RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 SP6Q3SY56 376 aa17.55■□□□□ 0.4
PABPN1-206ENST00000556809 C10orf55Q5SWW7 151 aa17.55■□□□□ 0.4
PABPN1-206ENST00000556809 LCNL1Q6ZST4 164 aa17.55■□□□□ 0.4
PABPN1-206ENST00000556809 ADAD2Q8NCV1 583 aaKnown RBP17.55■□□□□ 0.4
PABPN1-206ENST00000556809 TMEM230Q96A57 120 aa17.55■□□□□ 0.4
PABPN1-206ENST00000556809 FOXA2Q9Y261 457 aaPredicted RBP17.55■□□□□ 0.4
PABPN1-206ENST00000556809 NOTCH3Q9UM47 2321 aa17.54■□□□□ 0.4
PABPN1-206ENST00000556809 TRAV3A0A0B4J244 114 aa17.54■□□□□ 0.4
PABPN1-206ENST00000556809 MSGN1A6NI15 193 aa17.54■□□□□ 0.4
PABPN1-206ENST00000556809 IGLV1-40P01703 118 aa17.54■□□□□ 0.4
PABPN1-206ENST00000556809 OR5AC1P0C628 307 aa17.54■□□□□ 0.4
PABPN1-206ENST00000556809 HLA-GP17693 338 aa17.54■□□□□ 0.4
PABPN1-206ENST00000556809 UCP1P25874 307 aa17.54■□□□□ 0.4
PABPN1-206ENST00000556809 SLC6A1P30531 599 aa17.54■□□□□ 0.4
PABPN1-206ENST00000556809 CCR6P51684 374 aa17.54■□□□□ 0.4
PABPN1-206ENST00000556809 RBMS2Q15434 407 aaKnown RBP17.54■□□□□ 0.4
PABPN1-206ENST00000556809 CXorf66Q5JRM2 361 aaPredicted RBP17.54■□□□□ 0.4
PABPN1-206ENST00000556809 CADM3Q8N126 398 aa17.54■□□□□ 0.4
PABPN1-206ENST00000556809 SEC22AQ96IW7 307 aa17.54■□□□□ 0.4
PABPN1-206ENST00000556809 PHB2Q99623 299 aa17.54■□□□□ 0.4
PABPN1-206ENST00000556809 SOX15O60248 233 aa17.53■□□□□ 0.4
PABPN1-206ENST00000556809 TRIM16LQ309B1 348 aa17.53■□□□□ 0.4
PABPN1-206ENST00000556809 OXLD1Q5BKU9 147 aa17.53■□□□□ 0.4
PABPN1-206ENST00000556809 C8orf86Q6ZUL3 223 aa17.53■□□□□ 0.4
PABPN1-206ENST00000556809 TMED4Q7Z7H5 227 aa17.53■□□□□ 0.4
PABPN1-206ENST00000556809 ZNF695Q8IW36 515 aa17.53■□□□□ 0.4
PABPN1-206ENST00000556809 SGPP2Q8IWX5 399 aa17.53■□□□□ 0.4
PABPN1-206ENST00000556809 MYOZ3Q8TDC0 251 aa17.53■□□□□ 0.4
PABPN1-206ENST00000556809 TMEM68Q96MH6 324 aa17.53■□□□□ 0.4
PABPN1-206ENST00000556809 SPIN2AQ99865 258 aa17.53■□□□□ 0.4
PABPN1-206ENST00000556809 SPIN2BQ9BPZ2 258 aa17.53■□□□□ 0.4
PABPN1-206ENST00000556809 PLA2G10O15496 165 aa17.52■□□□□ 0.4
PABPN1-206ENST00000556809 PF4P02776 101 aa17.52■□□□□ 0.4
PABPN1-206ENST00000556809 FGF2P09038 288 aa17.52■□□□□ 0.4
PABPN1-206ENST00000556809 AKR1C4P17516 323 aa17.52■□□□□ 0.4
PABPN1-206ENST00000556809 BTCP35070 178 aa17.52■□□□□ 0.4
PABPN1-206ENST00000556809 RPL27AP46776 148 aaKnown RBP17.52■□□□□ 0.4
PABPN1-206ENST00000556809 CDX1P47902 265 aaPredicted RBP17.52■□□□□ 0.4
PABPN1-206ENST00000556809 ASPHD1Q5U4P2 390 aa17.52■□□□□ 0.4
PABPN1-206ENST00000556809 LINC00482Q8N8I6 264 aa17.52■□□□□ 0.4
PABPN1-206ENST00000556809 KLHL30-AS1Q8NEE0 82 aa17.52■□□□□ 0.4
PABPN1-206ENST00000556809 OR5M8Q8NGP6 311 aa17.52■□□□□ 0.4
PABPN1-206ENST00000556809 TMEM222Q9H0R3 208 aa17.52■□□□□ 0.4
PABPN1-206ENST00000556809 LYRM1O43325 122 aa17.51■□□□□ 0.39
PABPN1-206ENST00000556809 ATG12O94817 140 aa17.51■□□□□ 0.39
PABPN1-206ENST00000556809 NDUFB6O95139 128 aa17.51■□□□□ 0.39
PABPN1-206ENST00000556809 APELAP0DMC3 54 aa17.51■□□□□ 0.39
PABPN1-206ENST00000556809 MYOD1P15172 320 aa17.51■□□□□ 0.39
PABPN1-206ENST00000556809 CD33P20138 364 aa17.51■□□□□ 0.39
PABPN1-206ENST00000556809 DHODHQ02127 395 aa17.51■□□□□ 0.39
PABPN1-206ENST00000556809 KIAA0141Q14154 515 aaPredicted RBP17.51■□□□□ 0.39
PABPN1-206ENST00000556809 TMEM65Q6PI78 240 aa17.51■□□□□ 0.39
PABPN1-206ENST00000556809 H2BFWTQ7Z2G1 175 aa17.51■□□□□ 0.39
PABPN1-206ENST00000556809 MRPL41Q8IXM3 137 aaKnown RBP17.51■□□□□ 0.39
PABPN1-206ENST00000556809 GLYATL2Q8WU03 294 aa17.51■□□□□ 0.39
PABPN1-206ENST00000556809 GALNT14Q96FL9 552 aa17.51■□□□□ 0.39
PABPN1-206ENST00000556809 P2RX4Q99571 388 aa17.51■□□□□ 0.39
PABPN1-206ENST00000556809 TSC22D3Q99576 134 aa17.51■□□□□ 0.39
PABPN1-206ENST00000556809 KCNIP3Q9Y2W7 256 aa17.51■□□□□ 0.39
PABPN1-206ENST00000556809 DNAH3Q8TD57 4116 aa17.5■□□□□ 0.39
PABPN1-206ENST00000556809 SNAPC5O75971 98 aa17.5■□□□□ 0.39
PABPN1-206ENST00000556809 CDS2O95674 445 aa17.5■□□□□ 0.39
PABPN1-206ENST00000556809 OR9G9P0C7N8 305 aa17.5■□□□□ 0.39
PABPN1-206ENST00000556809 PDLIM3Q53GG5 364 aaPredicted RBP17.5■□□□□ 0.39
PABPN1-206ENST00000556809 OR5T1Q8NG75 326 aa17.5■□□□□ 0.39
PABPN1-206ENST00000556809 FYTTD1Q96QD9 318 aaKnown RBP17.5■□□□□ 0.39
PABPN1-206ENST00000556809 COMMD5Q9GZQ3 224 aa17.5■□□□□ 0.39
PABPN1-206ENST00000556809 KLK15Q9H2R5 256 aa17.5■□□□□ 0.39
PABPN1-206ENST00000556809 NUDT19A8MXV4 375 aa17.49■□□□□ 0.39
PABPN1-206ENST00000556809 TEX22C9J3V5 150 aa17.49■□□□□ 0.39
PABPN1-206ENST00000556809 E7EUB6 86 aa17.49■□□□□ 0.39
PABPN1-206ENST00000556809 IGKV1-5P01602 117 aa17.49■□□□□ 0.39
PABPN1-206ENST00000556809 IGLL1P15814 213 aa17.49■□□□□ 0.39
PABPN1-206ENST00000556809 MYCNOSP40205 109 aa17.49■□□□□ 0.39
PABPN1-206ENST00000556809 AKR1C2P52895 323 aa17.49■□□□□ 0.39
PABPN1-206ENST00000556809 SUPT4H1P63272 117 aaKnown RBP17.49■□□□□ 0.39
PABPN1-206ENST00000556809 CENPSQ8N2Z9 138 aa17.49■□□□□ 0.39
PABPN1-206ENST00000556809 RAX2Q96IS3 184 aa17.49■□□□□ 0.39
PABPN1-206ENST00000556809 NSG2Q9Y328 171 aa17.49■□□□□ 0.39
PABPN1-206ENST00000556809 A0A1B0GW64 132 aa17.48■□□□□ 0.39
PABPN1-206ENST00000556809 HMX3A6NHT5 357 aa17.48■□□□□ 0.39
PABPN1-206ENST00000556809 UPK1BO75841 260 aa17.48■□□□□ 0.39
PABPN1-206ENST00000556809 RAB9AP51151 201 aa17.48■□□□□ 0.39
PABPN1-206ENST00000556809 OR2B8PP59922 312 aa17.48■□□□□ 0.39
PABPN1-206ENST00000556809 TMEM128Q5BJH2 165 aa17.48■□□□□ 0.39
PABPN1-206ENST00000556809 LHFPL5Q8TAF8 219 aa17.48■□□□□ 0.39
PABPN1-206ENST00000556809 CASTOR1Q8WTX7 329 aa17.48■□□□□ 0.39
PABPN1-206ENST00000556809 PRNDQ9UKY0 176 aa17.48■□□□□ 0.39
PABPN1-206ENST00000556809 PRKDCP78527 4128 aaKnown RBP17.48■□□□□ 0.39
PABPN1-206ENST00000556809 CGB1A6NKQ9 187 aa17.47■□□□□ 0.39
PABPN1-206ENST00000556809 C15orf61A6NNL5 157 aa17.47■□□□□ 0.39
PABPN1-206ENST00000556809 H3BUA1 57 aa17.47■□□□□ 0.39
PABPN1-206ENST00000556809 P0C879 139 aa17.47■□□□□ 0.39
PABPN1-206ENST00000556809 ANXA3P12429 323 aa17.47■□□□□ 0.39
PABPN1-206ENST00000556809 TMEM187Q14656 261 aa17.47■□□□□ 0.39
PABPN1-206ENST00000556809 TMEM268Q5VZI3 342 aa17.47■□□□□ 0.39
PABPN1-206ENST00000556809 ZNF491Q8N8L2 437 aa17.47■□□□□ 0.39
PABPN1-206ENST00000556809 RBPMSQ93062 196 aaKnown RBP17.47■□□□□ 0.39
PABPN1-206ENST00000556809 UBE2E2Q96LR5 201 aa17.47■□□□□ 0.39
PABPN1-206ENST00000556809 TMEM56Q96MV1 263 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms