RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 OR2A7Q96R45 310 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 C20orf24Q9BUV8 137 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 OR2T8A6NH00 312 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 CGB1A6NKQ9 187 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 K7EMT4 169 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 NDUFA4O00483 81 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 MYL12AP19105 171 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 TNP2Q05952 138 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 C12orf74Q32Q52 190 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 OR2B11Q5JQS5 317 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 ZNF767PQ75MW2 155 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 PUSL1Q8N0Z8 303 aaKnown RBP6.95□□□□□ -1.3
SCFD1-215ENST00000555259 URM1Q9BTM9 101 aaKnown RBP6.95□□□□□ -1.3
SCFD1-215ENST00000555259 CELA1Q9UNI1 258 aa6.95□□□□□ -1.3
SCFD1-215ENST00000555259 IGKV3-7A0A075B6H7 116 aa6.94□□□□□ -1.3
SCFD1-215ENST00000555259 ZNF705EA8MWA4 302 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-215ENST00000555259 WBP4O75554 376 aaKnown RBP6.94□□□□□ -1.3
SCFD1-215ENST00000555259 DIRAS3O95661 229 aa6.94□□□□□ -1.3
SCFD1-215ENST00000555259 BPNT1O95861 308 aa6.94□□□□□ -1.3
SCFD1-215ENST00000555259 IFNA21P01568 189 aa6.94□□□□□ -1.3
SCFD1-215ENST00000555259 IFNA17P01571 189 aa6.94□□□□□ -1.3
SCFD1-215ENST00000555259 GIG44P09565 113 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-215ENST00000555259 MAPK3P27361 379 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-215ENST00000555259 KCTD9Q7L273 389 aa6.94□□□□□ -1.3
SCFD1-215ENST00000555259 LRRTM1Q86UE6 522 aa6.94□□□□□ -1.3
SCFD1-215ENST00000555259 UBE2DNLQ8IWF7 75 aa6.94□□□□□ -1.3
SCFD1-215ENST00000555259 BSCL2Q96G97 398 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-215ENST00000555259 PECRQ9BY49 303 aa6.94□□□□□ -1.3
SCFD1-215ENST00000555259 THYN1Q9P016 225 aa6.94□□□□□ -1.3
SCFD1-215ENST00000555259 SMPXQ9UHP9 88 aa6.94□□□□□ -1.3
SCFD1-215ENST00000555259 DIMT1Q9UNQ2 313 aaKnown RBP6.94□□□□□ -1.3
SCFD1-215ENST00000555259 MRPS7Q9Y2R9 242 aaKnown RBP6.94□□□□□ -1.3
SCFD1-215ENST00000555259 X6R8D5 127 aa6.94□□□□□ -1.3
SCFD1-215ENST00000555259 FAT1Q14517 4588 aa6.94□□□□□ -1.3
SCFD1-215ENST00000555259 C15orf62A8K5M9 175 aa6.93□□□□□ -1.3
SCFD1-215ENST00000555259 RAB27BO00194 218 aa6.93□□□□□ -1.3
SCFD1-215ENST00000555259 CHEK1O14757 476 aa6.93□□□□□ -1.3
SCFD1-215ENST00000555259 CRHBPP24387 322 aa6.93□□□□□ -1.3
SCFD1-215ENST00000555259 TAS2R43P59537 309 aa6.93□□□□□ -1.3
SCFD1-215ENST00000555259 RPL30P62888 115 aaKnown RBP6.93□□□□□ -1.3
SCFD1-215ENST00000555259 RPL8P62917 257 aaKnown RBP6.93□□□□□ -1.3
SCFD1-215ENST00000555259 INSL4Q14641 139 aa6.93□□□□□ -1.3
SCFD1-215ENST00000555259 PLAC9Q5JTB6 97 aa6.93□□□□□ -1.3
SCFD1-215ENST00000555259 LEMD1Q68G75 181 aa6.93□□□□□ -1.3
SCFD1-215ENST00000555259 SPSB3Q6PJ21 355 aa6.93□□□□□ -1.3
SCFD1-215ENST00000555259 GBGT1Q8N5D6 347 aa6.93□□□□□ -1.3
SCFD1-215ENST00000555259 VN1R17PQ8TDU5 208 aa6.93□□□□□ -1.3
SCFD1-215ENST00000555259 GINS4Q9BRT9 223 aa6.93□□□□□ -1.3
SCFD1-215ENST00000555259 RHPN1-AS1Q9BWJ2 59 aa6.93□□□□□ -1.3
SCFD1-215ENST00000555259 PRELID3BQ9Y3B1 194 aa6.93□□□□□ -1.3
SCFD1-215ENST00000555259 LOC100130705A0A1B0GUX0 176 aa6.92□□□□□ -1.3
SCFD1-215ENST00000555259 IGLC7A0M8Q6 106 aa6.92□□□□□ -1.3
SCFD1-215ENST00000555259 IRGMA1A4Y4 181 aa6.92□□□□□ -1.3
SCFD1-215ENST00000555259 CDK1P06493 297 aa6.92□□□□□ -1.3
SCFD1-215ENST00000555259 FCGR3AP08637 254 aa6.92□□□□□ -1.3
SCFD1-215ENST00000555259 HLA-GP17693 338 aa6.92□□□□□ -1.3
SCFD1-215ENST00000555259 RBM48Q5RL73 367 aaKnown RBP6.92□□□□□ -1.3
SCFD1-215ENST00000555259 C1orf146Q5VVC0 180 aa6.92□□□□□ -1.3
SCFD1-215ENST00000555259 LIPKQ5VXJ0 399 aa6.92□□□□□ -1.3
SCFD1-215ENST00000555259 FAM90A2PQ658T7 463 aa6.92□□□□□ -1.3
SCFD1-215ENST00000555259 H1FOOQ8IZA3 346 aaPredicted RBP6.92□□□□□ -1.3
SCFD1-215ENST00000555259 CBR4Q8N4T8 237 aa6.92□□□□□ -1.3
SCFD1-215ENST00000555259 OR4S2Q8NH73 311 aa6.92□□□□□ -1.3
SCFD1-215ENST00000555259 AGRNO00468 2067 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 IGHV3-49A0A0A0MS15 119 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 IGHV7-4-1A0A0J9YVY3 117 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 CD1AP06126 327 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 CD37P11049 281 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 DEFB131AP59861 70 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 OR2B8PP59922 312 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 MRPS15P82914 257 aaKnown RBP6.91□□□□□ -1.3
SCFD1-215ENST00000555259 TMEM41BQ5BJD5 291 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 STHQ8IWL8 128 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 TMEM116Q8NCL8 245 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 MAFIPQ8WZ33 124 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 PHYHIPQ92561 330 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 CMTM3Q96MX0 182 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 KCNK7Q9Y2U2 307 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 F8W735 103 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-215ENST00000555259 J3QRK9 145 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 DFFBO76075 338 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 IGLV2-14P01704 120 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 CD36P16671 472 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 C4BPBP20851 252 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 BRWD1-AS2P59051 145 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 PAFAH1B2P68402 229 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 P2RY14Q15391 338 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 RNF212Q495C1 297 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 ACSM3Q53FZ2 586 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 TMEM80Q96HE8 168 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 ZNF414Q96IQ9 312 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 TBC1D24Q9ULP9 559 aa6.91□□□□□ -1.3
SCFD1-215ENST00000555259 RBMX2Q9Y388 322 aaKnown RBP6.91□□□□□ -1.3
SCFD1-215ENST00000555259 NACAE9PAV3 2078 aa6.9□□□□□ -1.3
SCFD1-215ENST00000555259 SSX1Q16384 188 aa6.9□□□□□ -1.31
SCFD1-215ENST00000555259 MORN3Q6PF18 240 aaPredicted RBP6.9□□□□□ -1.31
SCFD1-215ENST00000555259 ZNF367Q7RTV3 350 aa6.9□□□□□ -1.31
SCFD1-215ENST00000555259 TRPT1Q86TN4 253 aaKnown RBP6.9□□□□□ -1.31
SCFD1-215ENST00000555259 UBAC2Q8NBM4 344 aa6.9□□□□□ -1.31
SCFD1-215ENST00000555259 OR56B1Q8NGI3 324 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms