RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 HIPK2Q9H2X6 1198 aa9.69□□□□□ -0.86
PTPRR-209ENST00000549308 ZNF430Q9H8G1 570 aaPredicted RBP9.69□□□□□ -0.86
PTPRR-209ENST00000549308 HEYLQ9NQ87 328 aaPredicted RBP9.69□□□□□ -0.86
PTPRR-209ENST00000549308 KIAA1456Q9P272 454 aa9.69□□□□□ -0.86
PTPRR-209ENST00000549308 FBXL17Q9UF56 701 aa9.69□□□□□ -0.86
PTPRR-209ENST00000549308 PAIP2BQ9ULR5 123 aaKnown RBP9.69□□□□□ -0.86
PTPRR-209ENST00000549308 ZNF257Q9Y2Q1 563 aa9.69□□□□□ -0.86
PTPRR-209ENST00000549308 MED13LQ71F56 2210 aa9.68□□□□□ -0.86
PTPRR-209ENST00000549308 WNK2Q9Y3S1 2297 aa9.68□□□□□ -0.86
PTPRR-209ENST00000549308 TEX50A0A1B0GTY4 177 aa9.68□□□□□ -0.86
PTPRR-209ENST00000549308 TAAR5O14804 337 aa9.68□□□□□ -0.86
PTPRR-209ENST00000549308 SMAD7O15105 426 aaKnown RBP9.68□□□□□ -0.86
PTPRR-209ENST00000549308 LY86O95711 162 aa9.68□□□□□ -0.86
PTPRR-209ENST00000549308 AVPP01185 164 aa9.68□□□□□ -0.86
PTPRR-209ENST00000549308 CRYGBP07316 175 aa9.68□□□□□ -0.86
PTPRR-209ENST00000549308 TMEM11P17152 192 aa9.68□□□□□ -0.86
PTPRR-209ENST00000549308 UBA52P62987 128 aaKnown RBP9.68□□□□□ -0.86
PTPRR-209ENST00000549308 NHLH2Q02577 135 aa9.68□□□□□ -0.86
PTPRR-209ENST00000549308 PDLIM3Q53GG5 364 aaPredicted RBP9.68□□□□□ -0.86
PTPRR-209ENST00000549308 KLF17Q5JT82 389 aaPredicted RBP9.68□□□□□ -0.86
PTPRR-209ENST00000549308 MMD2Q8IY49 270 aa9.68□□□□□ -0.86
PTPRR-209ENST00000549308 BSCL2Q96G97 398 aaPredicted RBP9.68□□□□□ -0.86
PTPRR-209ENST00000549308 FBXL15Q9H469 300 aa9.68□□□□□ -0.86
PTPRR-209ENST00000549308 TPSG1Q9NRR2 321 aa9.68□□□□□ -0.86
PTPRR-209ENST00000549308 SIGLEC9Q9Y336 463 aa9.68□□□□□ -0.86
PTPRR-209ENST00000549308 FAM96BQ9Y3D0 163 aa9.68□□□□□ -0.86
PTPRR-209ENST00000549308 STRAPQ9Y3F4 350 aaKnown RBP9.68□□□□□ -0.86
PTPRR-209ENST00000549308 CRYBG3Q68DQ2 2970 aa9.68□□□□□ -0.86
PTPRR-209ENST00000549308 A0A0U1RQK1 487 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 RRHO14718 337 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 NBR2O15453 112 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 CST7O76096 145 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 ACTL6BO94805 426 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 FAM106CPP0CH98 169 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 RPP30P78346 268 aaKnown RBP9.67□□□□□ -0.86
PTPRR-209ENST00000549308 PRCDQ00LT1 54 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 BAXQ07812 192 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 EBI3Q14213 229 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 PRSS8Q16651 343 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 FAM120AOSQ5T036 256 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 OR1L8Q8NGR8 309 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 OR5B3Q8NH48 314 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 OR4C12Q96R67 309 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 PLEKHA3Q9HB20 300 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 POLQO75417 2590 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 IFNA10P01566 189 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 METTL15P1P0C7V9 234 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 MAS1LP35410 378 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 VDAC2P45880 294 aaPredicted RBP9.67□□□□□ -0.86
PTPRR-209ENST00000549308 SULT1A1P50225 295 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 DYNLT3P51808 116 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 F2RL1P55085 397 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 GNB1P62873 340 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 TNXAQ16473 311 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 THNSL2Q86YJ6 484 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 CIARTQ8N365 385 aaPredicted RBP9.67□□□□□ -0.86
PTPRR-209ENST00000549308 NPBQ8NG41 125 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 OR1S2Q8NGQ3 325 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 CYTL1Q9NRR1 136 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 ITGB1BP2Q9UKP3 347 aa9.67□□□□□ -0.86
PTPRR-209ENST00000549308 GCN1Q92616 2671 aaKnown RBP9.66□□□□□ -0.86
PTPRR-209ENST00000549308 TET2Q6N021 2002 aaPredicted RBP9.66□□□□□ -0.86
PTPRR-209ENST00000549308 ABCA12Q86UK0 2595 aa9.66□□□□□ -0.86
PTPRR-209ENST00000549308 A0A1W2PN81 502 aa9.66□□□□□ -0.86
PTPRR-209ENST00000549308 NDUFA3O95167 84 aa9.66□□□□□ -0.86
PTPRR-209ENST00000549308 CHRNA7P36544 502 aa9.66□□□□□ -0.86
PTPRR-209ENST00000549308 PJVKQ0ZLH3 352 aa9.66□□□□□ -0.86
PTPRR-209ENST00000549308 MRGPRG-AS1Q2M3A8 158 aa9.66□□□□□ -0.86
PTPRR-209ENST00000549308 FBLN7Q53RD9 439 aa9.66□□□□□ -0.86
PTPRR-209ENST00000549308 C10orf55Q5SWW7 151 aa9.66□□□□□ -0.86
PTPRR-209ENST00000549308 TEX261Q6UWH6 196 aa9.66□□□□□ -0.86
PTPRR-209ENST00000549308 TMEM14EPQ6UXP3 125 aa9.66□□□□□ -0.86
PTPRR-209ENST00000549308 PPP1R27Q86WC6 154 aa9.66□□□□□ -0.86
PTPRR-209ENST00000549308 TMEM217Q8N7C4 229 aa9.66□□□□□ -0.86
PTPRR-209ENST00000549308 OR5C1Q8NGR4 320 aa9.66□□□□□ -0.86
PTPRR-209ENST00000549308 ST8SIA2Q92186 375 aa9.66□□□□□ -0.86
PTPRR-209ENST00000549308 MEGF9Q9H1U4 602 aa9.66□□□□□ -0.86
PTPRR-209ENST00000549308 U3KQ87 197 aa9.66□□□□□ -0.86
PTPRR-209ENST00000549308 NAV2Q8IVL1 2488 aa9.66□□□□□ -0.86
PTPRR-209ENST00000549308 CELSR2Q9HCU4 2923 aa9.65□□□□□ -0.86
PTPRR-209ENST00000549308 BORCS7-ASMTA0A0B4J1R7 106 aa9.65□□□□□ -0.86
PTPRR-209ENST00000549308 NCBP2LA6PVI3 153 aaKnown RBP9.65□□□□□ -0.86
PTPRR-209ENST00000549308 CFDP00746 253 aaPredicted RBP9.65□□□□□ -0.86
PTPRR-209ENST00000549308 FBP1P09467 338 aa9.65□□□□□ -0.86
PTPRR-209ENST00000549308 OR8U8P0C7N1 319 aa9.65□□□□□ -0.86
PTPRR-209ENST00000549308 TPT1P13693 172 aaKnown RBP9.65□□□□□ -0.86
PTPRR-209ENST00000549308 RPL27AP46776 148 aaKnown RBP9.65□□□□□ -0.86
PTPRR-209ENST00000549308 EIF5AP63241 154 aaKnown RBP9.65□□□□□ -0.86
PTPRR-209ENST00000549308 CLINT1Q14677 625 aa9.65□□□□□ -0.86
PTPRR-209ENST00000549308 RPL7L1Q6DKI1 246 aaKnown RBP9.65□□□□□ -0.86
PTPRR-209ENST00000549308 OR8G2PQ6IF36 304 aa9.65□□□□□ -0.86
PTPRR-209ENST00000549308 Q8N6K4 173 aa9.65□□□□□ -0.86
PTPRR-209ENST00000549308 WFDC1Q9HC57 220 aa9.65□□□□□ -0.86
PTPRR-209ENST00000549308 NDUFA4L2Q9NRX3 87 aa9.65□□□□□ -0.86
PTPRR-209ENST00000549308 C1RLQ9NZP8 487 aa9.65□□□□□ -0.86
PTPRR-209ENST00000549308 SOX21Q9Y651 276 aaPredicted RBP9.65□□□□□ -0.86
PTPRR-209ENST00000549308 C15orf62A8K5M9 175 aa9.64□□□□□ -0.87
PTPRR-209ENST00000549308 RGS13O14921 159 aa9.64□□□□□ -0.87
PTPRR-209ENST00000549308 CA2P00918 260 aa9.64□□□□□ -0.87
PTPRR-209ENST00000549308 IFNA7P01567 189 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms