RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 PRSS27Q9BQR3 290 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 IGHV2-26A0A0B4J1V2 119 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 TNFP01375 233 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 IGHMP01871 453 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 HLA-HP01893 362 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 IGKV3-11P04433 115 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 KLK1P06870 262 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 OR1D4P47884 311 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 ERVK11-1P61568 191 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 ATP5G2Q06055 141 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 TMEM42Q69YG0 159 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 LCN10Q6JVE6 187 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 OPN5Q6U736 354 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 CBLN3Q6UW01 205 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 ZNF843Q8N446 348 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 SPEM1Q8N4L4 309 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 ZNF740Q8NDX6 193 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 OR6K6Q8NGW6 343 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 OR2T10Q8NGZ9 312 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 RAB37Q96AX2 223 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 COQ2Q96H96 371 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 HCAR1Q9BXC0 346 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 CXXC4Q9H2H0 198 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 HEATR5AQ86XA9 2040 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 THADAQ6YHU6 1953 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 SPAG17Q6Q759 2223 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 LY6G6EA0A0G2JKS1 128 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 LMO7DNF2Z398 122 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 NEURL1O76050 574 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 PPP1R3DO95685 299 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 NGFP01138 241 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 ZNF883P0CG24 379 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 C3AR1Q16581 482 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 ZNF474Q6S9Z5 364 aaPredicted RBP3.38□□□□□ -1.87
RDH11-204ENST00000553578 C16orf82Q7Z2V1 217 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 TEX29Q8N6K0 151 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 LINC01356Q8N9X3 169 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 OR13C6PQ8NH95 151 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 ZNF563Q8TA94 476 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 ZG16BQ96DA0 208 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 RCHY1Q96PM5 261 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 RTBDNQ9BSG5 229 aaPredicted RBP3.38□□□□□ -1.87
RDH11-204ENST00000553578 TECRQ9NZ01 308 aaKnown RBP3.38□□□□□ -1.87
RDH11-204ENST00000553578 TAC3Q9UHF0 121 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 RCL1Q9Y2P8 373 aaKnown RBP3.38□□□□□ -1.87
RDH11-204ENST00000553578 U3KQA8 63 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 ARL2-SNX15V9GYD0 113 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 DOCK7Q96N67 2140 aa3.38□□□□□ -1.87
RDH11-204ENST00000553578 ZFP92A6NM28 416 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 FOXH1O75593 365 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 UPK3AO75631 287 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 ISG15P05161 165 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 CTSEP14091 401 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 EDNRAP25101 427 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 HTR1DP28221 377 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 RPL12P30050 165 aaKnown RBP3.37□□□□□ -1.87
RDH11-204ENST00000553578 PRSS3P35030 304 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 KIR2DS4P43632 304 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 P2RY1P47900 373 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 NPBWR2P48146 333 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 TCTAP57738 103 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 UBE2NP61088 152 aaKnown RBP3.37□□□□□ -1.87
RDH11-204ENST00000553578 RPL27P61353 136 aaKnown RBP3.37□□□□□ -1.87
RDH11-204ENST00000553578 RND3P61587 244 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 PPP1R1AQ13522 171 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 ZNF322Q6U7Q0 402 aaPredicted RBP3.37□□□□□ -1.87
RDH11-204ENST00000553578 DNM1P46Q6ZS02 220 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 OR10AG1Q8NH19 301 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 MBD3L1Q8WWY6 194 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 KRTAP9-2Q9BYQ4 174 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 OR51I1Q9H343 314 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 ZNF581Q9P0T4 197 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 ANXA10Q9UJ72 324 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 DNAH14Q0VDD8 3507 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 DPRXA6NFQ7 191 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 K7EN84 100 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 CD5LO43866 347 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 NUPR1O60356 82 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 PRSS2P07478 247 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 MRPL3P09001 348 aaKnown RBP3.37□□□□□ -1.87
RDH11-204ENST00000553578 SRP19P09132 144 aaKnown RBP3.37□□□□□ -1.87
RDH11-204ENST00000553578 WNT2P09544 360 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 SLC25A6P12236 298 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 CRISP2P16562 243 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 LEPP41159 167 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 EIF3IQ13347 325 aaKnown RBP3.37□□□□□ -1.87
RDH11-204ENST00000553578 CSRP2Q16527 193 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 IZUMO4Q1ZYL8 232 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 ACSF3Q4G176 576 aaPredicted RBP3.37□□□□□ -1.87
RDH11-204ENST00000553578 TTC32Q5I0X7 151 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 ATP1A1-AS1Q5TC04 95 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 ZFAND6Q6FIF0 208 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 ADAMTSL5Q6ZMM2 481 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 Q6ZSR3 168 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 PAQR4Q8N4S7 273 aaPredicted RBP3.37□□□□□ -1.87
RDH11-204ENST00000553578 DEFB125Q8N687 156 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 C3orf56Q8N813 242 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 CDRT4Q8N9R6 151 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 OR51A2Q8NGJ7 313 aa3.37□□□□□ -1.87
RDH11-204ENST00000553578 DDB2Q92466 427 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms