RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 A6NJY4 79 aa11.99□□□□□ -0.49
ACTN1-211ENST00000553882 HIST1H1BP16401 226 aaKnown RBP11.99□□□□□ -0.49
ACTN1-211ENST00000553882 GLRXP35754 106 aa11.99□□□□□ -0.49
ACTN1-211ENST00000553882 CFHR2P36980 270 aa11.99□□□□□ -0.49
ACTN1-211ENST00000553882 CR1LQ2VPA4 569 aa11.99□□□□□ -0.49
ACTN1-211ENST00000553882 TIMM23BQ5SRD1 257 aa11.99□□□□□ -0.49
ACTN1-211ENST00000553882 FAM78BQ5VT40 261 aa11.99□□□□□ -0.49
ACTN1-211ENST00000553882 OR4A47Q6IF82 309 aa11.99□□□□□ -0.49
ACTN1-211ENST00000553882 TMEM183AQ8IXX5 376 aa11.99□□□□□ -0.49
ACTN1-211ENST00000553882 DDB2Q92466 427 aa11.99□□□□□ -0.49
ACTN1-211ENST00000553882 ANAPC16Q96DE5 110 aa11.99□□□□□ -0.49
ACTN1-211ENST00000553882 RBFOX2O43251 390 aaKnown RBP eCLIP11.99□□□□□ -0.491e-5■■■■□ 19.7
ACTN1-211ENST00000553882 PDE6DO43924 150 aa11.99□□□□□ -0.49
ACTN1-211ENST00000553882 LHBP01229 141 aa11.99□□□□□ -0.49
ACTN1-211ENST00000553882 OPRK1P41145 380 aa11.99□□□□□ -0.49
ACTN1-211ENST00000553882 ARSJQ5FYB0 599 aaPredicted RBP11.99□□□□□ -0.49
ACTN1-211ENST00000553882 C1orf174Q8IYL3 243 aa11.99□□□□□ -0.49
ACTN1-211ENST00000553882 C1orf159Q96HA4 380 aa11.99□□□□□ -0.49
ACTN1-211ENST00000553882 TRBV20OR9-2A0A075B6H5 130 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 FAM90A9PA6NNJ1 464 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 MPDU1O75352 247 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 VENTXO95231 258 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 SPATA31B1PQ5VZV4 182 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 ZNF600Q6ZNG1 722 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 FAM216BQ8N7L0 139 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 OR52E5Q8NH55 327 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 FAM122AQ96E09 287 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 SEPSECSQ9HD40 501 aaKnown RBP11.98□□□□□ -0.49
ACTN1-211ENST00000553882 GCM1Q9NP62 436 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 A0A0U1RQK1 487 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 KBTBD11-OT1A0A1B0GTJ5 212 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 SCO2A0A1W2PP80 73 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 ZNF729A6NN14 1252 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-211ENST00000553882 C15orf61A6NNL5 157 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 MMP23AO75900 390 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 FAM27E3Q08E93 113 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 TMEM95Q3KNT9 176 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 FAM169BQ8N8A8 192 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 OR1P1Q8NH06 330 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 RAB1CQ92928 201 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 CCL13Q99616 98 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 PRO1933Q9H354 126 aa11.98□□□□□ -0.49
ACTN1-211ENST00000553882 AMBPP02760 352 aa11.97□□□□□ -0.49
ACTN1-211ENST00000553882 CGB3P0DN86 165 aa11.97□□□□□ -0.49
ACTN1-211ENST00000553882 CGB7P0DN87 165 aa11.97□□□□□ -0.49
ACTN1-211ENST00000553882 MRPS11P82912 194 aaKnown RBP11.97□□□□□ -0.49
ACTN1-211ENST00000553882 SLC24A4Q8NFF2 622 aa11.97□□□□□ -0.49
ACTN1-211ENST00000553882 KCNIP2Q9NS61 270 aa11.97□□□□□ -0.49
ACTN1-211ENST00000553882 TANC2Q9HCD6 1990 aa11.97□□□□□ -0.49
ACTN1-211ENST00000553882 TRGV10A0A0A0MS01 117 aa11.97□□□□□ -0.49
ACTN1-211ENST00000553882 K7EM74 188 aa11.97□□□□□ -0.49
ACTN1-211ENST00000553882 CA2P00918 260 aa11.97□□□□□ -0.49
ACTN1-211ENST00000553882 STAG3L2P0CL84 134 aa11.97□□□□□ -0.49
ACTN1-211ENST00000553882 STAG3L3P0CL85 134 aa11.97□□□□□ -0.49
ACTN1-211ENST00000553882 NPY1RP25929 384 aa11.97□□□□□ -0.49
ACTN1-211ENST00000553882 RAB7AP51149 207 aa11.97□□□□□ -0.49
ACTN1-211ENST00000553882 TNFAIP6P98066 277 aaPredicted RBP11.97□□□□□ -0.49
ACTN1-211ENST00000553882 TCF23Q7RTU1 214 aa11.97□□□□□ -0.49
ACTN1-211ENST00000553882 NPVFQ9HCQ7 196 aa11.97□□□□□ -0.49
ACTN1-211ENST00000553882 RAI1Q7Z5J4 1906 aaPredicted RBP11.96□□□□□ -0.49
ACTN1-211ENST00000553882 GGCTO75223 188 aaKnown RBP11.96□□□□□ -0.49
ACTN1-211ENST00000553882 IGKV1-16P04430 117 aa11.96□□□□□ -0.49
ACTN1-211ENST00000553882 IL6RP08887 468 aaPredicted RBP11.96□□□□□ -0.49
ACTN1-211ENST00000553882 STPG3Q8N7X2 389 aa11.96□□□□□ -0.49
ACTN1-211ENST00000553882 RNF7Q9UBF6 113 aa11.96□□□□□ -0.49
ACTN1-211ENST00000553882 LSM4Q9Y4Z0 139 aaKnown RBP11.96□□□□□ -0.49
ACTN1-211ENST00000553882 YTHDF2Q9Y5A9 579 aaKnown RBP11.96□□□□□ -0.49
ACTN1-211ENST00000553882 FOXH1O75593 365 aa11.96□□□□□ -0.5
ACTN1-211ENST00000553882 IGHV1-46P01743 117 aa11.96□□□□□ -0.5
ACTN1-211ENST00000553882 IL3RAP26951 378 aa11.96□□□□□ -0.5
ACTN1-211ENST00000553882 NUBP1P53384 320 aa11.96□□□□□ -0.5
ACTN1-211ENST00000553882 TMPRSS3P57727 454 aa11.96□□□□□ -0.5
ACTN1-211ENST00000553882 KCNIP4Q6PIL6 250 aa11.96□□□□□ -0.5
ACTN1-211ENST00000553882 MOB3BQ86TA1 216 aa11.96□□□□□ -0.5
ACTN1-211ENST00000553882 ENY2Q9NPA8 101 aa11.96□□□□□ -0.5
ACTN1-211ENST00000553882 ZGRF1Q86YA3 2104 aa11.95□□□□□ -0.5
ACTN1-211ENST00000553882 IGLV3-9A0A075B6K5 115 aa11.95□□□□□ -0.5
ACTN1-211ENST00000553882 ACTL6BO94805 426 aa11.95□□□□□ -0.5
ACTN1-211ENST00000553882 CXorf1O96002 111 aa11.95□□□□□ -0.5
ACTN1-211ENST00000553882 KIR2DS2P43631 304 aa11.95□□□□□ -0.5
ACTN1-211ENST00000553882 EFNB3Q15768 340 aa11.95□□□□□ -0.5
ACTN1-211ENST00000553882 ACTL10Q5JWF8 245 aa11.95□□□□□ -0.5
ACTN1-211ENST00000553882 TEPPQ6URK8 271 aa11.95□□□□□ -0.5
ACTN1-211ENST00000553882 ZCCHC24Q8N2G6 241 aaKnown RBP11.95□□□□□ -0.5
ACTN1-211ENST00000553882 RND1Q92730 232 aa11.95□□□□□ -0.5
ACTN1-211ENST00000553882 WFIKKN1Q96NZ8 548 aa11.95□□□□□ -0.5
ACTN1-211ENST00000553882 TMEM14BQ9NUH8 114 aa11.95□□□□□ -0.5
ACTN1-211ENST00000553882 IDI2-AS1Q9NZ38 188 aa11.95□□□□□ -0.5
ACTN1-211ENST00000553882 TACC2O95359 2948 aa11.95□□□□□ -0.5
ACTN1-211ENST00000553882 RELNP78509 3460 aa11.95□□□□□ -0.5
ACTN1-211ENST00000553882 TRGV8A0A0C4DH27 118 aa11.95□□□□□ -0.5
ACTN1-211ENST00000553882 ZNF320A2RRD8 509 aa11.95□□□□□ -0.5
ACTN1-211ENST00000553882 CEACAM4O75871 244 aa11.95□□□□□ -0.5
ACTN1-211ENST00000553882 IGFBP2P18065 325 aa11.95□□□□□ -0.5
ACTN1-211ENST00000553882 SRP14P37108 136 aaKnown RBP11.95□□□□□ -0.5
ACTN1-211ENST00000553882 HSPE1P61604 102 aaKnown RBP11.95□□□□□ -0.5
ACTN1-211ENST00000553882 CCL8P80075 99 aa11.95□□□□□ -0.5
ACTN1-211ENST00000553882 CFAP161Q6P656 301 aa11.95□□□□□ -0.5
ACTN1-211ENST00000553882 ZCCHC14Q8WYQ9 949 aaKnown RBP11.95□□□□□ -0.5
ACTN1-211ENST00000553882 DYSFO75923 2080 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms