RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 AP3S2P59780 193 aa14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 RUNX1Q01196 453 aa14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 DEFA6Q01524 100 aa14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 ZNF616Q08AN1 781 aa14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 OXLD1Q5BKU9 147 aa14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 Q8N402 240 aa14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 OR1N2Q8NGR9 330 aa14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 OR13C8Q8NGS7 320 aa14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 MARCH1Q8TCQ1 289 aa14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 MCUBQ9NWR8 336 aa14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 SCP2D1Q9UJQ7 156 aa14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 V9GYH0 126 aa14.35□□□□□ -0.11
PRPF40B-216ENST00000552301 NOTCH1P46531 2555 aa14.34□□□□□ -0.11
PRPF40B-216ENST00000552301 HMX3A6NHT5 357 aa14.34□□□□□ -0.11
PRPF40B-216ENST00000552301 I3L521 148 aa14.34□□□□□ -0.11
PRPF40B-216ENST00000552301 SNAPC5O75971 98 aa14.34□□□□□ -0.11
PRPF40B-216ENST00000552301 CTSDP07339 412 aaPredicted RBP14.34□□□□□ -0.11
PRPF40B-216ENST00000552301 ZNF735P0CB33 412 aa14.34□□□□□ -0.11
PRPF40B-216ENST00000552301 G6PCP35575 357 aa14.34□□□□□ -0.11
PRPF40B-216ENST00000552301 ZNF585BQ52M93 769 aa14.34□□□□□ -0.11
PRPF40B-216ENST00000552301 CCDC190Q86UF4 302 aa14.34□□□□□ -0.11
PRPF40B-216ENST00000552301 ADAD2Q8NCV1 583 aaKnown RBP14.34□□□□□ -0.11
PRPF40B-216ENST00000552301 CMYA5Q8N3K9 4069 aa14.33□□□□□ -0.11
PRPF40B-216ENST00000552301 H0Y980 276 aa14.33□□□□□ -0.12
PRPF40B-216ENST00000552301 SURF2Q15527 256 aaPredicted RBP14.33□□□□□ -0.12
PRPF40B-216ENST00000552301 TOMM5Q8N4H5 51 aa14.33□□□□□ -0.12
PRPF40B-216ENST00000552301 OR51S1Q8NGJ8 323 aa14.33□□□□□ -0.12
PRPF40B-216ENST00000552301 TSC22D3Q99576 134 aa14.33□□□□□ -0.12
PRPF40B-216ENST00000552301 ALX4Q9H161 411 aaPredicted RBP14.33□□□□□ -0.12
PRPF40B-216ENST00000552301 ZNF257Q9Y2Q1 563 aa14.33□□□□□ -0.12
PRPF40B-216ENST00000552301 TRAV3A0A0B4J244 114 aa14.32□□□□□ -0.12
PRPF40B-216ENST00000552301 TEX22C9J3V5 150 aa14.32□□□□□ -0.12
PRPF40B-216ENST00000552301 BRI3O95415 125 aa14.32□□□□□ -0.12
PRPF40B-216ENST00000552301 DHFRP00374 187 aa14.32□□□□□ -0.12
PRPF40B-216ENST00000552301 IL6RP08887 468 aaPredicted RBP14.32□□□□□ -0.12
PRPF40B-216ENST00000552301 FGF2P09038 288 aa14.32□□□□□ -0.12
PRPF40B-216ENST00000552301 FHL3Q13643 280 aa14.32□□□□□ -0.12
PRPF40B-216ENST00000552301 ZNF79Q15937 498 aa14.32□□□□□ -0.12
PRPF40B-216ENST00000552301 BEAN1Q3B7T3 259 aa14.32□□□□□ -0.12
PRPF40B-216ENST00000552301 TTC9CQ8N5M4 171 aa14.32□□□□□ -0.12
PRPF40B-216ENST00000552301 OR6Q1Q8NGQ2 317 aa14.32□□□□□ -0.12
PRPF40B-216ENST00000552301 USMG5Q96IX5 58 aa14.32□□□□□ -0.12
PRPF40B-216ENST00000552301 SCGB3A2Q96PL1 93 aa14.32□□□□□ -0.12
PRPF40B-216ENST00000552301 TEX13DA0A0J9YY54 714 aaPredicted RBP14.31□□□□□ -0.12
PRPF40B-216ENST00000552301 C3orf85A0A1B0GTC6 90 aa14.31□□□□□ -0.12
PRPF40B-216ENST00000552301 NPIPB5A8MRT5 1133 aa14.31□□□□□ -0.12
PRPF40B-216ENST00000552301 LINC01619G3V211 115 aa14.31□□□□□ -0.12
PRPF40B-216ENST00000552301 ATG12O94817 140 aa14.31□□□□□ -0.12
PRPF40B-216ENST00000552301 MYOD1P15172 320 aa14.31□□□□□ -0.12
PRPF40B-216ENST00000552301 ETV6P41212 452 aa14.31□□□□□ -0.12
PRPF40B-216ENST00000552301 INPP1P49441 399 aa14.31□□□□□ -0.12
PRPF40B-216ENST00000552301 OR2B8PP59922 312 aa14.31□□□□□ -0.12
PRPF40B-216ENST00000552301 RHOGP84095 191 aa14.31□□□□□ -0.12
PRPF40B-216ENST00000552301 TRIM16LQ309B1 348 aa14.31□□□□□ -0.12
PRPF40B-216ENST00000552301 THOC7Q6I9Y2 204 aaKnown RBP14.31□□□□□ -0.12
PRPF40B-216ENST00000552301 H2BFWTQ7Z2G1 175 aa14.31□□□□□ -0.12
PRPF40B-216ENST00000552301 TRIM63Q969Q1 353 aa14.31□□□□□ -0.12
PRPF40B-216ENST00000552301 MRGPRFQ96AM1 343 aa14.31□□□□□ -0.12
PRPF40B-216ENST00000552301 QTRT1Q9BXR0 403 aaKnown RBP14.31□□□□□ -0.12
PRPF40B-216ENST00000552301 SLC2A8Q9NY64 477 aa14.31□□□□□ -0.12
PRPF40B-216ENST00000552301 PRNDQ9UKY0 176 aa14.31□□□□□ -0.12
PRPF40B-216ENST00000552301 MEGF8Q7Z7M0 2845 aa14.3□□□□□ -0.12
PRPF40B-216ENST00000552301 FAM223BA6NKX1 122 aa14.3□□□□□ -0.12
PRPF40B-216ENST00000552301 B3GALNT1O75752 331 aa14.3□□□□□ -0.12
PRPF40B-216ENST00000552301 PRH1P02810 166 aa14.3□□□□□ -0.12
PRPF40B-216ENST00000552301 HSPB1P04792 205 aaKnown RBP14.3□□□□□ -0.12
PRPF40B-216ENST00000552301 AKR1C2P52895 323 aa14.3□□□□□ -0.12
PRPF40B-216ENST00000552301 DEFA5Q01523 94 aa14.3□□□□□ -0.12
PRPF40B-216ENST00000552301 FOXB2Q5VYV0 432 aa14.3□□□□□ -0.12
PRPF40B-216ENST00000552301 FAM223AQ8IWN6 122 aa14.3□□□□□ -0.12
PRPF40B-216ENST00000552301 CADM3Q8N126 398 aa14.3□□□□□ -0.12
PRPF40B-216ENST00000552301 OR1L8Q8NGR8 309 aa14.3□□□□□ -0.12
PRPF40B-216ENST00000552301 SRSF8Q9BRL6 282 aaKnown RBP14.3□□□□□ -0.12
PRPF40B-216ENST00000552301 HINT2Q9BX68 163 aa14.3□□□□□ -0.12
PRPF40B-216ENST00000552301 FKBP11Q9NYL4 201 aa14.3□□□□□ -0.12
PRPF40B-216ENST00000552301 IGHV4OR15-8A0A075B7B6 117 aa14.29□□□□□ -0.12
PRPF40B-216ENST00000552301 A0A087WW49 117 aa14.29□□□□□ -0.12
PRPF40B-216ENST00000552301 E7EUB6 86 aa14.29□□□□□ -0.12
PRPF40B-216ENST00000552301 WIPF1O43516 503 aa14.29□□□□□ -0.12
PRPF40B-216ENST00000552301 RBMXL2O75526 392 aaKnown RBP14.29□□□□□ -0.12
PRPF40B-216ENST00000552301 DEFA4P12838 97 aa14.29□□□□□ -0.12
PRPF40B-216ENST00000552301 AREGP15514 252 aa14.29□□□□□ -0.12
PRPF40B-216ENST00000552301 PSMB6P28072 239 aa14.29□□□□□ -0.12
PRPF40B-216ENST00000552301 ATP5G2Q06055 141 aa14.29□□□□□ -0.12
PRPF40B-216ENST00000552301 KLF9Q13886 244 aaPredicted RBP14.29□□□□□ -0.12
PRPF40B-216ENST00000552301 KPRPQ5T749 579 aaPredicted RBP14.29□□□□□ -0.12
PRPF40B-216ENST00000552301 TRIQKQ629K1 86 aa14.29□□□□□ -0.12
PRPF40B-216ENST00000552301 ZNF57Q68EA5 555 aaPredicted RBP14.29□□□□□ -0.12
PRPF40B-216ENST00000552301 OR4A16Q8NH70 328 aa14.29□□□□□ -0.12
PRPF40B-216ENST00000552301 RNASE11Q8TAA1 199 aaKnown RBP14.29□□□□□ -0.12
PRPF40B-216ENST00000552301 TP53RKQ96S44 253 aa14.29□□□□□ -0.12
PRPF40B-216ENST00000552301 SRRQ9GZT4 340 aa14.29□□□□□ -0.12
PRPF40B-216ENST00000552301 RANGRFQ9HD47 186 aaPredicted RBP14.29□□□□□ -0.12
PRPF40B-216ENST00000552301 NSG2Q9Y328 171 aa14.29□□□□□ -0.12
PRPF40B-216ENST00000552301 OR51B2Q9Y5P1 312 aa14.29□□□□□ -0.12
PRPF40B-216ENST00000552301 A0A1B0GW64 132 aa14.28□□□□□ -0.12
PRPF40B-216ENST00000552301 ANKRD34BA5PLL1 514 aa14.28□□□□□ -0.12
PRPF40B-216ENST00000552301 CYB5BO43169 146 aa14.28□□□□□ -0.12
PRPF40B-216ENST00000552301 OR2J3O76001 311 aa14.28□□□□□ -0.12
PRPF40B-216ENST00000552301 TRAPPC2P0DI81 140 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms