RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 TVP23BQ9NYZ1 205 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 TPRKBQ9Y3C4 175 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 ADGRG4Q8IZF6 3080 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 ANKHD1Q8IWZ3 2542 aaKnown RBP2.22□□□□□ -2.05
PRPF39-206ENST00000554429 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.22□□□□□ -2.05
PRPF39-206ENST00000554429 J3KT08 172 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 TNFRSF11BO00300 401 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 ETV2O00321 342 aaPredicted RBP2.22□□□□□ -2.05
PRPF39-206ENST00000554429 PDCD5O14737 125 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 EEDO75530 441 aaKnown RBP2.22□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF432O94892 652 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 CSN2P05814 226 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 MYL12AP19105 171 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 CXCL2P19875 107 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 MYL9P24844 172 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 SFTPDP35247 375 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 EMDP50402 254 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 DSCR4P56555 118 aaPredicted RBP2.22□□□□□ -2.05
PRPF39-206ENST00000554429 RPS25P62851 125 aaKnown RBP2.22□□□□□ -2.05
PRPF39-206ENST00000554429 SELENOWP63302 87 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 AKR1C1Q04828 323 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 RHEBQ15382 184 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 GUCA2BQ16661 112 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 AWAT1Q58HT5 328 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF684Q5T5D7 378 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 PRSS54Q6PEW0 395 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 RASL11AQ6T310 242 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 GLIPR1L1Q6UWM5 242 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 GSG1LQ6UXU4 331 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 DGAT2L6Q6ZPD8 337 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 Q6ZRG5 221 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 CBLN2Q8IUK8 224 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF440Q8IYI8 595 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 ZCCHC24Q8N2G6 241 aaKnown RBP2.22□□□□□ -2.05
PRPF39-206ENST00000554429 CIARTQ8N365 385 aaPredicted RBP2.22□□□□□ -2.05
PRPF39-206ENST00000554429 OR10G7Q8NGN6 311 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 OR1J4Q8NGS1 313 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 OR2K2Q8NGT1 345 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 OR2T27Q8NH04 317 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 LINC01560Q8TB33 94 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF418Q8TF45 676 aaPredicted RBP2.22□□□□□ -2.05
PRPF39-206ENST00000554429 TMEM101Q96IK0 257 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 ADGRG7Q96K78 797 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 SMIM8Q96KF7 97 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 GPER1Q99527 375 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 APOL4Q9BPW4 351 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 HSPB9Q9BQS6 159 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 POLR2J2Q9GZM3 115 aaKnown RBP2.22□□□□□ -2.05
PRPF39-206ENST00000554429 TMEM126AQ9H061 195 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 RBKSQ9H477 322 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF442Q9H7R0 627 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 NTMQ9P121 344 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 DSCAMO60469 2012 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
PRPF39-206ENST00000554429 FN1P02751 2386 aaKnown RBP2.21□□□□□ -2.06
PRPF39-206ENST00000554429 TRAV39A0A0B4J263 110 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 OR2M5A3KFT3 312 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 MSGN1A6NI15 193 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 BBIP1A8MTZ0 92 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 NPIPB9F8W1W9 429 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 C16orf97H3BN30 126 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 RNASET2O00584 256 aaKnown RBP2.21□□□□□ -2.06
PRPF39-206ENST00000554429 FABP7O15540 132 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 HPRT1P00492 218 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 MRPL3P09001 348 aaKnown RBP2.21□□□□□ -2.06
PRPF39-206ENST00000554429 FAM157CP0CG43 387 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 TRAPPC2P0DI81 140 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 TRAPPC2BP0DI82 140 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 VSIG10L2P0DP72 767 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 SLC2A2P11168 524 aaPredicted RBP2.21□□□□□ -2.06
PRPF39-206ENST00000554429 CHATP28329 748 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 PPIFP30405 207 aaKnown RBP2.21□□□□□ -2.06
PRPF39-206ENST00000554429 CLDN17P56750 224 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 RBM11P57052 281 aaKnown RBP2.21□□□□□ -2.06
PRPF39-206ENST00000554429 FOXF2Q12947 444 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 GPR50Q13585 617 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 ZNF79Q15937 498 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 SSX1Q16384 188 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 CR1LQ2VPA4 569 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 ACOT6Q3I5F7 207 aaPredicted RBP2.21□□□□□ -2.06
PRPF39-206ENST00000554429 ZFAND6Q6FIF0 208 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 TOMM20LQ6UXN7 152 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 C16orf47Q6ZP98 133 aaPredicted RBP2.21□□□□□ -2.06
PRPF39-206ENST00000554429 PRSS48Q7RTY5 328 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 ZNF433Q8N7K0 673 aaPredicted RBP2.21□□□□□ -2.06
PRPF39-206ENST00000554429 OR10G2Q8NGC3 310 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 OR5D16Q8NGK9 328 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 OR52P1PQ8NH57 321 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 MFSD8Q8NHS3 518 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 FGFBP3Q8TAT2 258 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 THEM6Q8WUY1 208 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 S100ZQ8WXG8 99 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 SMR3AQ99954 134 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 PDCD1LG2Q9BQ51 273 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 PSMG3Q9BT73 122 aaPredicted RBP2.21□□□□□ -2.06
PRPF39-206ENST00000554429 DERL1Q9BUN8 251 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 OR8D2Q9GZM6 311 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 NPFFR1Q9GZQ6 430 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 VSIRQ9H7M9 311 aa2.21□□□□□ -2.06
PRPF39-206ENST00000554429 NRN1Q9NPD7 142 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms