RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 LYZL4Q96KX0 146 aa12.96□□□□□ -0.34
ARHGEF40-202ENST00000553709 GRIFINA4D1Z8 144 aa12.96□□□□□ -0.34
ARHGEF40-202ENST00000553709 IGHV3-48P01763 117 aa12.96□□□□□ -0.34
ARHGEF40-202ENST00000553709 CLEC2AQ6UVW9 174 aa12.96□□□□□ -0.34
ARHGEF40-202ENST00000553709 MUC15Q8N387 334 aa12.96□□□□□ -0.34
ARHGEF40-202ENST00000553709 SRSF12Q8WXF0 261 aaKnown RBP12.96□□□□□ -0.34
ARHGEF40-202ENST00000553709 UQCR10Q9UDW1 63 aa12.96□□□□□ -0.34
ARHGEF40-202ENST00000553709 RALYQ9UKM9 306 aaKnown RBP12.96□□□□□ -0.34
ARHGEF40-202ENST00000553709 H3BTX0 84 aa12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 CA7P43166 264 aa12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 TCTAP57738 103 aa12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 ATRAIDQ6UW56 229 aa12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 DYNLRB2Q8TF09 96 aa12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 COL25A1Q9BXS0 654 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 ELOVL5Q9NYP7 299 aa12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 PLXNA4Q9HCM2 1894 aa12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 A0A1W2PS18 150 aa12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 CYP2G1PQ6ZSU1 146 aa12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 PAQR4Q8N4S7 273 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 FAM89BQ8N5H3 189 aa12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 SGK494Q96LW2 274 aa12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 A0A1B0GV90 55 aa12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 TFF3Q07654 80 aa12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 PF4V1P10720 104 aa12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 BTF3P20290 206 aaKnown RBP12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 MPZP25189 248 aa12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 RPS20P60866 119 aaKnown RBP12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 ZNF738Q8NE65 137 aa12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 OSR1Q8TAX0 266 aaPredicted RBP12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 ZCCHC14Q8WYQ9 949 aaKnown RBP12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 WBP1Q96G27 269 aa12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 C18orf12Q96KH6 178 aa12.95□□□□□ -0.34
ARHGEF40-202ENST00000553709 LIPFP07098 398 aa12.94□□□□□ -0.34
ARHGEF40-202ENST00000553709 MST1P26927 711 aa12.94□□□□□ -0.34
ARHGEF40-202ENST00000553709 TMEM183AQ8IXX5 376 aa12.94□□□□□ -0.34
ARHGEF40-202ENST00000553709 ABCA7Q8IZY2 2146 aa12.94□□□□□ -0.34
ARHGEF40-202ENST00000553709 TRBV6-7A0A0A0MS04 114 aa12.94□□□□□ -0.34
ARHGEF40-202ENST00000553709 HINT1P49773 126 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF40-202ENST00000553709 WFIKKN1Q96NZ8 548 aa12.94□□□□□ -0.34
ARHGEF40-202ENST00000553709 PNKDQ8N490 385 aa12.94□□□□□ -0.34
ARHGEF40-202ENST00000553709 ZNF319Q9P2F9 582 aa12.94□□□□□ -0.34
ARHGEF40-202ENST00000553709 IGHV2OR16-5A0A0B4J2B6 119 aa12.94□□□□□ -0.34
ARHGEF40-202ENST00000553709 B9A039 149 aa12.94□□□□□ -0.34
ARHGEF40-202ENST00000553709 ZNF207O43670 478 aaKnown RBP12.94□□□□□ -0.34
ARHGEF40-202ENST00000553709 MOSP00540 346 aa12.94□□□□□ -0.34
ARHGEF40-202ENST00000553709 PEAR1Q5VY43 1037 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF40-202ENST00000553709 LINC00469Q8N7U9 141 aa12.94□□□□□ -0.34
ARHGEF40-202ENST00000553709 IGHV1-2P23083 117 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 LCN2P80188 198 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 OR4A47Q6IF82 309 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 ZNF525Q8N782 197 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 OR10S1Q8NGN2 331 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 CLDND2Q8NHS1 167 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 SSBP3Q9BWW4 388 aaPredicted RBP12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 IFI27L2Q9H2X8 130 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 LOC105371242A0A075B767 164 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 CGB1A6NKQ9 187 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 IQCF6A8MYZ5 107 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 FOLR2P14207 255 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 GFRA1P56159 465 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 ACSF3Q4G176 576 aaPredicted RBP12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 LINC00305Q7Z4B0 112 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 TM4SF5O14894 197 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 CBLN1P23435 193 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 LHX2P50458 406 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 TM4SF20Q53R12 229 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 NEU1Q99519 415 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 NPIPB11E5RHQ5 1161 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 TNFSF10P50591 281 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 GOLT1AQ6ZVE7 132 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 PLPPR1Q8TBJ4 325 aa12.93□□□□□ -0.34
ARHGEF40-202ENST00000553709 TCF20Q9UGU0 1960 aaKnown RBP12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 PRR19A6NJB7 356 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 H0YIZ8 118 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 SIAH2O43255 324 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 FAM27E3Q08E93 113 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 EBLN2Q6P2I7 272 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 ASXL3Q9C0F0 2248 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 IGKV1D-13A0A0B4J2D9 117 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 LOC105371267A0A1B0GV96 52 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 K7ERU9 68 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 IGKV1-13P0DP09 117 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 C12orf54Q6X4T0 127 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 DCTN5Q9BTE1 182 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 KBTBD11-OT1A0A1B0GTJ5 212 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 F8VVB4 439 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 F8VWA3 439 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 ANOS1P23352 680 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 FAM201AQ5SY85 155 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 A0A087WWC5 75 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 M0R3E3 92 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 CELA3BP08861 270 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 IGFBP2P18065 325 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 FAM216BQ8N7L0 139 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 WDYHV1Q96HA8 205 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 MAP1LC3AQ9H492 121 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 TMEM106BQ9NUM4 274 aa12.92□□□□□ -0.34
ARHGEF40-202ENST00000553709 A0A0A6YYD4 124 aa12.91□□□□□ -0.34
ARHGEF40-202ENST00000553709 SS18L1O75177 396 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms