RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 FCGR3BO75015 233 aa13.9□□□□□ -0.18
PCNX1-209ENST00000554879 PRAMEF5Q5TYX0 476 aa13.9□□□□□ -0.18
PCNX1-209ENST00000554879 GBGT1Q8N5D6 347 aa13.9□□□□□ -0.18
PCNX1-209ENST00000554879 POC1AQ8NBT0 407 aa13.89□□□□□ -0.19
PCNX1-209ENST00000554879 MRPL30Q8TCC3 161 aaKnown RBP13.89□□□□□ -0.19
PCNX1-209ENST00000554879 CACNG5Q9UF02 275 aa13.89□□□□□ -0.19
PCNX1-209ENST00000554879 LAMTOR2Q9Y2Q5 125 aa13.89□□□□□ -0.19
PCNX1-209ENST00000554879 A0A1B0GUS0 222 aa13.89□□□□□ -0.19
PCNX1-209ENST00000554879 B4DEV8 164 aa13.89□□□□□ -0.19
PCNX1-209ENST00000554879 SPINK9Q5DT21 86 aa13.89□□□□□ -0.19
PCNX1-209ENST00000554879 TMEM230Q96A57 120 aa13.89□□□□□ -0.19
PCNX1-209ENST00000554879 GNPNAT1Q96EK6 184 aaPredicted RBP13.89□□□□□ -0.19
PCNX1-209ENST00000554879 PLSCR2Q9NRY7 297 aa13.89□□□□□ -0.19
PCNX1-209ENST00000554879 TRAV38-1A0A0B4J264 116 aa13.89□□□□□ -0.19
PCNX1-209ENST00000554879 CRYM-AS1A6NIL9 109 aa13.89□□□□□ -0.19
PCNX1-209ENST00000554879 LRRC10Q5BKY1 277 aa13.89□□□□□ -0.19
PCNX1-209ENST00000554879 VKORC1Q9BQB6 163 aa13.89□□□□□ -0.19
PCNX1-209ENST00000554879 KIAA1456Q9P272 454 aa13.89□□□□□ -0.19
PCNX1-209ENST00000554879 POLR3KQ9Y2Y1 108 aaPredicted RBP13.89□□□□□ -0.19
PCNX1-209ENST00000554879 SRP19P09132 144 aaKnown RBP13.89□□□□□ -0.19
PCNX1-209ENST00000554879 KITLGP21583 273 aa13.89□□□□□ -0.19
PCNX1-209ENST00000554879 BMI1P35226 326 aa13.89□□□□□ -0.19
PCNX1-209ENST00000554879 PNRC1Q12796 327 aaPredicted RBP13.89□□□□□ -0.19
PCNX1-209ENST00000554879 SLC35E3Q7Z769 313 aa13.89□□□□□ -0.19
PCNX1-209ENST00000554879 FGF23Q9GZV9 251 aaPredicted RBP13.89□□□□□ -0.19
PCNX1-209ENST00000554879 CLDN14O95500 239 aa13.88□□□□□ -0.19
PCNX1-209ENST00000554879 GAGE1Q13065 139 aa13.88□□□□□ -0.19
PCNX1-209ENST00000554879 OR4A16Q8NH70 328 aa13.88□□□□□ -0.19
PCNX1-209ENST00000554879 IGKV1D-13A0A0B4J2D9 117 aa13.88□□□□□ -0.19
PCNX1-209ENST00000554879 PSPNO60542 156 aa13.88□□□□□ -0.19
PCNX1-209ENST00000554879 IGKV1-13P0DP09 117 aa13.88□□□□□ -0.19
PCNX1-209ENST00000554879 SMIM12Q96EX1 92 aa13.88□□□□□ -0.19
PCNX1-209ENST00000554879 UQCR10Q9UDW1 63 aa13.88□□□□□ -0.19
PCNX1-209ENST00000554879 ODAMA1E959 279 aa13.88□□□□□ -0.19
PCNX1-209ENST00000554879 GZMHP20718 246 aa13.88□□□□□ -0.19
PCNX1-209ENST00000554879 OR2C3Q8N628 320 aa13.88□□□□□ -0.19
PCNX1-209ENST00000554879 OR5D13Q8NGL4 314 aa13.88□□□□□ -0.19
PCNX1-209ENST00000554879 OR10X1Q8NGY0 326 aa13.88□□□□□ -0.19
PCNX1-209ENST00000554879 SRD5A3Q9H8P0 318 aa13.88□□□□□ -0.19
PCNX1-209ENST00000554879 CPAMD8Q8IZJ3 1885 aa13.87□□□□□ -0.19
PCNX1-209ENST00000554879 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.87□□□□□ -0.19
PCNX1-209ENST00000554879 MGST3O14880 152 aa13.87□□□□□ -0.19
PCNX1-209ENST00000554879 CCL25O15444 150 aa13.87□□□□□ -0.19
PCNX1-209ENST00000554879 ACTL6BO94805 426 aa13.87□□□□□ -0.19
PCNX1-209ENST00000554879 GAPDHP04406 335 aaKnown RBP13.87□□□□□ -0.19
PCNX1-209ENST00000554879 WDR86Q86TI4 376 aa13.87□□□□□ -0.19
PCNX1-209ENST00000554879 C12orf77C9JDV5 145 aa13.87□□□□□ -0.19
PCNX1-209ENST00000554879 OR7C2O60412 319 aa13.87□□□□□ -0.19
PCNX1-209ENST00000554879 TIMD4Q96H15 378 aa13.87□□□□□ -0.19
PCNX1-209ENST00000554879 S1PR3Q99500 378 aa13.87□□□□□ -0.19
PCNX1-209ENST00000554879 METRNQ9UJH8 293 aa13.87□□□□□ -0.19
PCNX1-209ENST00000554879 PPIAL4EA0A075B759 164 aa13.87□□□□□ -0.19
PCNX1-209ENST00000554879 PPIAL4DF5H284 164 aa13.87□□□□□ -0.19
PCNX1-209ENST00000554879 PPIAL4FP0DN26 164 aa13.87□□□□□ -0.19
PCNX1-209ENST00000554879 TMEM256Q8N2U0 113 aa13.87□□□□□ -0.19
PCNX1-209ENST00000554879 ACY3Q96HD9 319 aa13.87□□□□□ -0.19
PCNX1-209ENST00000554879 HEYLQ9NQ87 328 aaPredicted RBP13.87□□□□□ -0.19
PCNX1-209ENST00000554879 RNF115Q9Y4L5 304 aa13.87□□□□□ -0.19
PCNX1-209ENST00000554879 Q6ZR03 302 aa13.87□□□□□ -0.19
PCNX1-209ENST00000554879 FAM216BQ8N7L0 139 aa13.87□□□□□ -0.19
PCNX1-209ENST00000554879 DOCK11Q5JSL3 2073 aa13.86□□□□□ -0.19
PCNX1-209ENST00000554879 FCN1O00602 326 aa13.86□□□□□ -0.19
PCNX1-209ENST00000554879 F2RP25116 425 aa13.86□□□□□ -0.19
PCNX1-209ENST00000554879 UBE2V1Q13404 147 aa13.86□□□□□ -0.19
PCNX1-209ENST00000554879 C20orf204Q6ZNR8 217 aa13.86□□□□□ -0.19
PCNX1-209ENST00000554879 OR13A1Q8NGR1 328 aa13.86□□□□□ -0.19
PCNX1-209ENST00000554879 MANBALQ9NQG1 85 aa13.86□□□□□ -0.19
PCNX1-209ENST00000554879 RPL31P62899 125 aaKnown RBP13.86□□□□□ -0.19
PCNX1-209ENST00000554879 ASCL4Q6XD76 172 aa13.86□□□□□ -0.19
PCNX1-209ENST00000554879 DPRXA6NFQ7 191 aa13.86□□□□□ -0.19
PCNX1-209ENST00000554879 NEUROG1Q92886 237 aa13.86□□□□□ -0.19
PCNX1-209ENST00000554879 ST6GALNAC6Q969X2 333 aa13.86□□□□□ -0.19
PCNX1-209ENST00000554879 PARLQ9H300 379 aa13.86□□□□□ -0.19
PCNX1-209ENST00000554879 UBTD1Q9HAC8 227 aa13.86□□□□□ -0.19
PCNX1-209ENST00000554879 PGLYRP1O75594 196 aaPredicted RBP13.85□□□□□ -0.19
PCNX1-209ENST00000554879 VDAC1P21796 283 aa13.85□□□□□ -0.19
PCNX1-209ENST00000554879 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.85□□□□□ -0.193e-6■■■■□ 21.6
PCNX1-209ENST00000554879 hADV38S2A0JD32 116 aa13.85□□□□□ -0.19
PCNX1-209ENST00000554879 COMPP49747 757 aaPredicted RBP13.85□□□□□ -0.19
PCNX1-209ENST00000554879 DYNLT3P51808 116 aa13.85□□□□□ -0.19
PCNX1-209ENST00000554879 NIT1Q86X76 327 aa13.85□□□□□ -0.19
PCNX1-209ENST00000554879 SSC4DQ8WTU2 575 aa13.85□□□□□ -0.19
PCNX1-209ENST00000554879 USF1P22415 310 aaPredicted RBP13.85□□□□□ -0.19
PCNX1-209ENST00000554879 CDKN1BP46527 198 aa13.85□□□□□ -0.19
PCNX1-209ENST00000554879 PLGLAQ15195 96 aa13.85□□□□□ -0.19
PCNX1-209ENST00000554879 Q8NA96 180 aa13.85□□□□□ -0.19
PCNX1-209ENST00000554879 TMEM171Q8WVE6 324 aa13.85□□□□□ -0.19
PCNX1-209ENST00000554879 SLC25A10Q9UBX3 287 aaPredicted RBP13.85□□□□□ -0.19
PCNX1-209ENST00000554879 DMDP11532 3685 aa13.85□□□□□ -0.19
PCNX1-209ENST00000554879 ZNF737O75373 536 aa13.84□□□□□ -0.19
PCNX1-209ENST00000554879 CD99P14209 185 aa13.84□□□□□ -0.19
PCNX1-209ENST00000554879 EWSR1Q01844 656 aaKnown RBP eCLIP13.84□□□□□ -0.19
PCNX1-209ENST00000554879 MUC15Q8N387 334 aa13.84□□□□□ -0.19
PCNX1-209ENST00000554879 DEDDO75618 318 aa13.84□□□□□ -0.19
PCNX1-209ENST00000554879 CGAP01215 116 aa13.84□□□□□ -0.19
PCNX1-209ENST00000554879 Q56UQ5 140 aa13.84□□□□□ -0.19
PCNX1-209ENST00000554879 DNM1P46Q6ZS02 220 aa13.84□□□□□ -0.19
PCNX1-209ENST00000554879 OR52M1Q8NGK5 317 aa13.84□□□□□ -0.19
PCNX1-209ENST00000554879 TMEM222Q9H0R3 208 aa13.84□□□□□ -0.19
PCNX1-209ENST00000554879 LYNX1G3V0Z9 82 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms