RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 SEM1Q6ZVN7 128 aa10.76□□□□□ -0.69
CACNB3-219ENST00000551544 LINC01551Q86U37 167 aa10.76□□□□□ -0.69
CACNB3-219ENST00000551544 TCF19Q9Y242 345 aa10.76□□□□□ -0.69
CACNB3-219ENST00000551544 ZFHX4Q86UP3 3567 aa10.76□□□□□ -0.69
CACNB3-219ENST00000551544 PRSS8Q16651 343 aa10.76□□□□□ -0.69
CACNB3-219ENST00000551544 AARDQ4LEZ3 155 aa10.76□□□□□ -0.69
CACNB3-219ENST00000551544 ITLN1Q8WWA0 313 aa10.76□□□□□ -0.69
CACNB3-219ENST00000551544 GGTLC1Q9BX51 225 aa10.76□□□□□ -0.69
CACNB3-219ENST00000551544 ASCL3Q9NQ33 180 aa10.76□□□□□ -0.69
CACNB3-219ENST00000551544 FAM90A9PA6NNJ1 464 aa10.76□□□□□ -0.69
CACNB3-219ENST00000551544 C1QTNF9P0C862 333 aa10.76□□□□□ -0.69
CACNB3-219ENST00000551544 HNF1AP20823 631 aa10.76□□□□□ -0.69
CACNB3-219ENST00000551544 COL8A2P25067 703 aa10.76□□□□□ -0.69
CACNB3-219ENST00000551544 OPRK1P41145 380 aa10.76□□□□□ -0.69
CACNB3-219ENST00000551544 KCNIP4Q6PIL6 250 aa10.76□□□□□ -0.69
CACNB3-219ENST00000551544 DUX4L9Q6RFH8 374 aaPredicted RBP10.76□□□□□ -0.69
CACNB3-219ENST00000551544 ZNF114Q8NC26 417 aa10.76□□□□□ -0.69
CACNB3-219ENST00000551544 HINT2Q9BX68 163 aa10.76□□□□□ -0.69
CACNB3-219ENST00000551544 F2RL2O00254 374 aa10.75□□□□□ -0.69
CACNB3-219ENST00000551544 MPDU1O75352 247 aa10.75□□□□□ -0.69
CACNB3-219ENST00000551544 KLF3P57682 345 aaPredicted RBP10.75□□□□□ -0.69
CACNB3-219ENST00000551544 DEFB108BQ8NET1 73 aa10.75□□□□□ -0.69
CACNB3-219ENST00000551544 OR52E5Q8NH55 327 aa10.75□□□□□ -0.69
CACNB3-219ENST00000551544 RAB1CQ92928 201 aa10.75□□□□□ -0.69
CACNB3-219ENST00000551544 KCNIP2Q9NS61 270 aa10.75□□□□□ -0.69
CACNB3-219ENST00000551544 TET2Q6N021 2002 aaPredicted RBP10.75□□□□□ -0.69
CACNB3-219ENST00000551544 PRSS46E5RG02 174 aa10.75□□□□□ -0.69
CACNB3-219ENST00000551544 RBFOX2O43251 390 aaKnown RBP eCLIP10.75□□□□□ -0.69
CACNB3-219ENST00000551544 ERVFC1-1P60608 527 aa10.75□□□□□ -0.69
CACNB3-219ENST00000551544 CT45A1Q5HYN5 189 aa10.75□□□□□ -0.69
CACNB3-219ENST00000551544 RPRMLQ8N4K4 120 aa10.75□□□□□ -0.69
CACNB3-219ENST00000551544 GBGT1Q8N5D6 347 aa10.75□□□□□ -0.69
CACNB3-219ENST00000551544 OR4S2Q8NH73 311 aa10.75□□□□□ -0.69
CACNB3-219ENST00000551544 CT45A3Q8NHU0 189 aa10.75□□□□□ -0.69
CACNB3-219ENST00000551544 SNHG12Q9BXW3 62 aa10.75□□□□□ -0.69
CACNB3-219ENST00000551544 CNOT1A5YKK6 2376 aaKnown RBP10.75□□□□□ -0.69
CACNB3-219ENST00000551544 SAA2-SAA4A0A096LPE2 208 aa10.74□□□□□ -0.69
CACNB3-219ENST00000551544 OR4A8P0C604 315 aa10.74□□□□□ -0.69
CACNB3-219ENST00000551544 SAA2P0DJI9 122 aaPredicted RBP10.74□□□□□ -0.69
CACNB3-219ENST00000551544 MYOD1P15172 320 aa10.74□□□□□ -0.69
CACNB3-219ENST00000551544 LCN2P80188 198 aa10.74□□□□□ -0.69
CACNB3-219ENST00000551544 CR1LQ2VPA4 569 aa10.74□□□□□ -0.69
CACNB3-219ENST00000551544 MRPL41Q8IXM3 137 aaKnown RBP10.74□□□□□ -0.69
CACNB3-219ENST00000551544 C1orf174Q8IYL3 243 aa10.74□□□□□ -0.69
CACNB3-219ENST00000551544 A0A0U1RQK1 487 aa10.74□□□□□ -0.69
CACNB3-219ENST00000551544 ZNF320A2RRD8 509 aa10.74□□□□□ -0.69
CACNB3-219ENST00000551544 C17orf58Q2M2W7 97 aa10.74□□□□□ -0.69
CACNB3-219ENST00000551544 ZNF474Q6S9Z5 364 aaPredicted RBP10.74□□□□□ -0.69
CACNB3-219ENST00000551544 LYG1Q8N1E2 194 aa10.74□□□□□ -0.69
CACNB3-219ENST00000551544 KIR2DL5BA0A0G2JN68 375 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 KIR2DL5BA0A0G2JPC4 375 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 SCO2A0A1W2PP80 73 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 F6UZH7 168 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 M0R143 59 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 CXorf1O96002 111 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 STAG3L2P0CL84 134 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 STAG3L3P0CL85 134 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 IL3RAP26951 378 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 CFHR2P36980 270 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 GNG10P50151 68 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 CNN1P51911 297 aaKnown RBP10.73□□□□□ -0.69
CACNB3-219ENST00000551544 ARSJQ5FYB0 599 aaPredicted RBP10.73□□□□□ -0.69
CACNB3-219ENST00000551544 C1orf194Q5T5A4 169 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 OR4A47Q6IF82 309 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 KIR2DL5AQ8N109 375 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 DDB2Q92466 427 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 NPVFQ9HCQ7 196 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 BOD1L1Q8NFC6 3051 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 C15orf61A6NNL5 157 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 KIR2DS2P43631 304 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 SPATA31B1PQ5VZV4 182 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 PIP4P1Q86T03 277 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 C1orf159Q96HA4 380 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 BTF3L4Q96K17 158 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 SEPSECSQ9HD40 501 aaKnown RBP10.73□□□□□ -0.69
CACNB3-219ENST00000551544 ENY2Q9NPA8 101 aa10.73□□□□□ -0.69
CACNB3-219ENST00000551544 RP1L1Q8IWN7 2480 aaPredicted RBP10.73□□□□□ -0.69
CACNB3-219ENST00000551544 TRBV20OR9-2A0A075B6H5 130 aa10.72□□□□□ -0.69
CACNB3-219ENST00000551544 MBD3L4A6NDZ8 208 aaPredicted RBP10.72□□□□□ -0.69
CACNB3-219ENST00000551544 MBD3L3A6NE82 208 aaPredicted RBP10.72□□□□□ -0.69
CACNB3-219ENST00000551544 MBD3L5A6NJ08 208 aaPredicted RBP10.72□□□□□ -0.69
CACNB3-219ENST00000551544 TMPRSS2O15393 492 aa10.72□□□□□ -0.69
CACNB3-219ENST00000551544 LHBP01229 141 aa10.72□□□□□ -0.69
CACNB3-219ENST00000551544 IL6RP08887 468 aaPredicted RBP10.72□□□□□ -0.69
CACNB3-219ENST00000551544 NPY1RP25929 384 aa10.72□□□□□ -0.69
CACNB3-219ENST00000551544 RAB7AP51149 207 aa10.72□□□□□ -0.69
CACNB3-219ENST00000551544 TMPRSS3P57727 454 aa10.72□□□□□ -0.69
CACNB3-219ENST00000551544 MRPS11P82912 194 aaKnown RBP10.72□□□□□ -0.69
CACNB3-219ENST00000551544 TMEM249Q2WGJ8 235 aa10.72□□□□□ -0.69
CACNB3-219ENST00000551544 TEX38Q6PEX7 206 aa10.72□□□□□ -0.69
CACNB3-219ENST00000551544 FAM169BQ8N8A8 192 aa10.72□□□□□ -0.69
CACNB3-219ENST00000551544 SLC24A4Q8NFF2 622 aa10.72□□□□□ -0.69
CACNB3-219ENST00000551544 MBD3L2Q8NHZ7 208 aaPredicted RBP10.72□□□□□ -0.69
CACNB3-219ENST00000551544 CA2P00918 260 aa10.72□□□□□ -0.69
CACNB3-219ENST00000551544 RAB4AP20338 218 aa10.72□□□□□ -0.69
CACNB3-219ENST00000551544 GLRXP35754 106 aa10.72□□□□□ -0.69
CACNB3-219ENST00000551544 MRPL52Q86TS9 123 aaKnown RBP10.72□□□□□ -0.69
CACNB3-219ENST00000551544 ZADH2Q8N4Q0 377 aa10.72□□□□□ -0.69
CACNB3-219ENST00000551544 STPG3Q8N7X2 389 aa10.72□□□□□ -0.69
CACNB3-219ENST00000551544 SFRP2Q96HF1 295 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms