40LQ969M1 308 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 PINX1Q96BK5 328 aaKnown RBP4.82□□□□□ -1.64
FOXN3-215ENST00000557261 ABHD14BQ96IU4 210 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 CITED1Q99966 193 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 TMEM222Q9H0R3 208 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 NRN1Q9NPD7 142 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 CALYQ9NYX4 217 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 CLN8Q9UBY8 286 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 TCF19Q9Y242 345 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 DOCK11Q5JSL3 2073 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 PDZD2O15018 2839 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 APCP25054 2843 aa4.82□□□□□ -1.64
FOXN3-215ENST00000557261 IGHV3OR15-7A0A075B7D8 119 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms