RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 RRNAD1Q96FB5 475 aaKnown RBP16.6■□□□□ 0.25
CACNB3-210ENST00000548874 NOL4LQ96MY1 436 aaPredicted RBP16.6■□□□□ 0.25
CACNB3-210ENST00000548874 SEC22CQ9BRL7 303 aa16.6■□□□□ 0.25
CACNB3-210ENST00000548874 SNAPC5O75971 98 aa16.59■□□□□ 0.25
CACNB3-210ENST00000548874 ACTL6BO94805 426 aa16.59■□□□□ 0.25
CACNB3-210ENST00000548874 CNIH1O95406 144 aa16.59■□□□□ 0.25
CACNB3-210ENST00000548874 VDAC1P21796 283 aa16.59■□□□□ 0.25
CACNB3-210ENST00000548874 RGS21Q2M5E4 152 aa16.59■□□□□ 0.25
CACNB3-210ENST00000548874 C19orf54Q5BKX5 351 aa16.59■□□□□ 0.25
CACNB3-210ENST00000548874 NMSQ5H8A3 153 aa16.59■□□□□ 0.25
CACNB3-210ENST00000548874 SGMS2Q8NHU3 365 aa16.59■□□□□ 0.25
CACNB3-210ENST00000548874 COQ8AQ8NI60 647 aa16.59■□□□□ 0.25
CACNB3-210ENST00000548874 ZNF431Q8TF32 576 aaPredicted RBP16.59■□□□□ 0.25
CACNB3-210ENST00000548874 SRSF12Q8WXF0 261 aaKnown RBP16.59■□□□□ 0.25
CACNB3-210ENST00000548874 TMEM14BQ9NUH8 114 aa16.59■□□□□ 0.25
CACNB3-210ENST00000548874 LINC00527Q9UJ94 153 aa16.59■□□□□ 0.25
CACNB3-210ENST00000548874 PRNDQ9UKY0 176 aa16.59■□□□□ 0.25
CACNB3-210ENST00000548874 NSG2Q9Y328 171 aa16.59■□□□□ 0.25
CACNB3-210ENST00000548874 A0A0B4J293 547 aa16.58■□□□□ 0.24
CACNB3-210ENST00000548874 C15orf61A6NNL5 157 aa16.58■□□□□ 0.24
CACNB3-210ENST00000548874 PRAF2O60831 178 aa16.58■□□□□ 0.24
CACNB3-210ENST00000548874 MYOD1P15172 320 aa16.58■□□□□ 0.24
CACNB3-210ENST00000548874 Q6ZRM9 215 aa16.58■□□□□ 0.24
CACNB3-210ENST00000548874 RNASE11Q8TAA1 199 aaKnown RBP16.58■□□□□ 0.24
CACNB3-210ENST00000548874 GRPEL2Q8TAA5 225 aa16.58■□□□□ 0.24
CACNB3-210ENST00000548874 CHPT1Q8WUD6 406 aa16.58■□□□□ 0.24
CACNB3-210ENST00000548874 GPR146Q96CH1 333 aa16.58■□□□□ 0.24
CACNB3-210ENST00000548874 FAM103A1Q9BTL3 118 aaKnown RBP16.58■□□□□ 0.24
CACNB3-210ENST00000548874 FOXA2Q9Y261 457 aaPredicted RBP16.58■□□□□ 0.24
CACNB3-210ENST00000548874 A0A1B0GW64 132 aa16.57■□□□□ 0.24
CACNB3-210ENST00000548874 CGB1A6NKQ9 187 aa16.57■□□□□ 0.24
CACNB3-210ENST00000548874 DBX1A6NMT0 343 aa16.57■□□□□ 0.24
CACNB3-210ENST00000548874 E7EUB6 86 aa16.57■□□□□ 0.24
CACNB3-210ENST00000548874 RPL27AP46776 148 aaKnown RBP16.57■□□□□ 0.24
CACNB3-210ENST00000548874 OR2B8PP59922 312 aa16.57■□□□□ 0.24
CACNB3-210ENST00000548874 CFHR3Q02985 330 aa16.57■□□□□ 0.24
CACNB3-210ENST00000548874 KLHDC1Q8N7A1 406 aa16.57■□□□□ 0.24
CACNB3-210ENST00000548874 OR4A16Q8NH70 328 aa16.57■□□□□ 0.24
CACNB3-210ENST00000548874 ABHD5Q8WTS1 349 aa16.57■□□□□ 0.24
CACNB3-210ENST00000548874 COMMD5Q9GZQ3 224 aa16.57■□□□□ 0.24
CACNB3-210ENST00000548874 FKBP11Q9NYL4 201 aa16.57■□□□□ 0.24
CACNB3-210ENST00000548874 TRAV41A0A0B4J266 112 aa16.56■□□□□ 0.24
CACNB3-210ENST00000548874 G3V318 75 aa16.56■□□□□ 0.24
CACNB3-210ENST00000548874 OXA1LQ15070 435 aa16.56■□□□□ 0.24
CACNB3-210ENST00000548874 AARDQ4LEZ3 155 aa16.56■□□□□ 0.24
CACNB3-210ENST00000548874 ASPHD1Q5U4P2 390 aa16.56■□□□□ 0.24
CACNB3-210ENST00000548874 ZNF429Q86V71 674 aa16.56■□□□□ 0.24
CACNB3-210ENST00000548874 PHB2Q99623 299 aa16.56■□□□□ 0.24
CACNB3-210ENST00000548874 MDFIQ99750 246 aa16.56■□□□□ 0.24
CACNB3-210ENST00000548874 ZNF257Q9Y2Q1 563 aa16.56■□□□□ 0.24
CACNB3-210ENST00000548874 TMED3Q9Y3Q3 217 aa16.56■□□□□ 0.24
CACNB3-210ENST00000548874 WSB1Q9Y6I7 421 aa16.56■□□□□ 0.24
CACNB3-210ENST00000548874 TEX50A0A1B0GTY4 177 aa16.55■□□□□ 0.24
CACNB3-210ENST00000548874 MSGN1A6NI15 193 aa16.55■□□□□ 0.24
CACNB3-210ENST00000548874 TEX22C9J3V5 150 aa16.55■□□□□ 0.24
CACNB3-210ENST00000548874 DHFRP00374 187 aa16.55■□□□□ 0.24
CACNB3-210ENST00000548874 PPIFP30405 207 aaKnown RBP16.55■□□□□ 0.24
CACNB3-210ENST00000548874 AKIRIN2Q53H80 203 aa16.55■□□□□ 0.24
CACNB3-210ENST00000548874 MINDY2Q8NBR6 621 aa16.55■□□□□ 0.24
CACNB3-210ENST00000548874 LFNGQ8NES3 379 aa16.55■□□□□ 0.24
CACNB3-210ENST00000548874 OR1L8Q8NGR8 309 aa16.55■□□□□ 0.24
CACNB3-210ENST00000548874 OR5B3Q8NH48 314 aa16.55■□□□□ 0.24
CACNB3-210ENST00000548874 WFDC12Q8WWY7 111 aa16.55■□□□□ 0.24
CACNB3-210ENST00000548874 TMEM68Q96MH6 324 aa16.55■□□□□ 0.24
CACNB3-210ENST00000548874 SPIN2AQ99865 258 aa16.55■□□□□ 0.24
CACNB3-210ENST00000548874 SPIN2BQ9BPZ2 258 aa16.55■□□□□ 0.24
CACNB3-210ENST00000548874 GON7Q9BXV9 100 aa16.55■□□□□ 0.24
CACNB3-210ENST00000548874 CACNG5Q9UF02 275 aa16.55■□□□□ 0.24
CACNB3-210ENST00000548874 OR51B2Q9Y5P1 312 aa16.55■□□□□ 0.24
CACNB3-210ENST00000548874 PSMB11A5LHX3 300 aa16.54■□□□□ 0.24
CACNB3-210ENST00000548874 SNRPGP15A8MWD9 76 aa16.54■□□□□ 0.24
CACNB3-210ENST00000548874 OPN1MWP04001 364 aa16.54■□□□□ 0.24
CACNB3-210ENST00000548874 OPN1MW2P0DN77 364 aa16.54■□□□□ 0.24
CACNB3-210ENST00000548874 OPN1MW3P0DN78 364 aa16.54■□□□□ 0.24
CACNB3-210ENST00000548874 TMEM267Q0VDI3 215 aaPredicted RBP16.54■□□□□ 0.24
CACNB3-210ENST00000548874 ECSCRQ19T08 205 aa16.54■□□□□ 0.24
CACNB3-210ENST00000548874 C12orf45Q8N5I9 185 aaPredicted RBP16.54■□□□□ 0.24
CACNB3-210ENST00000548874 QTRT1Q9BXR0 403 aaKnown RBP16.54■□□□□ 0.24
CACNB3-210ENST00000548874 GPN1Q9HCN4 374 aaPredicted RBP16.54■□□□□ 0.24
CACNB3-210ENST00000548874 NDUFA4L2Q9NRX3 87 aa16.54■□□□□ 0.24
CACNB3-210ENST00000548874 COA4Q9NYJ1 87 aa16.54■□□□□ 0.24
CACNB3-210ENST00000548874 HAX1O00165 279 aa16.53■□□□□ 0.24
CACNB3-210ENST00000548874 ADAP1O75689 374 aa16.53■□□□□ 0.24
CACNB3-210ENST00000548874 HOXB5P09067 269 aa16.53■□□□□ 0.24
CACNB3-210ENST00000548874 SULT1A3P0DMM9 295 aa16.53■□□□□ 0.24
CACNB3-210ENST00000548874 SULT1A4P0DMN0 295 aa16.53■□□□□ 0.24
CACNB3-210ENST00000548874 SLC25A6P12236 298 aa16.53■□□□□ 0.24
CACNB3-210ENST00000548874 KRTAP10-3P60369 221 aa16.53■□□□□ 0.24
CACNB3-210ENST00000548874 HSPE1P61604 102 aaKnown RBP16.53■□□□□ 0.24
CACNB3-210ENST00000548874 GGNBP1Q5YKI7 109 aa16.53■□□□□ 0.24
CACNB3-210ENST00000548874 THOC7Q6I9Y2 204 aaKnown RBP16.53■□□□□ 0.24
CACNB3-210ENST00000548874 UNQ5815/PRO19632Q6UWF5 114 aa16.53■□□□□ 0.24
CACNB3-210ENST00000548874 C10orf99Q6UWK7 81 aa16.53■□□□□ 0.24
CACNB3-210ENST00000548874 CENPVQ7Z7K6 275 aaPredicted RBP16.53■□□□□ 0.24
CACNB3-210ENST00000548874 FYTTD1Q96QD9 318 aaKnown RBP16.53■□□□□ 0.24
CACNB3-210ENST00000548874 SRSF8Q9BRL6 282 aaKnown RBP16.53■□□□□ 0.24
CACNB3-210ENST00000548874 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.53■□□□□ 0.24
CACNB3-210ENST00000548874 TET2Q6N021 2002 aaPredicted RBP16.52■□□□□ 0.24
CACNB3-210ENST00000548874 A0A1B0GU03 582 aa16.52■□□□□ 0.24
CACNB3-210ENST00000548874 C7orf66A4D0T2 115 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms