RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 OR4D10Q8NGI6 311 aa14.77□□□□□ -0.05
PTCH1-227ENST00000553256 PHB2Q99623 299 aa14.77□□□□□ -0.05
PTCH1-227ENST00000553256 RANGRFQ9HD47 186 aaPredicted RBP14.77□□□□□ -0.05
PTCH1-227ENST00000553256 TMEM140Q9NV12 185 aa14.77□□□□□ -0.05
PTCH1-227ENST00000553256 ZNF257Q9Y2Q1 563 aa14.77□□□□□ -0.05
PTCH1-227ENST00000553256 IGLC7A0M8Q6 106 aa14.76□□□□□ -0.05
PTCH1-227ENST00000553256 GABARAPH6UMI1 98 aa14.76□□□□□ -0.05
PTCH1-227ENST00000553256 CTDSPLO15194 276 aa14.76□□□□□ -0.05
PTCH1-227ENST00000553256 IGKV1-39P01597 117 aa14.76□□□□□ -0.05
PTCH1-227ENST00000553256 IGKV1D-39P04432 117 aa14.76□□□□□ -0.05
PTCH1-227ENST00000553256 TBPP20226 339 aa14.76□□□□□ -0.05
PTCH1-227ENST00000553256 PTBP1P26599 531 aaKnown RBP eCLIP14.76□□□□□ -0.05
PTCH1-227ENST00000553256 RHOGP84095 191 aa14.76□□□□□ -0.05
PTCH1-227ENST00000553256 RNASE12Q5GAN4 147 aaKnown RBP14.76□□□□□ -0.05
PTCH1-227ENST00000553256 AIFM2Q9BRQ8 373 aa14.76□□□□□ -0.05
PTCH1-227ENST00000553256 C13orf42A0A1B0GVH6 325 aa14.75□□□□□ -0.05
PTCH1-227ENST00000553256 FAM223BA6NKX1 122 aa14.75□□□□□ -0.05
PTCH1-227ENST00000553256 MARCH11A6NNE9 402 aa14.75□□□□□ -0.05
PTCH1-227ENST00000553256 ACTL6BO94805 426 aa14.75□□□□□ -0.05
PTCH1-227ENST00000553256 PSMB6P28072 239 aa14.75□□□□□ -0.05
PTCH1-227ENST00000553256 LPAR6P43657 344 aa14.75□□□□□ -0.05
PTCH1-227ENST00000553256 RND3P61587 244 aa14.75□□□□□ -0.05
PTCH1-227ENST00000553256 ZNF429Q86V71 674 aa14.75□□□□□ -0.05
PTCH1-227ENST00000553256 FAM223AQ8IWN6 122 aa14.75□□□□□ -0.05
PTCH1-227ENST00000553256 CMTM1Q8IZ96 169 aa14.75□□□□□ -0.05
PTCH1-227ENST00000553256 ARRDC1Q8N5I2 433 aa14.75□□□□□ -0.05
PTCH1-227ENST00000553256 TMEM229BQ8NBD8 167 aa14.75□□□□□ -0.05
PTCH1-227ENST00000553256 C15orf40Q8WUR7 153 aa14.75□□□□□ -0.05
PTCH1-227ENST00000553256 SMIM4Q8WVI0 70 aa14.75□□□□□ -0.05
PTCH1-227ENST00000553256 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.74□□□□□ -0.05
PTCH1-227ENST00000553256 TSPAN5P62079 268 aa14.74□□□□□ -0.05
PTCH1-227ENST00000553256 SSBP1Q04837 148 aaKnown RBP14.74□□□□□ -0.05
PTCH1-227ENST00000553256 PHLDA2Q53GA4 152 aa14.74□□□□□ -0.05
PTCH1-227ENST00000553256 LPCAT3Q6P1A2 487 aa14.74□□□□□ -0.05
PTCH1-227ENST00000553256 TBC1D26Q86UD7 250 aa14.74□□□□□ -0.05
PTCH1-227ENST00000553256 SLC38A6Q8IZM9 456 aa14.74□□□□□ -0.05
PTCH1-227ENST00000553256 NECAP1Q8NC96 275 aa14.74□□□□□ -0.05
PTCH1-227ENST00000553256 FYTTD1Q96QD9 318 aaKnown RBP14.74□□□□□ -0.05
PTCH1-227ENST00000553256 PEF1Q9UBV8 284 aaKnown RBP14.74□□□□□ -0.05
PTCH1-227ENST00000553256 SORL1Q92673 2214 aa14.74□□□□□ -0.05
PTCH1-227ENST00000553256 IGLV11-55A0A075B6I3 123 aa14.73□□□□□ -0.05
PTCH1-227ENST00000553256 ANKRD34BA5PLL1 514 aa14.73□□□□□ -0.05
PTCH1-227ENST00000553256 DBX1A6NMT0 343 aa14.73□□□□□ -0.05
PTCH1-227ENST00000553256 BMPR1BO00238 502 aa14.73□□□□□ -0.05
PTCH1-227ENST00000553256 MPPED1O15442 326 aa14.73□□□□□ -0.05
PTCH1-227ENST00000553256 MRPS10P82664 201 aaKnown RBP14.73□□□□□ -0.05
PTCH1-227ENST00000553256 SLC25A42Q86VD7 318 aa14.73□□□□□ -0.05
PTCH1-227ENST00000553256 SEC22AQ96IW7 307 aa14.73□□□□□ -0.05
PTCH1-227ENST00000553256 SRSF8Q9BRL6 282 aaKnown RBP14.73□□□□□ -0.05
PTCH1-227ENST00000553256 ZMAT5Q9UDW3 170 aaKnown RBP14.73□□□□□ -0.05
PTCH1-227ENST00000553256 RGS5O15539 181 aa14.72□□□□□ -0.05
PTCH1-227ENST00000553256 OR2J3O76001 311 aa14.72□□□□□ -0.05
PTCH1-227ENST00000553256 P0C879 139 aa14.72□□□□□ -0.05
PTCH1-227ENST00000553256 ZP3P21754 424 aa14.72□□□□□ -0.05
PTCH1-227ENST00000553256 RNASE10Q5GAN6 216 aaKnown RBP14.72□□□□□ -0.05
PTCH1-227ENST00000553256 PRR25Q96S07 402 aa14.72□□□□□ -0.05
PTCH1-227ENST00000553256 HRASLSQ9HDD0 168 aa14.72□□□□□ -0.05
PTCH1-227ENST00000553256 NDUFA4L2Q9NRX3 87 aa14.72□□□□□ -0.05
PTCH1-227ENST00000553256 TEX50A0A1B0GTY4 177 aa14.71□□□□□ -0.05
PTCH1-227ENST00000553256 GSTZ1O43708 216 aaPredicted RBP14.71□□□□□ -0.05
PTCH1-227ENST00000553256 NDUFB8O95169 186 aa14.71□□□□□ -0.05
PTCH1-227ENST00000553256 KRASP01116 189 aa14.71□□□□□ -0.05
PTCH1-227ENST00000553256 IGLV1-51P01701 117 aa14.71□□□□□ -0.05
PTCH1-227ENST00000553256 RPA2P15927 270 aa14.71□□□□□ -0.05
PTCH1-227ENST00000553256 G6PCP35575 357 aa14.71□□□□□ -0.05
PTCH1-227ENST00000553256 ECI1P42126 302 aa14.71□□□□□ -0.05
PTCH1-227ENST00000553256 MECP2P51608 486 aaKnown RBP14.71□□□□□ -0.05
PTCH1-227ENST00000553256 TAS2R19P59542 299 aa14.71□□□□□ -0.05
PTCH1-227ENST00000553256 WT1-ASQ06250 92 aa14.71□□□□□ -0.05
PTCH1-227ENST00000553256 EXOSC2Q13868 293 aaKnown RBP14.71□□□□□ -0.05
PTCH1-227ENST00000553256 C15orf32Q32M92 178 aa14.71□□□□□ -0.05
PTCH1-227ENST00000553256 TERB2Q8NHR7 220 aa14.71□□□□□ -0.05
PTCH1-227ENST00000553256 ZNF486Q96H40 463 aaPredicted RBP14.71□□□□□ -0.05
PTCH1-227ENST00000553256 DIRAS2Q96HU8 199 aa14.71□□□□□ -0.05
PTCH1-227ENST00000553256 CCDC140Q96MF4 163 aa14.71□□□□□ -0.05
PTCH1-227ENST00000553256 ZNF256Q9Y2P7 627 aaPredicted RBP14.71□□□□□ -0.05
PTCH1-227ENST00000553256 PI3P19957 117 aa14.7□□□□□ -0.06
PTCH1-227ENST00000553256 TNFSF8P32971 234 aa14.7□□□□□ -0.06
PTCH1-227ENST00000553256 ATP5G2Q06055 141 aa14.7□□□□□ -0.06
PTCH1-227ENST00000553256 STEAP1BQ6NZ63 245 aa14.7□□□□□ -0.06
PTCH1-227ENST00000553256 ADAMTSL5Q6ZMM2 481 aa14.7□□□□□ -0.06
PTCH1-227ENST00000553256 DMBX1Q8NFW5 382 aa14.7□□□□□ -0.06
PTCH1-227ENST00000553256 OR10W1Q8NGF6 305 aa14.7□□□□□ -0.06
PTCH1-227ENST00000553256 TMEM14BQ9NUH8 114 aa14.7□□□□□ -0.06
PTCH1-227ENST00000553256 RABL2AQ9UBK7 228 aaPredicted RBP14.7□□□□□ -0.06
PTCH1-227ENST00000553256 RABL2BQ9UNT1 228 aa14.7□□□□□ -0.06
PTCH1-227ENST00000553256 SAP30O75446 220 aa14.69□□□□□ -0.06
PTCH1-227ENST00000553256 REG1AP05451 166 aa14.69□□□□□ -0.06
PTCH1-227ENST00000553256 FAAP20Q6NZ36 180 aa14.69□□□□□ -0.06
PTCH1-227ENST00000553256 OR9G4Q8NGQ1 327 aa14.69□□□□□ -0.06
PTCH1-227ENST00000553256 B9D2Q9BPU9 175 aa14.69□□□□□ -0.06
PTCH1-227ENST00000553256 QTRT1Q9BXR0 403 aaKnown RBP14.69□□□□□ -0.06
PTCH1-227ENST00000553256 SIGLEC8Q9NYZ4 499 aa14.69□□□□□ -0.06
PTCH1-227ENST00000553256 FBXL7Q9UJT9 491 aa14.69□□□□□ -0.06
PTCH1-227ENST00000553256 NSG2Q9Y328 171 aa14.69□□□□□ -0.06
PTCH1-227ENST00000553256 RAB3DO95716 219 aa14.68□□□□□ -0.06
PTCH1-227ENST00000553256 CSN3P07498 182 aa14.68□□□□□ -0.06
PTCH1-227ENST00000553256 SPNP16150 400 aa14.68□□□□□ -0.06
PTCH1-227ENST00000553256 MFAP2P55001 183 aa14.68□□□□□ -0.06
PTCH1-227ENST00000553256 SYNJ2BPP57105 145 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms