RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 COMMD5Q9GZQ3 224 aa20.14■□□□□ 0.81
CPSF6-205ENST00000550075 COPZ2Q9P299 210 aa20.14■□□□□ 0.81
CPSF6-205ENST00000550075 UPK2O00526 184 aa20.13■□□□□ 0.81
CPSF6-205ENST00000550075 PIGPP57054 158 aa20.13■□□□□ 0.81
CPSF6-205ENST00000550075 BEAN1Q3B7T3 259 aa20.13■□□□□ 0.81
CPSF6-205ENST00000550075 KPRPQ5T749 579 aaPredicted RBP20.13■□□□□ 0.81
CPSF6-205ENST00000550075 FAAP20Q6NZ36 180 aa20.13■□□□□ 0.81
CPSF6-205ENST00000550075 CADM3Q8N126 398 aa20.13■□□□□ 0.81
CPSF6-205ENST00000550075 V9GYH0 126 aa20.13■□□□□ 0.81
CPSF6-205ENST00000550075 SERPINE2P07093 398 aa20.12■□□□□ 0.81
CPSF6-205ENST00000550075 FAUP35544 74 aaKnown RBP20.12■□□□□ 0.81
CPSF6-205ENST00000550075 AP3S2P59780 193 aa20.12■□□□□ 0.81
CPSF6-205ENST00000550075 SURF2Q15527 256 aaPredicted RBP20.12■□□□□ 0.81
CPSF6-205ENST00000550075 ZNF585BQ52M93 769 aa20.12■□□□□ 0.81
CPSF6-205ENST00000550075 CCDC190Q86UF4 302 aa20.12■□□□□ 0.81
CPSF6-205ENST00000550075 OR13C8Q8NGS7 320 aa20.12■□□□□ 0.81
CPSF6-205ENST00000550075 THAP7Q9BT49 309 aaPredicted RBP20.12■□□□□ 0.81
CPSF6-205ENST00000550075 C14orf166Q9Y224 244 aaKnown RBP20.12■□□□□ 0.81
CPSF6-205ENST00000550075 ZNF257Q9Y2Q1 563 aa20.12■□□□□ 0.81
CPSF6-205ENST00000550075 TEX22C9J3V5 150 aa20.11■□□□□ 0.81
CPSF6-205ENST00000550075 H0Y980 276 aa20.11■□□□□ 0.81
CPSF6-205ENST00000550075 KRASP01116 189 aa20.11■□□□□ 0.81
CPSF6-205ENST00000550075 IGHV3-11P01762 117 aa20.11■□□□□ 0.81
CPSF6-205ENST00000550075 CTSDP07339 412 aaPredicted RBP20.11■□□□□ 0.81
CPSF6-205ENST00000550075 ZNF735P0CB33 412 aa20.11■□□□□ 0.81
CPSF6-205ENST00000550075 RPA2P15927 270 aa20.11■□□□□ 0.81
CPSF6-205ENST00000550075 PI3P19957 117 aa20.11■□□□□ 0.81
CPSF6-205ENST00000550075 THOC7Q6I9Y2 204 aaKnown RBP20.11■□□□□ 0.81
CPSF6-205ENST00000550075 Q8N402 240 aa20.11■□□□□ 0.81
CPSF6-205ENST00000550075 TTC9CQ8N5M4 171 aa20.11■□□□□ 0.81
CPSF6-205ENST00000550075 MARCH1Q8TCQ1 289 aa20.11■□□□□ 0.81
CPSF6-205ENST00000550075 USMG5Q96IX5 58 aa20.11■□□□□ 0.81
CPSF6-205ENST00000550075 TSC22D3Q99576 134 aa20.11■□□□□ 0.81
CPSF6-205ENST00000550075 SCP2D1Q9UJQ7 156 aa20.11■□□□□ 0.81
CPSF6-205ENST00000550075 LINC01619G3V211 115 aa20.1■□□□□ 0.81
CPSF6-205ENST00000550075 SNAPC5O75971 98 aa20.1■□□□□ 0.81
CPSF6-205ENST00000550075 DHFRP00374 187 aa20.1■□□□□ 0.81
CPSF6-205ENST00000550075 SLC2A8Q9NY64 477 aa20.1■□□□□ 0.81
CPSF6-205ENST00000550075 HMX3A6NHT5 357 aa20.09■□□□□ 0.81
CPSF6-205ENST00000550075 FAM223BA6NKX1 122 aa20.09■□□□□ 0.81
CPSF6-205ENST00000550075 NPIPB5A8MRT5 1133 aa20.09■□□□□ 0.81
CPSF6-205ENST00000550075 B3GALNT1O75752 331 aa20.09■□□□□ 0.81
CPSF6-205ENST00000550075 IL6RP08887 468 aaPredicted RBP20.09■□□□□ 0.81
CPSF6-205ENST00000550075 G6PCP35575 357 aa20.09■□□□□ 0.81
CPSF6-205ENST00000550075 FAM223AQ8IWN6 122 aa20.09■□□□□ 0.81
CPSF6-205ENST00000550075 SRSF8Q9BRL6 282 aaKnown RBP20.09■□□□□ 0.81
CPSF6-205ENST00000550075 ALX4Q9H161 411 aaPredicted RBP20.09■□□□□ 0.81
CPSF6-205ENST00000550075 MCUBQ9NWR8 336 aa20.09■□□□□ 0.81
CPSF6-205ENST00000550075 TRAV3A0A0B4J244 114 aa20.08■□□□□ 0.81
CPSF6-205ENST00000550075 ATG12O94817 140 aa20.08■□□□□ 0.81
CPSF6-205ENST00000550075 ETV6P41212 452 aa20.08■□□□□ 0.81
CPSF6-205ENST00000550075 OR2B8PP59922 312 aa20.08■□□□□ 0.81
CPSF6-205ENST00000550075 OR51S1Q8NGJ8 323 aa20.08■□□□□ 0.81
CPSF6-205ENST00000550075 QTRT1Q9BXR0 403 aaKnown RBP20.08■□□□□ 0.81
CPSF6-205ENST00000550075 PRNDQ9UKY0 176 aa20.08■□□□□ 0.81
CPSF6-205ENST00000550075 C3orf85A0A1B0GTC6 90 aa20.07■□□□□ 0.8
CPSF6-205ENST00000550075 HSPB1P04792 205 aaKnown RBP20.07■□□□□ 0.8
CPSF6-205ENST00000550075 RHOGP84095 191 aa20.07■□□□□ 0.8
CPSF6-205ENST00000550075 ZNF79Q15937 498 aa20.07■□□□□ 0.8
CPSF6-205ENST00000550075 TOMM5Q8N4H5 51 aa20.07■□□□□ 0.8
CPSF6-205ENST00000550075 OR6Q1Q8NGQ2 317 aa20.07■□□□□ 0.8
CPSF6-205ENST00000550075 OR1L8Q8NGR8 309 aa20.07■□□□□ 0.8
CPSF6-205ENST00000550075 TRIM63Q969Q1 353 aa20.07■□□□□ 0.8
CPSF6-205ENST00000550075 SCGB3A2Q96PL1 93 aa20.07■□□□□ 0.8
CPSF6-205ENST00000550075 FKBP11Q9NYL4 201 aa20.07■□□□□ 0.8
CPSF6-205ENST00000550075 MYOD1P15172 320 aa20.06■□□□□ 0.8
CPSF6-205ENST00000550075 H2BFWTQ7Z2G1 175 aa20.06■□□□□ 0.8
CPSF6-205ENST00000550075 REC114Q7Z4M0 266 aa20.06■□□□□ 0.8
CPSF6-205ENST00000550075 HSD17B13Q7Z5P4 300 aaPredicted RBP20.06■□□□□ 0.8
CPSF6-205ENST00000550075 NECAP1Q8NC96 275 aa20.06■□□□□ 0.8
CPSF6-205ENST00000550075 DEDD2Q8WXF8 326 aa20.06■□□□□ 0.8
CPSF6-205ENST00000550075 MRGPRFQ96AM1 343 aa20.06■□□□□ 0.8
CPSF6-205ENST00000550075 RANGRFQ9HD47 186 aaPredicted RBP20.06■□□□□ 0.8
CPSF6-205ENST00000550075 IGHV4OR15-8A0A075B7B6 117 aa20.05■□□□□ 0.8
CPSF6-205ENST00000550075 A0A087WW49 117 aa20.05■□□□□ 0.8
CPSF6-205ENST00000550075 E7EUB6 86 aa20.05■□□□□ 0.8
CPSF6-205ENST00000550075 PSMB6P28072 239 aa20.05■□□□□ 0.8
CPSF6-205ENST00000550075 C9orf66Q5T8R8 295 aa20.05■□□□□ 0.8
CPSF6-205ENST00000550075 FOXB2Q5VYV0 432 aa20.05■□□□□ 0.8
CPSF6-205ENST00000550075 SEC22AQ96IW7 307 aa20.05■□□□□ 0.8
CPSF6-205ENST00000550075 TP53RKQ96S44 253 aa20.05■□□□□ 0.8
CPSF6-205ENST00000550075 ZMAT5Q9UDW3 170 aaKnown RBP20.05■□□□□ 0.8
CPSF6-205ENST00000550075 TRBV9A0A0B4J1U6 114 aa20.04■□□□□ 0.8
CPSF6-205ENST00000550075 A0A1B0GW64 132 aa20.04■□□□□ 0.8
CPSF6-205ENST00000550075 CYB5BO43169 146 aa20.04■□□□□ 0.8
CPSF6-205ENST00000550075 CRYGCP07315 174 aa20.04■□□□□ 0.8
CPSF6-205ENST00000550075 TRAPPC2P0DI81 140 aa20.04■□□□□ 0.8
CPSF6-205ENST00000550075 TRAPPC2BP0DI82 140 aa20.04■□□□□ 0.8
CPSF6-205ENST00000550075 DEFA4P12838 97 aa20.04■□□□□ 0.8
CPSF6-205ENST00000550075 AREGP15514 252 aa20.04■□□□□ 0.8
CPSF6-205ENST00000550075 HIST1H1BP16401 226 aaKnown RBP20.04■□□□□ 0.8
CPSF6-205ENST00000550075 ZP3P21754 424 aa20.04■□□□□ 0.8
CPSF6-205ENST00000550075 AKR1C2P52895 323 aa20.04■□□□□ 0.8
CPSF6-205ENST00000550075 DEFA5Q01523 94 aa20.04■□□□□ 0.8
CPSF6-205ENST00000550075 ATP5G2Q06055 141 aa20.04■□□□□ 0.8
CPSF6-205ENST00000550075 KLF9Q13886 244 aaPredicted RBP20.04■□□□□ 0.8
CPSF6-205ENST00000550075 TRIM16LQ309B1 348 aa20.04■□□□□ 0.8
CPSF6-205ENST00000550075 FAM209BQ5JX69 171 aa20.04■□□□□ 0.8
CPSF6-205ENST00000550075 OR5B3Q8NH48 314 aa20.04■□□□□ 0.8
CPSF6-205ENST00000550075 AKIP1Q9NQ31 210 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms