RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 TMEM140Q9NV12 185 aa14.57□□□□□ -0.08
DDX54-208ENST00000551344 LSM4Q9Y4Z0 139 aaKnown RBP14.57□□□□□ -0.08
DDX54-208ENST00000551344 A0A1B0GW64 132 aa14.56□□□□□ -0.08
DDX54-208ENST00000551344 CTDSP2O14595 271 aa14.56□□□□□ -0.08
DDX54-208ENST00000551344 IFNA6P05013 189 aa14.56□□□□□ -0.08
DDX54-208ENST00000551344 TBPP20226 339 aa14.56□□□□□ -0.08
DDX54-208ENST00000551344 PSMB6P28072 239 aa14.56□□□□□ -0.08
DDX54-208ENST00000551344 LPAR6P43657 344 aa14.56□□□□□ -0.08
DDX54-208ENST00000551344 ERVK-16P61578 105 aa14.56□□□□□ -0.08
DDX54-208ENST00000551344 DEFA5Q01523 94 aa14.56□□□□□ -0.08
DDX54-208ENST00000551344 KLK9Q2XQG4 91 aa14.56□□□□□ -0.08
DDX54-208ENST00000551344 SLC38A6Q8IZM9 456 aa14.56□□□□□ -0.08
DDX54-208ENST00000551344 OR6Q1Q8NGQ2 317 aa14.56□□□□□ -0.08
DDX54-208ENST00000551344 FCAMRQ8WWV6 532 aa14.56□□□□□ -0.08
DDX54-208ENST00000551344 PRR25Q96S07 402 aa14.56□□□□□ -0.08
DDX54-208ENST00000551344 SRSF8Q9BRL6 282 aaKnown RBP14.56□□□□□ -0.08
DDX54-208ENST00000551344 COMMD5Q9GZQ3 224 aa14.56□□□□□ -0.08
DDX54-208ENST00000551344 MIXL1Q9H2W2 232 aa14.56□□□□□ -0.08
DDX54-208ENST00000551344 KLK9Q9UKQ9 250 aa14.56□□□□□ -0.08
DDX54-208ENST00000551344 TRAV3A0A0B4J244 114 aa14.55□□□□□ -0.08
DDX54-208ENST00000551344 MARCH11A6NNE9 402 aa14.55□□□□□ -0.08
DDX54-208ENST00000551344 OR2J3O76001 311 aa14.55□□□□□ -0.08
DDX54-208ENST00000551344 CTRB1P17538 263 aa14.55□□□□□ -0.08
DDX54-208ENST00000551344 OR2B8PP59922 312 aa14.55□□□□□ -0.08
DDX54-208ENST00000551344 ZNF585BQ52M93 769 aa14.55□□□□□ -0.08
DDX54-208ENST00000551344 RNASE10Q5GAN6 216 aaKnown RBP14.55□□□□□ -0.08
DDX54-208ENST00000551344 CTRB2Q6GPI1 263 aa14.55□□□□□ -0.08
DDX54-208ENST00000551344 DYNC2LI1Q8TCX1 351 aa14.55□□□□□ -0.08
DDX54-208ENST00000551344 B9D2Q9BPU9 175 aa14.55□□□□□ -0.08
DDX54-208ENST00000551344 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.54□□□□□ -0.08
DDX54-208ENST00000551344 CGB1A6NKQ9 187 aa14.54□□□□□ -0.08
DDX54-208ENST00000551344 M0QYG6 137 aa14.54□□□□□ -0.08
DDX54-208ENST00000551344 TRBV12-3P01733 135 aa14.54□□□□□ -0.08
DDX54-208ENST00000551344 MYOD1P15172 320 aa14.54□□□□□ -0.08
DDX54-208ENST00000551344 AREGP15514 252 aa14.54□□□□□ -0.08
DDX54-208ENST00000551344 HIST1H1BP16401 226 aaKnown RBP14.54□□□□□ -0.08
DDX54-208ENST00000551344 MRPS10P82664 201 aaKnown RBP14.54□□□□□ -0.08
DDX54-208ENST00000551344 SSBP1Q04837 148 aaKnown RBP14.54□□□□□ -0.08
DDX54-208ENST00000551344 EXOSC2Q13868 293 aaKnown RBP14.54□□□□□ -0.08
DDX54-208ENST00000551344 RPEL1Q2QD12 228 aa14.54□□□□□ -0.08
DDX54-208ENST00000551344 C15orf32Q32M92 178 aa14.54□□□□□ -0.08
DDX54-208ENST00000551344 PHLDA2Q53GA4 152 aa14.54□□□□□ -0.08
DDX54-208ENST00000551344 RNASE12Q5GAN4 147 aaKnown RBP14.54□□□□□ -0.08
DDX54-208ENST00000551344 THOC7Q6I9Y2 204 aaKnown RBP14.54□□□□□ -0.08
DDX54-208ENST00000551344 LAX1Q8IWV1 398 aa14.54□□□□□ -0.08
DDX54-208ENST00000551344 ARRDC1Q8N5I2 433 aa14.54□□□□□ -0.08
DDX54-208ENST00000551344 OR9G4Q8NGQ1 327 aa14.54□□□□□ -0.08
DDX54-208ENST00000551344 FANCD2OSQ96PS1 177 aa14.54□□□□□ -0.08
DDX54-208ENST00000551344 CCDC59Q9P031 241 aaKnown RBP14.54□□□□□ -0.08
DDX54-208ENST00000551344 RABL2AQ9UBK7 228 aaPredicted RBP14.54□□□□□ -0.08
DDX54-208ENST00000551344 FBXL7Q9UJT9 491 aa14.54□□□□□ -0.08
DDX54-208ENST00000551344 RABL2BQ9UNT1 228 aa14.54□□□□□ -0.08
DDX54-208ENST00000551344 GABARAPH6UMI1 98 aa14.53□□□□□ -0.08
DDX54-208ENST00000551344 NOL3O60936 208 aaKnown RBP14.53□□□□□ -0.08
DDX54-208ENST00000551344 LY86O95711 162 aa14.53□□□□□ -0.08
DDX54-208ENST00000551344 KRASP01116 189 aa14.53□□□□□ -0.08
DDX54-208ENST00000551344 CD3DP04234 171 aa14.53□□□□□ -0.08
DDX54-208ENST00000551344 DEFA4P12838 97 aa14.53□□□□□ -0.08
DDX54-208ENST00000551344 SYNJ2BPP57105 145 aa14.53□□□□□ -0.08
DDX54-208ENST00000551344 CD69Q07108 199 aa14.53□□□□□ -0.08
DDX54-208ENST00000551344 TBC1D26Q86UD7 250 aa14.53□□□□□ -0.08
DDX54-208ENST00000551344 TMEM229BQ8NBD8 167 aa14.53□□□□□ -0.08
DDX54-208ENST00000551344 SNAPC5O75971 98 aa14.52□□□□□ -0.09
DDX54-208ENST00000551344 CD74P04233 296 aa14.52□□□□□ -0.09
DDX54-208ENST00000551344 RPA2P15927 270 aa14.52□□□□□ -0.09
DDX54-208ENST00000551344 SPNP16150 400 aa14.52□□□□□ -0.09
DDX54-208ENST00000551344 PTBP1P26599 531 aaKnown RBP eCLIP14.52□□□□□ -0.09
DDX54-208ENST00000551344 TAS2R19P59542 299 aa14.52□□□□□ -0.09
DDX54-208ENST00000551344 HSD17B13Q7Z5P4 300 aaPredicted RBP14.52□□□□□ -0.09
DDX54-208ENST00000551344 LHFPL1Q86WI0 220 aa14.52□□□□□ -0.09
DDX54-208ENST00000551344 OR1L8Q8NGR8 309 aa14.52□□□□□ -0.09
DDX54-208ENST00000551344 ZNF486Q96H40 463 aaPredicted RBP14.52□□□□□ -0.09
DDX54-208ENST00000551344 DIRAS2Q96HU8 199 aa14.52□□□□□ -0.09
DDX54-208ENST00000551344 QTRT1Q9BXR0 403 aaKnown RBP14.52□□□□□ -0.09
DDX54-208ENST00000551344 TEX50A0A1B0GTY4 177 aa14.51□□□□□ -0.09
DDX54-208ENST00000551344 IGLC7A0M8Q6 106 aa14.51□□□□□ -0.09
DDX54-208ENST00000551344 BMPR1BO00238 502 aa14.51□□□□□ -0.09
DDX54-208ENST00000551344 IGLV1-51P01701 117 aa14.51□□□□□ -0.09
DDX54-208ENST00000551344 TRAPPC2P0DI81 140 aa14.51□□□□□ -0.09
DDX54-208ENST00000551344 TRAPPC2BP0DI82 140 aa14.51□□□□□ -0.09
DDX54-208ENST00000551344 G6PCP35575 357 aa14.51□□□□□ -0.09
DDX54-208ENST00000551344 IL34Q6ZMJ4 242 aa14.51□□□□□ -0.09
DDX54-208ENST00000551344 TSC22D3Q99576 134 aa14.51□□□□□ -0.09
DDX54-208ENST00000551344 FKBP11Q9NYL4 201 aa14.51□□□□□ -0.09
DDX54-208ENST00000551344 SIGLEC8Q9NYZ4 499 aa14.51□□□□□ -0.09
DDX54-208ENST00000551344 IGLV11-55A0A075B6I3 123 aa14.5□□□□□ -0.09
DDX54-208ENST00000551344 H3BMQ9 156 aa14.5□□□□□ -0.09
DDX54-208ENST00000551344 CTDSPLO15194 276 aa14.5□□□□□ -0.09
DDX54-208ENST00000551344 NDUFB8O95169 186 aa14.5□□□□□ -0.09
DDX54-208ENST00000551344 REG1AP05451 166 aa14.5□□□□□ -0.09
DDX54-208ENST00000551344 GP9P14770 177 aa14.5□□□□□ -0.09
DDX54-208ENST00000551344 RND3P61587 244 aa14.5□□□□□ -0.09
DDX54-208ENST00000551344 C19orf35Q6ZS72 473 aa14.5□□□□□ -0.09
DDX54-208ENST00000551344 TERB2Q8NHR7 220 aa14.5□□□□□ -0.09
DDX54-208ENST00000551344 ISOC1Q96CN7 298 aa14.5□□□□□ -0.09
DDX54-208ENST00000551344 NDUFA4L2Q9NRX3 87 aa14.5□□□□□ -0.09
DDX54-208ENST00000551344 THYN1Q9P016 225 aa14.5□□□□□ -0.09
DDX54-208ENST00000551344 PEMTQ9UBM1 199 aa14.5□□□□□ -0.09
DDX54-208ENST00000551344 PRNDQ9UKY0 176 aa14.5□□□□□ -0.09
DDX54-208ENST00000551344 SMAD5-AS1Q9Y6J3 95 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms