RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 CYTL1Q9NRR1 136 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 GPR173Q9NS66 373 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 RCC2Q9P258 522 aaKnown RBP4.4□□□□□ -1.71
ATXN3-226ENST00000554350 ZNF230Q9UIE0 474 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-226ENST00000554350 TMED3Q9Y3Q3 217 aa4.4□□□□□ -1.71
ATXN3-226ENST00000554350 IGKV1-27A0A075B6S5 117 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 TRAV38-1A0A0B4J264 116 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 IGKV1-12A0A0C4DH73 117 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 C13orf42A0A1B0GVH6 325 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 FAM230AA0A1W2PPH8 454 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 PSMB11A5LHX3 300 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 A6NDX4 124 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 MPTX1A8MV57 137 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 FAM25EA8MYX2 175 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 E5RGE8 158 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 CCSO14618 274 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 NDUFA2O43678 99 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 CDS2O95674 445 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 NAPSAO96009 420 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 IGKV1D-12P01611 117 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 ZNF728P0DKX0 622 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 IGHV4-30-4P0DP06 118 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 PGAM2P15259 253 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 KITLGP21583 273 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 GLP1RP43220 463 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 RAB5CP51148 216 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 SUMO2P61956 95 aaKnown RBP4.39□□□□□ -1.71
ATXN3-226ENST00000554350 IL24Q13007 206 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 TMEM187Q14656 261 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 SMCO1Q147U7 214 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 KIR2DS1Q14954 304 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 DEFB136Q30KP8 78 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 C9orf152Q5JTZ5 239 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 C10orf91Q5T1B1 145 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 PRAMEF6Q5VXH4 476 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 C6orf201Q7Z4U5 140 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 ZNF573Q86YE8 665 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 Q8IYB0 196 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 SPAG16Q8N0X2 631 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 LGI3Q8N145 548 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 COMMD1Q8N668 190 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 UBAC2Q8NBM4 344 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 BHLHE23Q8NDY6 225 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 OR5T2Q8NGG2 359 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 OR5D18Q8NGL1 313 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 LYPD6BQ8NI32 183 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 LHFPL5Q8TAF8 219 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 DCUN1D4Q92564 292 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 TNFRSF14Q92956 283 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 SMIM8Q96KF7 97 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 CXorf58Q96LI9 332 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 HIST1H2AAQ96QV6 131 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 SULT4A1Q9BR01 284 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 FAAP24Q9BTP7 215 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 SLC5A7Q9GZV3 580 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 ARV1Q9H2C2 271 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 HIPK2Q9H2X6 1198 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 NAA60Q9H7X0 242 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 ELL3Q9HB65 397 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-226ENST00000554350 TAS2R3Q9NYW6 316 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 AK3Q9UIJ7 227 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 ST3GAL6Q9Y274 331 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 NSG2Q9Y328 171 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 STARD10Q9Y365 291 aa4.39□□□□□ -1.71
ATXN3-226ENST00000554350 IGHV3OR15-7A0A075B7D8 119 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 IGKV1D-8A0A087WSZ0 117 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 TMEM218A2RU14 115 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 OOEPA6NGQ2 149 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 NKX6-3A6NJ46 265 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 ZNF850A8MQ14 1090 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 NPIPB11E5RHQ5 1161 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 SDCBPO00560 298 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-226ENST00000554350 GEMIN2O14893 280 aaKnown RBP4.38□□□□□ -1.71
ATXN3-226ENST00000554350 FCN3O75636 299 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 ADAP1O75689 374 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 TUSC2O75896 110 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 SEC11BP0C7V7 166 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 SLC25A6P12236 298 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 GP9P14770 177 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 GABRR1P24046 479 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 P2RY1P47900 373 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 KCNJ3P48549 501 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 SULT1A2P50226 295 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 PIGPP57054 158 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 TIRAPP58753 221 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 GNG3P63215 75 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 PJVKQ0ZLH3 352 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 RAB32Q13637 225 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 IAH1Q2TAA2 248 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-226ENST00000554350 LRRC37A5PQ49AS3 106 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 ABCA11PQ4W5N1 156 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 FAM76BQ5HYJ3 339 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 GGNBP1Q5YKI7 109 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 PLCXD3Q63HM9 321 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 OR2T2Q6IF00 324 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 ZNF880Q6PDB4 577 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 FBXW12Q6X9E4 464 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 MRPL21Q7Z2W9 205 aaKnown RBP4.38□□□□□ -1.71
ATXN3-226ENST00000554350 ZNF329Q86UD4 541 aa4.38□□□□□ -1.71
ATXN3-226ENST00000554350 ZNF695Q8IW36 515 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms