RNA–Protein interactions for RNA: ENST00000549842.1

CPNE8-206, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-206ENST00000549842 MED28Q9H204 178 aa2.46□□□□□ -2.02
CPNE8-206ENST00000549842 TRIM45Q9H8W5 580 aaPredicted RBP2.46□□□□□ -2.02
CPNE8-206ENST00000549842 ZNF286AQ9HBT8 521 aa2.46□□□□□ -2.02
CPNE8-206ENST00000549842 DNAJC12Q9UKB3 198 aa2.46□□□□□ -2.02
CPNE8-206ENST00000549842 TENM2Q9NT68 2774 aa2.46□□□□□ -2.02
CPNE8-206ENST00000549842 MED13Q9UHV7 2174 aa2.46□□□□□ -2.02
CPNE8-206ENST00000549842 PHIPQ8WWQ0 1821 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 ABCA13Q86UQ4 5058 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 SVEP1Q4LDE5 3571 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 TRBV24-1A0A075B6N3 115 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.45□□□□□ -2.02
CPNE8-206ENST00000549842 TRAV8-1A0A0A6YYK1 113 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 C5orf49A4QMS7 147 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 TMEM210A6NLX4 147 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 H3BMM0 161 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 KCNK1O00180 336 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 IL3P08700 152 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 CRABP2P29373 138 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 DDTP30046 118 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 HSPA9P38646 679 aaKnown RBP2.45□□□□□ -2.02
CPNE8-206ENST00000549842 KRTAP10-8P60410 259 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 FABP5Q01469 135 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 TMEM267Q0VDI3 215 aaPredicted RBP2.45□□□□□ -2.02
CPNE8-206ENST00000549842 PDK2Q15119 407 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 CLVS2Q5SYC1 327 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 LYZL2Q7Z4W2 148 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 ATP5L2Q7Z4Y8 100 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 HS3ST5Q8IZT8 346 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 TMEM161BQ8NDZ6 487 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 ZNF680Q8NEM1 530 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 OR11G2Q8NGC1 345 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 MFSD8Q8NHS3 518 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 JOSD2Q8TAC2 188 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 Q8WTZ3 238 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 UBE2WQ96B02 151 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 TMA16Q96EY4 203 aaKnown RBP2.45□□□□□ -2.02
CPNE8-206ENST00000549842 ABHD14BQ96IU4 210 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 ZNF2Q9BSG1 426 aaPredicted RBP2.45□□□□□ -2.02
CPNE8-206ENST00000549842 RSPO3Q9BXY4 272 aaPredicted RBP2.45□□□□□ -2.02
CPNE8-206ENST00000549842 DHCR7Q9UBM7 475 aaKnown RBP2.45□□□□□ -2.02
CPNE8-206ENST00000549842 RPUSD1Q9UJJ7 312 aaKnown RBP2.45□□□□□ -2.02
CPNE8-206ENST00000549842 DKKL1Q9UK85 242 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 FIS1Q9Y3D6 152 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 PHLDA3Q9Y5J5 127 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 ALG5Q9Y673 324 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 CDC42BPAQ5VT25 1732 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 MEGF8Q7Z7M0 2845 aa2.45□□□□□ -2.02
CPNE8-206ENST00000549842 EVC2Q86UK5 1308 aa2.44□□□□□ -2.02
CPNE8-206ENST00000549842 FAM208AQ9UK61 1670 aaKnown RBP2.44□□□□□ -2.02
CPNE8-206ENST00000549842 A0A0B4J2C4 111 aa2.44□□□□□ -2.02
CPNE8-206ENST00000549842 STK16O75716 305 aa2.44□□□□□ -2.02
CPNE8-206ENST00000549842 IGHV3-53P01767 116 aa2.44□□□□□ -2.02
CPNE8-206ENST00000549842 SLCO1A2P46721 670 aa2.44□□□□□ -2.02
CPNE8-206ENST00000549842 ACTBP60709 375 aa2.44□□□□□ -2.02
CPNE8-206ENST00000549842 RPS24P62847 133 aaKnown RBP2.44□□□□□ -2.02
CPNE8-206ENST00000549842 ACTG1P63261 375 aa2.44□□□□□ -2.02
CPNE8-206ENST00000549842 HLA-DRB3P79483 266 aa2.44□□□□□ -2.02
CPNE8-206ENST00000549842 APOFQ13790 326 aa2.44□□□□□ -2.02
CPNE8-206ENST00000549842 SAPCD1Q5SSQ6 148 aa2.44□□□□□ -2.02
CPNE8-206ENST00000549842 GPR32P1Q8NGA4 272 aa2.44□□□□□ -2.02
CPNE8-206ENST00000549842 OR8K1Q8NGG5 319 aa2.44□□□□□ -2.02
CPNE8-206ENST00000549842 OR2V1Q8NHB1 315 aa2.44□□□□□ -2.02
CPNE8-206ENST00000549842 C16orf78Q8WTQ4 265 aa2.44□□□□□ -2.02
CPNE8-206ENST00000549842 CCDC42Q96M95 316 aa2.44□□□□□ -2.02
CPNE8-206ENST00000549842 OR51V1Q9H2C8 321 aa2.44□□□□□ -2.02
CPNE8-206ENST00000549842 HES4Q9HCC6 221 aa2.44□□□□□ -2.02
CPNE8-206ENST00000549842 PRO0461Q9UI25 63 aa2.44□□□□□ -2.02
CPNE8-206ENST00000549842 ZNF230Q9UIE0 474 aaPredicted RBP2.44□□□□□ -2.02
CPNE8-206ENST00000549842 IGKV1-12A0A0C4DH73 117 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 LINC00862A6NCI5 91 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 A6NED7 52 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 EEF1E1O43324 174 aaKnown RBP2.43□□□□□ -2.02
CPNE8-206ENST00000549842 SH2D1AO60880 128 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 DEDDO75618 318 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 RPP14O95059 124 aaKnown RBP2.43□□□□□ -2.02
CPNE8-206ENST00000549842 IGKV1D-12P01611 117 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 IGLV3-27P01718 113 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 RPS17P08708 135 aaKnown RBP2.43□□□□□ -2.02
CPNE8-206ENST00000549842 HIST1H1EP10412 219 aaKnown RBP2.43□□□□□ -2.02
CPNE8-206ENST00000549842 CD36P16671 472 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 PRPS1L1P21108 318 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 CDK2P24941 298 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 HOXA6P31267 233 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 HAAOP46952 286 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 OR1E2P47887 323 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 HERVK_113P63121 156 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 STX5Q13190 355 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 C10orf91Q5T1B1 145 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 C1orf195Q5TG92 126 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 TMEM136Q6ZRR5 245 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 GID4Q8IVV7 300 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 OR1M1Q8NGA1 313 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 OR1P1Q8NH06 330 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 HIST1H2BAQ96A08 127 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 OTUB2Q96DC9 234 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 OR51I2Q9H344 312 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 PSTPIP2Q9H939 334 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 TAS2R1Q9NYW7 299 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 LINC00588Q9Y4M8 146 aa2.43□□□□□ -2.02
CPNE8-206ENST00000549842 CCDC141Q6ZP82 1450 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms