RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 FAM19A2Q8N3H0 131 aa8.6□□□□□ -1.03
SMARCC2-209ENST00000550164 GTF3AQ92664 365 aaKnown RBP8.6□□□□□ -1.03
SMARCC2-209ENST00000550164 ZNF703Q9H7S9 590 aaPredicted RBP8.6□□□□□ -1.03
SMARCC2-209ENST00000550164 IL36BQ9NZH7 164 aa8.6□□□□□ -1.03
SMARCC2-209ENST00000550164 PILRBQ9UKJ0 227 aa8.6□□□□□ -1.03
SMARCC2-209ENST00000550164 SPTAN1Q13813 2472 aaKnown RBP8.6□□□□□ -1.03
SMARCC2-209ENST00000550164 INTS1Q8N201 2190 aaKnown RBP8.6□□□□□ -1.03
SMARCC2-209ENST00000550164 NDUFB3O43676 98 aa8.6□□□□□ -1.03
SMARCC2-209ENST00000550164 PSG7Q13046 419 aa8.6□□□□□ -1.03
SMARCC2-209ENST00000550164 SLC35E4Q6ICL7 350 aa8.6□□□□□ -1.03
SMARCC2-209ENST00000550164 FAM214BQ7L5A3 538 aa8.6□□□□□ -1.03
SMARCC2-209ENST00000550164 TCTAP57738 103 aa8.6□□□□□ -1.03
SMARCC2-209ENST00000550164 GGNQ86UU5 652 aa8.6□□□□□ -1.03
SMARCC2-209ENST00000550164 C1orf210Q8IVY1 113 aa8.6□□□□□ -1.03
SMARCC2-209ENST00000550164 OR1L8Q8NGR8 309 aa8.6□□□□□ -1.03
SMARCC2-209ENST00000550164 OCC1Q8TAD7 63 aa8.6□□□□□ -1.03
SMARCC2-209ENST00000550164 RNF2Q99496 336 aa8.6□□□□□ -1.03
SMARCC2-209ENST00000550164 PINLYPA6NC86 204 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 A6NNC1 897 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 C21orf140B9A014 251 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 ISLRO14498 428 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 CCL13Q99616 98 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 GAL3ST2Q9H3Q3 398 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 NGBQ9NPG2 151 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 CALYQ9NYX4 217 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 IGKV1-6A0A0C4DH72 117 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 A0A1W2PN81 502 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 DPRXA6NFQ7 191 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 LILRA1O75019 489 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 CA2P00918 260 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 GATA2P23769 480 aaPredicted RBP8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 TFPI2P48307 235 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 LRRC10Q5BKY1 277 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 PCSK4Q6UW60 755 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 BHLHA15Q7RTS1 189 aaPredicted RBP8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 SMIM15Q7Z3B0 74 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 OR2T6Q8NHC8 308 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 RNF7Q9UBF6 113 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 ARHGAP21Q5T5U3 1957 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 THADAQ6YHU6 1953 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 ACACAQ13085 2346 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 IGFBP2P18065 325 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 TNXAQ16473 311 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 NRN1LQ496H8 165 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 ZNF497Q6ZNH5 498 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 SSX8Q7RTT4 187 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 SAP30LQ9HAJ7 183 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 HSPB7Q9UBY9 170 aa8.59□□□□□ -1.03
SMARCC2-209ENST00000550164 DENND4AQ7Z401 1863 aa8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 RND2P52198 227 aa8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 ATP1A1-AS1Q5TC04 95 aa8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 LINC01551Q86U37 167 aa8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 GBGT1Q8N5D6 347 aa8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 LYPD6BQ8NI32 183 aa8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 VSTM2AQ8TAG5 236 aa8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 ITLN1Q8WWA0 313 aa8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 AMMECR1Q9Y4X0 333 aaPredicted RBP8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 C8orf88P0DMB2 117 aa8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 PAX9P55771 341 aa8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 ST6GALNAC3Q8NDV1 305 aa8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 MIEN1Q9BRT3 115 aa8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 RNASE7Q9H1E1 156 aaKnown RBP8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 DNAJC4Q9NNZ3 241 aa8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 FREM1Q5H8C1 2179 aa8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 H3BTX0 84 aa8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 AMY1AP04745 511 aa8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 NUTF2P61970 127 aaKnown RBP8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 RPL30P62888 115 aaKnown RBP8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 CCL8P80075 99 aa8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 ARSJQ5FYB0 599 aaPredicted RBP8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 ASCL4Q6XD76 172 aa8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 MAP1LC3CQ9BXW4 147 aa8.58□□□□□ -1.04
SMARCC2-209ENST00000550164 A0A1B0GUS0 222 aa8.57□□□□□ -1.04
SMARCC2-209ENST00000550164 FOXA3P55318 350 aaPredicted RBP8.57□□□□□ -1.04
SMARCC2-209ENST00000550164 LINC00205P59089 165 aa8.57□□□□□ -1.04
SMARCC2-209ENST00000550164 ACP7Q6ZNF0 438 aa8.57□□□□□ -1.04
SMARCC2-209ENST00000550164 PGPA6NDG6 321 aa8.57□□□□□ -1.04
SMARCC2-209ENST00000550164 EREGO14944 169 aa8.57□□□□□ -1.04
SMARCC2-209ENST00000550164 LHX2P50458 406 aa8.57□□□□□ -1.04
SMARCC2-209ENST00000550164 PMCHL1Q16048 86 aa8.57□□□□□ -1.04
SMARCC2-209ENST00000550164 MIR17HGQ75NE6 70 aa8.57□□□□□ -1.04
SMARCC2-209ENST00000550164 WDR83OSQ9Y284 106 aa8.57□□□□□ -1.04
SMARCC2-209ENST00000550164 PRRG2O14669 202 aa8.57□□□□□ -1.04
SMARCC2-209ENST00000550164 TEX38Q6PEX7 206 aa8.57□□□□□ -1.04
SMARCC2-209ENST00000550164 TMEM14EPQ6UXP3 125 aa8.57□□□□□ -1.04
SMARCC2-209ENST00000550164 OPN3Q9H1Y3 402 aaPredicted RBP8.57□□□□□ -1.04
SMARCC2-209ENST00000550164 NRN1Q9NPD7 142 aa8.57□□□□□ -1.04
SMARCC2-209ENST00000550164 JPT1Q9UK76 154 aa8.57□□□□□ -1.04
SMARCC2-209ENST00000550164 OBSL1O75147 1896 aa8.57□□□□□ -1.04
SMARCC2-209ENST00000550164 MED13LQ71F56 2210 aa8.57□□□□□ -1.04
SMARCC2-209ENST00000550164 PSPNO60542 156 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 COX7A1P24310 79 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 CLDN18P56856 261 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 HCP5Q6MZN7 132 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 OR4F17Q8NGA8 305 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 C2orf88Q9BSF0 95 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 TMSB15BA0A087X1C1 80 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 IGHV3-72A0A0B4J1Y9 119 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 A8MWL6 223 aa8.56□□□□□ -1.04
SMARCC2-209ENST00000550164 A8MWP6 167 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms