RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 MGST2Q99735 147 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 ATG101Q9BSB4 218 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 SAMD10Q9BYL1 202 aa7.89□□□□□ -1.15
SYNE2-213ENST00000554805 CDX4O14627 284 aaPredicted RBP7.88□□□□□ -1.15
SYNE2-213ENST00000554805 MPDU1O75352 247 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 SFTPCP11686 197 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 ZNF83P51522 516 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 HTD2P86397 168 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 TRIP6Q15654 476 aaKnown RBP7.88□□□□□ -1.15
SYNE2-213ENST00000554805 FAM201AQ5SY85 155 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 TOMM20LQ6UXN7 152 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 MOGAT3Q86VF5 341 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 GBGT1Q8N5D6 347 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 GGTLC1Q9BX51 225 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 ATRXP46100 2492 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 MKRN2OSH3BPM6 223 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 TCAPO15273 167 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 G0S2P27469 103 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 OPRK1P41145 380 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 MZT1Q08AG7 82 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 SRSF6Q13247 344 aaKnown RBP7.88□□□□□ -1.15
SYNE2-213ENST00000554805 EIF4EBP1Q13541 118 aaPredicted RBP7.88□□□□□ -1.15
SYNE2-213ENST00000554805 VWC2Q2TAL6 325 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 MORN2Q502X0 79 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 TRAT1Q6PIZ9 186 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 LYG1Q8N1E2 194 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 C9orf106Q8NAJ2 232 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 TBX15Q96SF7 602 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 OPN3Q9H1Y3 402 aaPredicted RBP7.88□□□□□ -1.15
SYNE2-213ENST00000554805 NPVFQ9HCQ7 196 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 NAGKQ9UJ70 344 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 ZNF292O60281 2723 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 NKX2-8O15522 239 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 TYMSP04818 313 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 IL6RP08887 468 aaPredicted RBP7.88□□□□□ -1.15
SYNE2-213ENST00000554805 NPY1RP25929 384 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 GCHFRP30047 84 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 ADMP35318 185 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 RPL29P47914 159 aaKnown RBP7.88□□□□□ -1.15
SYNE2-213ENST00000554805 GNG10P50151 68 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 BPIFB3P59826 476 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 ERVFC1-1P60608 527 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 RHOBP62745 196 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 RPL31P62899 125 aaKnown RBP7.88□□□□□ -1.15
SYNE2-213ENST00000554805 WDR31Q8NA23 367 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 SVIPQ8NHG7 77 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 PRR7Q8TB68 274 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 LRFN3Q9BTN0 628 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 SPENQ96T58 3664 aaKnown RBP7.88□□□□□ -1.15
SYNE2-213ENST00000554805 CACNA1BQ00975 2339 aa7.88□□□□□ -1.15
SYNE2-213ENST00000554805 FCN1O00602 326 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 COL8A2P25067 703 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 IER3P46695 156 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 OR4S2Q8NH73 311 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 PLEKHA3Q9HB20 300 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 ELOVL5Q9NYP7 299 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 KALRNO60229 2985 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 C15orf65H3BRN8 121 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 M0R1B8 84 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 MGST3O14880 152 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 NUPR1O60356 82 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 STAG3L2P0CL84 134 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 STAG3L3P0CL85 134 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 CD59P13987 128 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 SELLP14151 372 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 MYOD1P15172 320 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 CRISP2P16562 243 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 TNFSF10P50591 281 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 TEPPQ6URK8 271 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 STPG3Q8N7X2 389 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 OR1L6Q8NGR2 347 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 SERTAD4Q9NUC0 356 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 YTHDF2Q9Y5A9 579 aaKnown RBP7.87□□□□□ -1.15
SYNE2-213ENST00000554805 IGHV2OR16-5A0A0B4J2B6 119 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 EREGO14944 169 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 OR7C2O60412 319 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 GFRA3O60609 400 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 PROP1O75360 226 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 FOXH1O75593 365 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 ZNF883P0CG24 379 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 CD99P14209 185 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 KIR2DL2P43627 348 aaPredicted RBP7.87□□□□□ -1.15
SYNE2-213ENST00000554805 RELQ04864 619 aaPredicted RBP7.87□□□□□ -1.15
SYNE2-213ENST00000554805 OR5I1Q13606 314 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 PSG5Q15238 335 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 BATFQ16520 125 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 LBHQ53QV2 105 aaPredicted RBP7.87□□□□□ -1.15
SYNE2-213ENST00000554805 ANKRD39Q53RE8 183 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 TEX38Q6PEX7 206 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 SLC24A4Q8NFF2 622 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 FAM122AQ96E09 287 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 FAM103A1Q9BTL3 118 aaKnown RBP7.87□□□□□ -1.15
SYNE2-213ENST00000554805 SEPSECSQ9HD40 501 aaKnown RBP7.87□□□□□ -1.15
SYNE2-213ENST00000554805 CALYQ9NYX4 217 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 JPT1Q9UK76 154 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 PROCRQ9UNN8 238 aa7.87□□□□□ -1.15
SYNE2-213ENST00000554805 ANKRD11Q6UB99 2663 aaPredicted RBP7.87□□□□□ -1.15
SYNE2-213ENST00000554805 TRBV20OR9-2A0A075B6H5 130 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 TCL1AP56279 114 aa7.86□□□□□ -1.15
SYNE2-213ENST00000554805 TPPP2P59282 170 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms