RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SEC14L6B5MCN3 397 aa9.38□□□□□ -0.91
SRP54-206ENST00000555317 GSTZ1O43708 216 aaPredicted RBP9.38□□□□□ -0.91
SRP54-206ENST00000555317 SNAPC5O75971 98 aa9.38□□□□□ -0.91
SRP54-206ENST00000555317 KRASP01116 189 aa9.38□□□□□ -0.91
SRP54-206ENST00000555317 DEFA4P12838 97 aa9.38□□□□□ -0.91
SRP54-206ENST00000555317 PIGPP57054 158 aa9.38□□□□□ -0.91
SRP54-206ENST00000555317 POU2AF1Q16633 256 aa9.38□□□□□ -0.91
SRP54-206ENST00000555317 SPANXN2Q5MJ10 180 aa9.38□□□□□ -0.91
SRP54-206ENST00000555317 FOXB2Q5VYV0 432 aa9.38□□□□□ -0.91
SRP54-206ENST00000555317 ADAD2Q8NCV1 583 aaKnown RBP9.38□□□□□ -0.91
SRP54-206ENST00000555317 OR4D10Q8NGI6 311 aa9.38□□□□□ -0.91
SRP54-206ENST00000555317 PRRT1Q99946 306 aa9.38□□□□□ -0.91
SRP54-206ENST00000555317 FAM212BQ9NTI7 297 aaPredicted RBP9.38□□□□□ -0.91
SRP54-206ENST00000555317 C14orf166Q9Y224 244 aaKnown RBP9.38□□□□□ -0.91
SRP54-206ENST00000555317 ZNF257Q9Y2Q1 563 aa9.38□□□□□ -0.91
SRP54-206ENST00000555317 HMX3A6NHT5 357 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 FAM223BA6NKX1 122 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 UPK2O00526 184 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 CYB5BO43169 146 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 ATG12O94817 140 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 BRI3O95415 125 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 HSPB1P04792 205 aaKnown RBP9.37□□□□□ -0.91
SRP54-206ENST00000555317 ZNF735P0CB33 412 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 PI3P19957 117 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 FAUP35544 74 aaKnown RBP9.37□□□□□ -0.91
SRP54-206ENST00000555317 G6PCP35575 357 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 AP3S2P59780 193 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 RND3P61587 244 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 RHOGP84095 191 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 ATP5G2Q06055 141 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 PDLIM3Q53GG5 364 aaPredicted RBP9.37□□□□□ -0.91
SRP54-206ENST00000555317 C9orf66Q5T8R8 295 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 THOC7Q6I9Y2 204 aaKnown RBP9.37□□□□□ -0.91
SRP54-206ENST00000555317 FAAP20Q6NZ36 180 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 LHFPL1Q86WI0 220 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 FAM223AQ8IWN6 122 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 TTC9CQ8N5M4 171 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 OR4C16Q8NGL9 310 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 OR13C8Q8NGS7 320 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 TSC22D3Q99576 134 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 QTRT1Q9BXR0 403 aaKnown RBP9.37□□□□□ -0.91
SRP54-206ENST00000555317 RANGRFQ9HD47 186 aaPredicted RBP9.37□□□□□ -0.91
SRP54-206ENST00000555317 MCUBQ9NWR8 336 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 NDUFA13Q9P0J0 144 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 SCP2D1Q9UJQ7 156 aa9.37□□□□□ -0.91
SRP54-206ENST00000555317 IGHV4OR15-8A0A075B7B6 117 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 A0A087WW49 117 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 ANKRD34BA5PLL1 514 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 NPIPB5A8MRT5 1133 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 TEX22C9J3V5 150 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 H0Y980 276 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 OVOL1O14753 267 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 RBMXL2O75526 392 aaKnown RBP9.36□□□□□ -0.91
SRP54-206ENST00000555317 PRH1P02810 166 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 PRB2P02812 416 aaPredicted RBP9.36□□□□□ -0.91
SRP54-206ENST00000555317 IL6RP08887 468 aaPredicted RBP9.36□□□□□ -0.91
SRP54-206ENST00000555317 FGF2P09038 288 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 ZP3P21754 424 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 HOXD3P31249 432 aaPredicted RBP9.36□□□□□ -0.91
SRP54-206ENST00000555317 SLURP1P55000 103 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 DEFA5Q01523 94 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 EXOSC2Q13868 293 aaKnown RBP9.36□□□□□ -0.91
SRP54-206ENST00000555317 H2BFWTQ7Z2G1 175 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 Q8N402 240 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 NECAP1Q8NC96 275 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 OR4A16Q8NH70 328 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 RNASE11Q8TAA1 199 aaKnown RBP9.36□□□□□ -0.91
SRP54-206ENST00000555317 MARCH1Q8TCQ1 289 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 THAP7Q9BT49 309 aaPredicted RBP9.36□□□□□ -0.91
SRP54-206ENST00000555317 HINT2Q9BX68 163 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 KRTAP3-3Q9BYR6 98 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 KRTAP3-2Q9BYR7 98 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 FKBP11Q9NYL4 201 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 PRNDQ9UKY0 176 aa9.36□□□□□ -0.91
SRP54-206ENST00000555317 DNAH3Q8TD57 4116 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 TRAV3A0A0B4J244 114 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 TEX13DA0A0J9YY54 714 aaPredicted RBP9.35□□□□□ -0.91
SRP54-206ENST00000555317 ANKRD20A5PA0PJZ0 165 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 WIPF1O43516 503 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 B3GALNT1O75752 331 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 REG1AP05451 166 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 CTSDP07339 412 aaPredicted RBP9.35□□□□□ -0.91
SRP54-206ENST00000555317 TRAPPC2P0DI81 140 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 TRAPPC2BP0DI82 140 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 AREGP15514 252 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 HIST1H1BP16401 226 aaKnown RBP9.35□□□□□ -0.91
SRP54-206ENST00000555317 PTBP1P26599 531 aaKnown RBP eCLIP9.35□□□□□ -0.91
SRP54-206ENST00000555317 PSMB6P28072 239 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 INPP1P49441 399 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 MECP2P51608 486 aaKnown RBP9.35□□□□□ -0.91
SRP54-206ENST00000555317 AKR1C2P52895 323 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 OR2B8PP59922 312 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 SURF2Q15527 256 aaPredicted RBP9.35□□□□□ -0.91
SRP54-206ENST00000555317 TRIM16LQ309B1 348 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 ZNF585BQ52M93 769 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 FAM209BQ5JX69 171 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 HSD17B13Q7Z5P4 300 aaPredicted RBP9.35□□□□□ -0.91
SRP54-206ENST00000555317 OR51S1Q8NGJ8 323 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 OR1L8Q8NGR8 309 aa9.35□□□□□ -0.91
SRP54-206ENST00000555317 DCUN1D4Q92564 292 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms