RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 UPK2O00526 184 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 ST8SIA3O43173 380 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 KCNAB3O43448 404 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 KBTBD11O94819 623 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 TMEM50AO95807 157 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 IGKV1D-33P01593 117 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 IGKV1-33P01594 117 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 CRYGBP07316 175 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 CXCL2P19875 107 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 FGL1Q08830 312 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 EBI3Q14213 229 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 CCDC144NLQ6NUI1 221 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 PRSS54Q6PEW0 395 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 CLEC9AQ6UXN8 241 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 Q8N6K4 173 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 TMEM167AQ8TBQ9 72 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 EAF1Q96JC9 268 aaPredicted RBP6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 HYLS1Q96M11 299 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 MAGT1Q9H0U3 335 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 MEGF9Q9H1U4 602 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 GSX1Q9H4S2 264 aaPredicted RBP6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 PLSCR3Q9NRY6 295 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 TMEM14BQ9NUH8 114 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 HSPB7Q9UBY9 170 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 TNFSF18Q9UNG2 199 aa6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 FOXA2Q9Y261 457 aaPredicted RBP6.47□□□□□ -1.37
DEPDC4-207ENST00000549249 MDFIC2A0A1B0GVS7 189 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 CGB1A6NKQ9 187 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 HMSDA8MTL9 139 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 FAM90A26D6RGX4 464 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 SLC25A17O43808 307 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 SSSCA1O60232 199 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 NDUFA3O95167 84 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 MOSP00540 346 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 IAPPP10997 89 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 LGALS7P47929 136 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 ARHGDIBP52566 201 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 F2RL1P55085 397 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 PAX9P55771 341 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 UBE2KP61086 200 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 TNFRSF9Q07011 255 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 PSG5Q15238 335 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 LGALSLQ3ZCW2 172 aaPredicted RBP6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 SPINK9Q5DT21 86 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 TMEM65Q6PI78 240 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 THNSL2Q86YJ6 484 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 BCL6BQ8N143 479 aaPredicted RBP6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 THAP6Q8TBB0 222 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 PIFOQ8TCI5 191 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 DCUN1D4Q92564 292 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 FANCD2OSQ96PS1 177 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 RBKSQ9H477 322 aa6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.46□□□□□ -1.38
DEPDC4-207ENST00000549249 JMJD1CQ15652 2540 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 A0A1B0GW64 132 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 E7EUB6 86 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 RRHO14718 337 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 NBR2O15453 112 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 ARPC5O15511 151 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 SYNGR2O43760 224 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 CD5LO43866 347 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 CHST1O43916 411 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 SPDEFO95238 335 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 PET100P0DJ07 73 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 HKR1P10072 659 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 DYNLT3P51808 116 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 SSBP2P81877 361 aaPredicted RBP6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 PJVKQ0ZLH3 352 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 HES1Q14469 280 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 HNF4GQ14541 408 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 MMDQ15546 238 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 VMA21Q3ZAQ7 101 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 PDLIM3Q53GG5 364 aaPredicted RBP6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 C10orf55Q5SWW7 151 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 ZNF546Q86UE3 836 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 ZNF429Q86V71 674 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 TEX45Q8NA69 505 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 NPBQ8NG41 125 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 OR2T10Q8NGZ9 312 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 OR4A16Q8NH70 328 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 OR4A5Q8NH83 315 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 BSCL2Q96G97 398 aaPredicted RBP6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 TSNAXQ99598 290 aaKnown RBP6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 RNF5Q99942 180 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 AIFM2Q9BRQ8 373 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 FBXL15Q9H469 300 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 ZNF430Q9H8G1 570 aaPredicted RBP6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 NUP50Q9UKX7 468 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 TCF19Q9Y242 345 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 SIGLEC9Q9Y336 463 aa6.45□□□□□ -1.38
DEPDC4-207ENST00000549249 SVEP1Q4LDE5 3571 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 TEX50A0A1B0GTY4 177 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 IGSF23A1L1A6 192 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 FAM24AA6NFZ4 105 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 E5RGE8 158 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 H3BP45 60 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 WRBO00258 174 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 RBMXL2O75526 392 aaKnown RBP6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 SNAPC5O75971 98 aa6.44□□□□□ -1.38
DEPDC4-207ENST00000549249 OR2F2O95006 317 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 180.1 ms