RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 LRTM2Q8N967 370 aa10.23□□□□□ -0.77
RAB5C-206ENST00000550406 GRPEL2Q8TAA5 225 aa10.23□□□□□ -0.77
RAB5C-206ENST00000550406 CASTOR1Q8WTX7 329 aa10.23□□□□□ -0.77
RAB5C-206ENST00000550406 SRSF12Q8WXF0 261 aaKnown RBP10.23□□□□□ -0.77
RAB5C-206ENST00000550406 ARPC1AQ92747 370 aa10.23□□□□□ -0.77
RAB5C-206ENST00000550406 IL22RA2Q969J5 263 aa10.23□□□□□ -0.77
RAB5C-206ENST00000550406 PALMDQ9NP74 551 aa10.23□□□□□ -0.77
RAB5C-206ENST00000550406 TEX50A0A1B0GTY4 177 aa10.22□□□□□ -0.77
RAB5C-206ENST00000550406 MSGN1A6NI15 193 aa10.22□□□□□ -0.77
RAB5C-206ENST00000550406 TEX22C9J3V5 150 aa10.22□□□□□ -0.77
RAB5C-206ENST00000550406 SOX15O60248 233 aa10.22□□□□□ -0.77
RAB5C-206ENST00000550406 OPN1MWP04001 364 aa10.22□□□□□ -0.77
RAB5C-206ENST00000550406 OPN1MW2P0DN77 364 aa10.22□□□□□ -0.77
RAB5C-206ENST00000550406 OPN1MW3P0DN78 364 aa10.22□□□□□ -0.77
RAB5C-206ENST00000550406 ANXA3P12429 323 aa10.22□□□□□ -0.77
RAB5C-206ENST00000550406 HLA-GP17693 338 aa10.22□□□□□ -0.77
RAB5C-206ENST00000550406 MAS1LP35410 378 aa10.22□□□□□ -0.77
RAB5C-206ENST00000550406 OR2B8PP59922 312 aa10.22□□□□□ -0.77
RAB5C-206ENST00000550406 CENPVQ7Z7K6 275 aaPredicted RBP10.22□□□□□ -0.77
RAB5C-206ENST00000550406 LGI3Q8N145 548 aa10.22□□□□□ -0.77
RAB5C-206ENST00000550406 SLC35G3Q8N808 338 aa10.22□□□□□ -0.77
RAB5C-206ENST00000550406 MINDY2Q8NBR6 621 aa10.22□□□□□ -0.77
RAB5C-206ENST00000550406 LFNGQ8NES3 379 aa10.22□□□□□ -0.77
RAB5C-206ENST00000550406 OR5AU1Q8NGC0 362 aa10.22□□□□□ -0.77
RAB5C-206ENST00000550406 CHPT1Q8WUD6 406 aa10.22□□□□□ -0.77
RAB5C-206ENST00000550406 LSM10Q969L4 123 aaKnown RBP10.22□□□□□ -0.77
RAB5C-206ENST00000550406 SEC22CQ9BRL7 303 aa10.22□□□□□ -0.77
RAB5C-206ENST00000550406 MARVELD1Q9BSK0 173 aa10.22□□□□□ -0.77
RAB5C-206ENST00000550406 TMEM14BQ9NUH8 114 aa10.22□□□□□ -0.77
RAB5C-206ENST00000550406 TENM1Q9UKZ4 2725 aa10.21□□□□□ -0.77
RAB5C-206ENST00000550406 TRAV41A0A0B4J266 112 aa10.21□□□□□ -0.77
RAB5C-206ENST00000550406 A0A0B4J2A0 478 aa10.21□□□□□ -0.77
RAB5C-206ENST00000550406 PSMB11A5LHX3 300 aa10.21□□□□□ -0.77
RAB5C-206ENST00000550406 HMX3A6NHT5 357 aa10.21□□□□□ -0.77
RAB5C-206ENST00000550406 HLA-AP01891 365 aaKnown RBP10.21□□□□□ -0.77
RAB5C-206ENST00000550406 FGF2P09038 288 aa10.21□□□□□ -0.77
RAB5C-206ENST00000550406 APELAP0DMC3 54 aa10.21□□□□□ -0.77
RAB5C-206ENST00000550406 CD28P10747 220 aa10.21□□□□□ -0.77
RAB5C-206ENST00000550406 RPL27AP46776 148 aaKnown RBP10.21□□□□□ -0.77
RAB5C-206ENST00000550406 AKR1C2P52895 323 aa10.21□□□□□ -0.77
RAB5C-206ENST00000550406 DCTN2Q13561 401 aaKnown RBP10.21□□□□□ -0.77
RAB5C-206ENST00000550406 ECSCRQ19T08 205 aa10.21□□□□□ -0.77
RAB5C-206ENST00000550406 C4orf46Q504U0 113 aa10.21□□□□□ -0.77
RAB5C-206ENST00000550406 AKIRIN2Q53H80 203 aa10.21□□□□□ -0.77
RAB5C-206ENST00000550406 NMSQ5H8A3 153 aa10.21□□□□□ -0.77
RAB5C-206ENST00000550406 UNQ5815/PRO19632Q6UWF5 114 aa10.21□□□□□ -0.77
RAB5C-206ENST00000550406 C12orf54Q6X4T0 127 aa10.21□□□□□ -0.77
RAB5C-206ENST00000550406 ABHD5Q8WTS1 349 aa10.21□□□□□ -0.77
RAB5C-206ENST00000550406 ZNF747Q9BV97 191 aa10.21□□□□□ -0.77
RAB5C-206ENST00000550406 QTRT1Q9BXR0 403 aaKnown RBP10.21□□□□□ -0.77
RAB5C-206ENST00000550406 SHPKQ9UHJ6 478 aa10.21□□□□□ -0.77
RAB5C-206ENST00000550406 COL6A5A8TX70 2615 aa10.21□□□□□ -0.78
RAB5C-206ENST00000550406 C15orf61A6NNL5 157 aa10.2□□□□□ -0.78
RAB5C-206ENST00000550406 INMT-MINDY4F8WBC2 141 aa10.2□□□□□ -0.78
RAB5C-206ENST00000550406 CREBL2O60519 120 aaPredicted RBP10.2□□□□□ -0.78
RAB5C-206ENST00000550406 SNAPC5O75971 98 aa10.2□□□□□ -0.78
RAB5C-206ENST00000550406 DUS4LO95620 317 aaKnown RBP10.2□□□□□ -0.78
RAB5C-206ENST00000550406 IGLV1-40P01703 118 aa10.2□□□□□ -0.78
RAB5C-206ENST00000550406 IL5P05113 134 aa10.2□□□□□ -0.78
RAB5C-206ENST00000550406 KIAA0141Q14154 515 aaPredicted RBP10.2□□□□□ -0.78
RAB5C-206ENST00000550406 LCNL1Q6ZST4 164 aa10.2□□□□□ -0.78
RAB5C-206ENST00000550406 C11orf44Q8N8P7 122 aa10.2□□□□□ -0.78
RAB5C-206ENST00000550406 OR10W1Q8NGF6 305 aa10.2□□□□□ -0.78
RAB5C-206ENST00000550406 OR4A16Q8NH70 328 aa10.2□□□□□ -0.78
RAB5C-206ENST00000550406 FYTTD1Q96QD9 318 aaKnown RBP10.2□□□□□ -0.78
RAB5C-206ENST00000550406 CITED1Q99966 193 aa10.2□□□□□ -0.78
RAB5C-206ENST00000550406 NDUFA4L2Q9NRX3 87 aa10.2□□□□□ -0.78
RAB5C-206ENST00000550406 PRNDQ9UKY0 176 aa10.2□□□□□ -0.78
RAB5C-206ENST00000550406 FOXA2Q9Y261 457 aaPredicted RBP10.2□□□□□ -0.78
RAB5C-206ENST00000550406 OR51B2Q9Y5P1 312 aa10.2□□□□□ -0.78
RAB5C-206ENST00000550406 ST8SIA3O43173 380 aa10.19□□□□□ -0.78
RAB5C-206ENST00000550406 ACTL6BO94805 426 aa10.19□□□□□ -0.78
RAB5C-206ENST00000550406 ATG12O94817 140 aa10.19□□□□□ -0.78
RAB5C-206ENST00000550406 PTTG1O95997 202 aa10.19□□□□□ -0.78
RAB5C-206ENST00000550406 IGHG4P01861 327 aa10.19□□□□□ -0.78
RAB5C-206ENST00000550406 HOXB5P09067 269 aa10.19□□□□□ -0.78
RAB5C-206ENST00000550406 AREGP15514 252 aa10.19□□□□□ -0.78
RAB5C-206ENST00000550406 VDAC1P21796 283 aa10.19□□□□□ -0.78
RAB5C-206ENST00000550406 SRPXP78539 464 aa10.19□□□□□ -0.78
RAB5C-206ENST00000550406 CD83Q01151 205 aa10.19□□□□□ -0.78
RAB5C-206ENST00000550406 TMEM267Q0VDI3 215 aaPredicted RBP10.19□□□□□ -0.78
RAB5C-206ENST00000550406 AARDQ4LEZ3 155 aa10.19□□□□□ -0.78
RAB5C-206ENST00000550406 PLET1Q6UQ28 207 aa10.19□□□□□ -0.78
RAB5C-206ENST00000550406 ZNF429Q86V71 674 aa10.19□□□□□ -0.78
RAB5C-206ENST00000550406 FAM219AQ8IW50 185 aa10.19□□□□□ -0.78
RAB5C-206ENST00000550406 OR5T1Q8NG75 326 aa10.19□□□□□ -0.78
RAB5C-206ENST00000550406 OR1L8Q8NGR8 309 aa10.19□□□□□ -0.78
RAB5C-206ENST00000550406 ZNF431Q8TF32 576 aaPredicted RBP10.19□□□□□ -0.78
RAB5C-206ENST00000550406 MITD1Q8WV92 249 aa10.19□□□□□ -0.78
RAB5C-206ENST00000550406 RRNAD1Q96FB5 475 aaKnown RBP10.19□□□□□ -0.78
RAB5C-206ENST00000550406 COMMD5Q9GZQ3 224 aa10.19□□□□□ -0.78
RAB5C-206ENST00000550406 KLK15Q9H2R5 256 aa10.19□□□□□ -0.78
RAB5C-206ENST00000550406 A0A1W2PN81 502 aa10.18□□□□□ -0.78
RAB5C-206ENST00000550406 DUXBA0A1W2PPF3 345 aa10.18□□□□□ -0.78
RAB5C-206ENST00000550406 IGLC7A0M8Q6 106 aa10.18□□□□□ -0.78
RAB5C-206ENST00000550406 ADARB2-AS1A8MUL3 147 aa10.18□□□□□ -0.78
RAB5C-206ENST00000550406 MPTX1A8MV57 137 aa10.18□□□□□ -0.78
RAB5C-206ENST00000550406 RBMXL2O75526 392 aaKnown RBP10.18□□□□□ -0.78
RAB5C-206ENST00000550406 ADAP1O75689 374 aa10.18□□□□□ -0.78
RAB5C-206ENST00000550406 TRAPPC2P0DI81 140 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms