RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 C5orf66Q9H5L9 145 aa10.22□□□□□ -0.77
SHMT2-211ENST00000554310 NECAP2Q9NVZ3 263 aa10.22□□□□□ -0.77
SHMT2-211ENST00000554310 WSB1Q9Y6I7 421 aa10.22□□□□□ -0.77
SHMT2-211ENST00000554310 DBX1A6NMT0 343 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 G3V318 75 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 SFT2D2O95562 160 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 IGLV1-40P01703 118 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 RRASP10301 218 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 IGLL1P15814 213 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 AKR1C4P17516 323 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 LGALS7P47929 136 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 LUMP51884 338 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-211ENST00000554310 LINC00205P59089 165 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 FGL1Q08830 312 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 ECSCRQ19T08 205 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 TMEM177Q53S58 311 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 C19orf54Q5BKX5 351 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 TMEM65Q6PI78 240 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 DHRS11Q6UWP2 260 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 LCNL1Q6ZST4 164 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 ZNF645Q8N7E2 425 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 ABHD5Q8WTS1 349 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 C4orf3Q8WVX3 66 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 HARBI1Q96MB7 349 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 P2RX4Q99571 388 aa10.21□□□□□ -0.77
SHMT2-211ENST00000554310 RTBDNQ9BSG5 229 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-211ENST00000554310 SLC25A17O43808 307 aa10.2□□□□□ -0.78
SHMT2-211ENST00000554310 CA2P00918 260 aa10.2□□□□□ -0.78
SHMT2-211ENST00000554310 CTSDP07339 412 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-211ENST00000554310 NFYAP23511 347 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-211ENST00000554310 VAMP1P23763 118 aa10.2□□□□□ -0.78
SHMT2-211ENST00000554310 DUTP33316 252 aaKnown RBP10.2□□□□□ -0.78
SHMT2-211ENST00000554310 ZNF562Q6V9R5 426 aa10.2□□□□□ -0.78
SHMT2-211ENST00000554310 DDB2Q92466 427 aa10.2□□□□□ -0.78
SHMT2-211ENST00000554310 ARPC1AQ92747 370 aa10.2□□□□□ -0.78
SHMT2-211ENST00000554310 WDR89Q96FK6 387 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-211ENST00000554310 RAX2Q96IS3 184 aa10.2□□□□□ -0.78
SHMT2-211ENST00000554310 UBE2E2Q96LR5 201 aa10.2□□□□□ -0.78
SHMT2-211ENST00000554310 ZNF2Q9BSG1 426 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-211ENST00000554310 MCRIP2Q9BUT9 160 aaKnown RBP10.2□□□□□ -0.78
SHMT2-211ENST00000554310 C14orf166Q9Y224 244 aaKnown RBP10.2□□□□□ -0.78
SHMT2-211ENST00000554310 FOXA2Q9Y261 457 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-211ENST00000554310 FBXO7Q9Y3I1 522 aa10.2□□□□□ -0.78
SHMT2-211ENST00000554310 L7N2F9 121 aa10.19□□□□□ -0.78
SHMT2-211ENST00000554310 CCL24O00175 119 aa10.19□□□□□ -0.78
SHMT2-211ENST00000554310 TUSC2O75896 110 aa10.19□□□□□ -0.78
SHMT2-211ENST00000554310 IGLV2-23P01705 113 aa10.19□□□□□ -0.78
SHMT2-211ENST00000554310 CXCL2P19875 107 aa10.19□□□□□ -0.78
SHMT2-211ENST00000554310 TMEM267Q0VDI3 215 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-211ENST00000554310 KCTD9Q7L273 389 aa10.19□□□□□ -0.78
SHMT2-211ENST00000554310 PPP1R27Q86WC6 154 aa10.19□□□□□ -0.78
SHMT2-211ENST00000554310 BVESQ8NE79 360 aa10.19□□□□□ -0.78
SHMT2-211ENST00000554310 COQ8AQ8NI60 647 aa10.19□□□□□ -0.78
SHMT2-211ENST00000554310 CASTOR1Q8WTX7 329 aa10.19□□□□□ -0.78
SHMT2-211ENST00000554310 TPSG1Q9NRR2 321 aa10.19□□□□□ -0.78
SHMT2-211ENST00000554310 DNAH3Q8TD57 4116 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 TRAV14DV4A0A0A6YYC5 116 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 A0A1W2PN81 502 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 LINC00473A8K010 186 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 FCN1O00602 326 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 SHOXO15266 292 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 TSC22D2O75157 780 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 SLC25A4P12235 298 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 PGAM2P15259 253 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 RPA2P15927 270 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 CHRNA7P36544 502 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 UCP3P55916 312 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 SUPT4H1P63272 117 aaKnown RBP10.18□□□□□ -0.78
SHMT2-211ENST00000554310 RUNX1Q01196 453 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 FHL3Q13643 280 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 OPCMLQ14982 345 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 MSMO1Q15800 293 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 DEFB136Q30KP8 78 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 VMA21Q3ZAQ7 101 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 AKIRIN2Q53H80 203 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 TEX261Q6UWH6 196 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 SLC7A5P1Q8MH63 180 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 OSR1Q8TAX0 266 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-211ENST00000554310 DPF1Q92782 380 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 CLCC1Q96S66 551 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 HSD17B10Q99714 261 aaKnown RBP10.18□□□□□ -0.78
SHMT2-211ENST00000554310 KLK15Q9H2R5 256 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 COMMD9Q9P000 198 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 PRELID3BQ9Y3B1 194 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 U3KQ87 197 aa10.18□□□□□ -0.78
SHMT2-211ENST00000554310 TNCP24821 2201 aa10.17□□□□□ -0.78
SHMT2-211ENST00000554310 IGKV1D-13A0A0B4J2D9 117 aa10.17□□□□□ -0.78
SHMT2-211ENST00000554310 SOX15O60248 233 aa10.17□□□□□ -0.78
SHMT2-211ENST00000554310 CRYZL1O95825 349 aa10.17□□□□□ -0.78
SHMT2-211ENST00000554310 IGLV2-14P01704 120 aa10.17□□□□□ -0.78
SHMT2-211ENST00000554310 CRYGBP07316 175 aa10.17□□□□□ -0.78
SHMT2-211ENST00000554310 IGKV1-13P0DP09 117 aa10.17□□□□□ -0.78
SHMT2-211ENST00000554310 EGR2P11161 476 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-211ENST00000554310 S100A1P23297 94 aa10.17□□□□□ -0.78
SHMT2-211ENST00000554310 RAB9AP51151 201 aa10.17□□□□□ -0.78
SHMT2-211ENST00000554310 UBE2KP61086 200 aa10.17□□□□□ -0.78
SHMT2-211ENST00000554310 CYCSP99999 105 aaKnown RBP10.17□□□□□ -0.78
SHMT2-211ENST00000554310 UNQ5815/PRO19632Q6UWF5 114 aa10.17□□□□□ -0.78
SHMT2-211ENST00000554310 GSG1LQ6UXU4 331 aa10.17□□□□□ -0.78
SHMT2-211ENST00000554310 ZNF491Q8N8L2 437 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms