RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 TMEM140Q9NV12 185 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 SLC2A8Q9NY64 477 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 VSIG4Q9Y279 399 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 KCNIP3Q9Y2W7 256 aa8.29□□□□□ -1.08
PTCH1-225ENST00000551845 VWFP04275 2813 aa8.28□□□□□ -1.08
PTCH1-225ENST00000551845 H3BUA1 57 aa8.28□□□□□ -1.08
PTCH1-225ENST00000551845 SOX15O60248 233 aa8.28□□□□□ -1.08
PTCH1-225ENST00000551845 G6PCP35575 357 aa8.28□□□□□ -1.08
PTCH1-225ENST00000551845 RPL27AP46776 148 aaKnown RBP8.28□□□□□ -1.08
PTCH1-225ENST00000551845 BAK1Q16611 211 aa8.28□□□□□ -1.08
PTCH1-225ENST00000551845 C8orf86Q6ZUL3 223 aa8.28□□□□□ -1.08
PTCH1-225ENST00000551845 H2BFWTQ7Z2G1 175 aa8.28□□□□□ -1.08
PTCH1-225ENST00000551845 SLC25A42Q86VD7 318 aa8.28□□□□□ -1.08
PTCH1-225ENST00000551845 TTC9CQ8N5M4 171 aa8.28□□□□□ -1.08
PTCH1-225ENST00000551845 TRIM63Q969Q1 353 aa8.28□□□□□ -1.08
PTCH1-225ENST00000551845 FYTTD1Q96QD9 318 aaKnown RBP8.28□□□□□ -1.08
PTCH1-225ENST00000551845 TSC22D3Q99576 134 aa8.28□□□□□ -1.08
PTCH1-225ENST00000551845 C5orf66Q9H5L9 145 aa8.28□□□□□ -1.08
PTCH1-225ENST00000551845 FKBP11Q9NYL4 201 aa8.28□□□□□ -1.08
PTCH1-225ENST00000551845 TRAV3A0A0B4J244 114 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 A0A0G2JLM5 398 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 NAP1L6A6NFF2 107 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 CENPXA8MT69 81 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 H0Y980 276 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 BRI3O95415 125 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 TRGV3P03979 118 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 FGF2P09038 288 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 OR9G9P0C7N8 305 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 APELAP0DMC3 54 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 TPPP2P59282 170 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 DHODHQ02127 395 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 KIAA0141Q14154 515 aaPredicted RBP8.27□□□□□ -1.09
PTCH1-225ENST00000551845 TRIM16LQ309B1 348 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 SP6Q3SY56 376 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 ASPHD1Q5U4P2 390 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 C18orf65Q6ZTR6 163 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 SGPP2Q8IWX5 399 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 WFDC9Q8NEX5 89 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 CASTOR1Q8WTX7 329 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 MRGPRFQ96AM1 343 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 SLC25A21Q9BQT8 299 aaPredicted RBP8.27□□□□□ -1.09
PTCH1-225ENST00000551845 COA4Q9NYJ1 87 aa8.27□□□□□ -1.09
PTCH1-225ENST00000551845 TEX50A0A1B0GTY4 177 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 HMX3A6NHT5 357 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 E7EUB6 86 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 CCL24O00175 119 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 DHFRP00374 187 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 TRAPPC2P0DI81 140 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 TRAPPC2BP0DI82 140 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 CD33P20138 364 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 C10orf55Q5SWW7 151 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 OR11H1Q8NG94 326 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 OR1L8Q8NGR8 309 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 OR1N2Q8NGR9 330 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 OR4A16Q8NH70 328 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 MYOZ3Q8TDC0 251 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 C4orf3Q8WVX3 66 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 S100ZQ8WXG8 99 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 DPF1Q92782 380 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 SEC22AQ96IW7 307 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 USMG5Q96IX5 58 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 TP53RKQ96S44 253 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 NAA60Q9H7X0 242 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 PRNDQ9UKY0 176 aa8.26□□□□□ -1.09
PTCH1-225ENST00000551845 C13orf42A0A1B0GVH6 325 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 LINC00854A0A1B0GVQ3 168 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 CRYM-AS1A6NIL9 109 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 RBMXL2O75526 392 aaKnown RBP8.25□□□□□ -1.09
PTCH1-225ENST00000551845 CDS2O95674 445 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 IGKV1-39P01597 117 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 IGKV1D-39P04432 117 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 OR5AC1P0C628 307 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 DEFA4P12838 97 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 AKR1C4P17516 323 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 UCP1P25874 307 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 PSMB6P28072 239 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 OR2B8PP59922 312 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 THOC7Q6I9Y2 204 aaKnown RBP8.25□□□□□ -1.09
PTCH1-225ENST00000551845 HSD17B13Q7Z5P4 300 aaPredicted RBP8.25□□□□□ -1.09
PTCH1-225ENST00000551845 MRPL41Q8IXM3 137 aaKnown RBP8.25□□□□□ -1.09
PTCH1-225ENST00000551845 ADAD2Q8NCV1 583 aaKnown RBP8.25□□□□□ -1.09
PTCH1-225ENST00000551845 OR5B3Q8NH48 314 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 GLYATL2Q8WU03 294 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 RRNAD1Q96FB5 475 aaKnown RBP8.25□□□□□ -1.09
PTCH1-225ENST00000551845 OR5B12Q96R08 314 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 P2RX4Q99571 388 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 SDHCQ99643 169 aaPredicted RBP8.25□□□□□ -1.09
PTCH1-225ENST00000551845 C7orf50Q9BRJ6 194 aaKnown RBP8.25□□□□□ -1.09
PTCH1-225ENST00000551845 SRSF8Q9BRL6 282 aaKnown RBP8.25□□□□□ -1.09
PTCH1-225ENST00000551845 TMEM222Q9H0R3 208 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 PTTG2Q9NZH5 202 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 ZNF257Q9Y2Q1 563 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 NSG2Q9Y328 171 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 OR51B2Q9Y5P1 312 aa8.25□□□□□ -1.09
PTCH1-225ENST00000551845 NPIPB5A8MRT5 1133 aa8.24□□□□□ -1.09
PTCH1-225ENST00000551845 TEX22C9J3V5 150 aa8.24□□□□□ -1.09
PTCH1-225ENST00000551845 I3L521 148 aa8.24□□□□□ -1.09
PTCH1-225ENST00000551845 IGHV3-11P01762 117 aa8.24□□□□□ -1.09
PTCH1-225ENST00000551845 CRYGCP07315 174 aa8.24□□□□□ -1.09
PTCH1-225ENST00000551845 ANXA3P12429 323 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms