RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 MRPL41Q8IXM3 137 aaKnown RBP8.73□□□□□ -1.01
PABPN1-203ENST00000553960 PIP4P2Q8N4L2 257 aa8.73□□□□□ -1.01
PABPN1-203ENST00000553960 DTD1Q8TEA8 209 aa8.73□□□□□ -1.01
PABPN1-203ENST00000553960 PLSCR3Q9NRY6 295 aa8.73□□□□□ -1.01
PABPN1-203ENST00000553960 HIF1ANQ9NWT6 349 aa8.73□□□□□ -1.01
PABPN1-203ENST00000553960 C1RLQ9NZP8 487 aa8.73□□□□□ -1.01
PABPN1-203ENST00000553960 LSM5Q9Y4Y9 91 aaKnown RBP8.73□□□□□ -1.01
PABPN1-203ENST00000553960 ITPR3Q14573 2671 aa8.73□□□□□ -1.01
PABPN1-203ENST00000553960 A0A1W2PN81 502 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 PMS2P5A8MQ11 134 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 H7C2Y5 167 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 RRHO14718 337 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 DFFBO76075 338 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 IFNA7P01567 189 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 SNRNP70P08621 437 aaKnown RBP8.72□□□□□ -1.01
PABPN1-203ENST00000553960 FAM106CPP0CH98 169 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 MDKP21741 143 aaPredicted RBP8.72□□□□□ -1.01
PABPN1-203ENST00000553960 CHRNA7P36544 502 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 VAMP2P63027 116 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 HBG1P69891 147 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 HBG2P69892 147 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 EWSR1Q01844 656 aaKnown RBP eCLIP8.72□□□□□ -1.01
PABPN1-203ENST00000553960 ZNF266Q14584 549 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 C2orf83Q53S99 150 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 OR2B11Q5JQS5 317 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 EIF5AL1Q6IS14 154 aaKnown RBP8.72□□□□□ -1.01
PABPN1-203ENST00000553960 C16orf82Q7Z2V1 217 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 CENPVQ7Z7K6 275 aaPredicted RBP8.72□□□□□ -1.01
PABPN1-203ENST00000553960 PPP1R27Q86WC6 154 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 STX12Q86Y82 276 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 ZNF680Q8NEM1 530 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 LRRC20Q8TCA0 184 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 PINX1Q96BK5 328 aaKnown RBP8.72□□□□□ -1.01
PABPN1-203ENST00000553960 EAF1Q96JC9 268 aaPredicted RBP8.72□□□□□ -1.01
PABPN1-203ENST00000553960 RBKSQ9H477 322 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 C7orf69Q9H7B7 122 aa8.72□□□□□ -1.01
PABPN1-203ENST00000553960 TEX50A0A1B0GTY4 177 aa8.71□□□□□ -1.02
PABPN1-203ENST00000553960 PRSS46E5RG02 174 aa8.71□□□□□ -1.02
PABPN1-203ENST00000553960 NBR2O15453 112 aa8.71□□□□□ -1.02
PABPN1-203ENST00000553960 FGF16O43320 207 aa8.71□□□□□ -1.02
PABPN1-203ENST00000553960 SSSCA1O60232 199 aa8.71□□□□□ -1.02
PABPN1-203ENST00000553960 BRI3O95415 125 aa8.71□□□□□ -1.02
PABPN1-203ENST00000553960 TPT1P13693 172 aaKnown RBP8.71□□□□□ -1.02
PABPN1-203ENST00000553960 HTR2BP41595 481 aa8.71□□□□□ -1.02
PABPN1-203ENST00000553960 REG1BP48304 166 aa8.71□□□□□ -1.02
PABPN1-203ENST00000553960 OR2B8PP59922 312 aa8.71□□□□□ -1.02
PABPN1-203ENST00000553960 KLRD1Q13241 179 aa8.71□□□□□ -1.02
PABPN1-203ENST00000553960 IZUMO4Q1ZYL8 232 aa8.71□□□□□ -1.02
PABPN1-203ENST00000553960 CYB5R2Q6BCY4 276 aa8.71□□□□□ -1.02
PABPN1-203ENST00000553960 LHFPL4Q7Z7J7 247 aa8.71□□□□□ -1.02
PABPN1-203ENST00000553960 MOB3BQ86TA1 216 aa8.71□□□□□ -1.02
PABPN1-203ENST00000553960 BAP18Q8IXM2 172 aa8.71□□□□□ -1.02
PABPN1-203ENST00000553960 QTRT1Q9BXR0 403 aaKnown RBP8.71□□□□□ -1.02
PABPN1-203ENST00000553960 COMMD5Q9GZQ3 224 aa8.71□□□□□ -1.02
PABPN1-203ENST00000553960 TMEM160Q9NX00 188 aa8.71□□□□□ -1.02
PABPN1-203ENST00000553960 PSENENQ9NZ42 101 aa8.71□□□□□ -1.02
PABPN1-203ENST00000553960 BOLA1Q9Y3E2 137 aa8.71□□□□□ -1.02
PABPN1-203ENST00000553960 STRAPQ9Y3F4 350 aaKnown RBP8.71□□□□□ -1.02
PABPN1-203ENST00000553960 MAP1AP78559 2803 aaPredicted RBP8.71□□□□□ -1.02
PABPN1-203ENST00000553960 TRAV3A0A0B4J244 114 aa8.7□□□□□ -1.02
PABPN1-203ENST00000553960 IGSF23A1L1A6 192 aa8.7□□□□□ -1.02
PABPN1-203ENST00000553960 C15orf62A8K5M9 175 aa8.7□□□□□ -1.02
PABPN1-203ENST00000553960 HLA-DRB1P01911 266 aa8.7□□□□□ -1.02
PABPN1-203ENST00000553960 SEC11BP0C7V7 166 aa8.7□□□□□ -1.02
PABPN1-203ENST00000553960 CRIP2P52943 208 aaPredicted RBP8.7□□□□□ -1.02
PABPN1-203ENST00000553960 C5orf64Q2M2E5 130 aa8.7□□□□□ -1.02
PABPN1-203ENST00000553960 KLF17Q5JT82 389 aaPredicted RBP8.7□□□□□ -1.02
PABPN1-203ENST00000553960 ZNF562Q6V9R5 426 aa8.7□□□□□ -1.02
PABPN1-203ENST00000553960 DYNAPQ8N1N2 210 aa8.7□□□□□ -1.02
PABPN1-203ENST00000553960 OR1L6Q8NGR2 347 aa8.7□□□□□ -1.02
PABPN1-203ENST00000553960 SCARB1Q8WTV0 552 aa8.7□□□□□ -1.02
PABPN1-203ENST00000553960 CACNG8Q8WXS5 425 aa8.7□□□□□ -1.02
PABPN1-203ENST00000553960 ST8SIA2Q92186 375 aa8.7□□□□□ -1.02
PABPN1-203ENST00000553960 TMEM68Q96MH6 324 aa8.7□□□□□ -1.02
PABPN1-203ENST00000553960 CLCC1Q96S66 551 aa8.7□□□□□ -1.02
PABPN1-203ENST00000553960 GINS3Q9BRX5 216 aa8.7□□□□□ -1.02
PABPN1-203ENST00000553960 ZNF430Q9H8G1 570 aaPredicted RBP8.7□□□□□ -1.02
PABPN1-203ENST00000553960 MED9Q9NWA0 146 aa8.7□□□□□ -1.02
PABPN1-203ENST00000553960 OR51B2Q9Y5P1 312 aa8.7□□□□□ -1.02
PABPN1-203ENST00000553960 BORCS7-ASMTA0A0B4J1R7 106 aa8.69□□□□□ -1.02
PABPN1-203ENST00000553960 CGB1A6NKQ9 187 aa8.69□□□□□ -1.02
PABPN1-203ENST00000553960 RNF223E7ERA6 249 aa8.69□□□□□ -1.02
PABPN1-203ENST00000553960 M0QZK8 103 aa8.69□□□□□ -1.02
PABPN1-203ENST00000553960 MPDU1O75352 247 aa8.69□□□□□ -1.02
PABPN1-203ENST00000553960 SCGB1D2O95969 90 aa8.69□□□□□ -1.02
PABPN1-203ENST00000553960 IFNA17P01571 189 aa8.69□□□□□ -1.02
PABPN1-203ENST00000553960 FBP1P09467 338 aa8.69□□□□□ -1.02
PABPN1-203ENST00000553960 DLK1P80370 383 aa8.69□□□□□ -1.02
PABPN1-203ENST00000553960 SSBP2P81877 361 aaPredicted RBP8.69□□□□□ -1.02
PABPN1-203ENST00000553960 SSX2Q16385 188 aa8.69□□□□□ -1.02
PABPN1-203ENST00000553960 NDUFA5Q16718 116 aa8.69□□□□□ -1.02
PABPN1-203ENST00000553960 VKORC1L1Q8N0U8 176 aa8.69□□□□□ -1.02
PABPN1-203ENST00000553960 PIFOQ8TCI5 191 aa8.69□□□□□ -1.02
PABPN1-203ENST00000553960 RNASEH2CQ8TDP1 164 aaKnown RBP8.69□□□□□ -1.02
PABPN1-203ENST00000553960 Q96MF0 132 aa8.69□□□□□ -1.02
PABPN1-203ENST00000553960 MAGT1Q9H0U3 335 aa8.69□□□□□ -1.02
PABPN1-203ENST00000553960 FBXL17Q9UF56 701 aa8.69□□□□□ -1.02
PABPN1-203ENST00000553960 TIMM9Q9Y5J7 89 aa8.69□□□□□ -1.02
PABPN1-203ENST00000553960 HECTD1Q9ULT8 2610 aa8.69□□□□□ -1.02
PABPN1-203ENST00000553960 ZANQ9Y493 2812 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms