RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 CCDC153Q494R4 210 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 ZBED5Q49AG3 693 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 ZNF684Q5T5D7 378 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 LIPKQ5VXJ0 399 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 DLEU7Q6UYE1 221 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 HACD2Q6Y1H2 254 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 SLC25A48Q6ZT89 311 aaKnown RBP1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 NRMQ8IXM6 262 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 C8orf31Q8N9H6 132 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 OR10A7Q8NGE5 316 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 FAM81AQ8TBF8 368 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 ACMSDQ8TDX5 336 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 CEP19Q96LK0 163 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 PPP1R36Q96LQ0 422 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 GPX7Q96SL4 187 aaPredicted RBP1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 NMNAT3Q96T66 252 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 SORT1Q99523 831 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 PKIBQ9C010 78 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 POLR2J2Q9GZM3 115 aaKnown RBP1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 POLR2J3Q9H1A7 115 aaKnown RBP1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 FBXL15Q9H469 300 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 REEP1Q9H902 201 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 RPRD1BQ9NQG5 326 aaKnown RBP1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 DCAF13Q9NV06 445 aaKnown RBP1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 ZNF586Q9NXT0 402 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 MTCH1Q9NZJ7 389 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 DNAJC27Q9NZQ0 273 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 NDUFA13Q9P0J0 144 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 SAMD4AQ9UPU9 718 aaKnown RBP1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 IER3IP1Q9Y5U9 82 aa1.4□□□□□ -2.19
DEPDC4-204ENST00000547823 MUC17Q685J3 4493 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 A0A087WUU8 490 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 MEIKINA0A087WXM9 373 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 A0A0U1RRA0 63 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 SMIM23A6NLE4 172 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 SLC31A2O15432 143 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 LANCL1O43813 399 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 MRPS14O60783 128 aaKnown RBP1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 ZNF254O75437 659 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 OR2H2O95918 312 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 CA2P00918 260 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 NRASP01111 189 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 IGLV2-23P01705 113 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 REG1AP05451 166 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 ABHD2P08910 425 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 SPART-AS1P0CW21 52 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 C8orf88P0DMB2 117 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 CALCBP10092 127 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 HTN3P15516 51 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 HIST1H1CP16403 213 aaKnown RBP1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 PRKACAP17612 351 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 PYCR1P32322 319 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 SSTR5P35346 364 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 CMC4P56277 68 aaPredicted RBP1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 RIPPLY1Q0D2K3 151 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 PPP1R8Q12972 351 aaKnown RBP1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 EXOSC2Q13868 293 aaKnown RBP1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 ATXN7L3Q14CW9 347 aaPredicted RBP1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 PTGES3Q15185 160 aaKnown RBP1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 PLGLAQ15195 96 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 AGKQ53H12 422 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 OR2B11Q5JQS5 317 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 TEX30Q5JUR7 227 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 TMEM69Q5SWH9 247 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 CLVS2Q5SYC1 327 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 MEDAGQ5VYS4 303 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 ZNF562Q6V9R5 426 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 Q6ZSA8 131 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 SSX7Q7RTT5 188 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 GPHB5Q86YW7 130 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 ERI1Q8IV48 349 aaKnown RBP1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 MSRB3Q8IXL7 192 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 Q8IYB0 196 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 CNPY4Q8N129 248 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 FAM58AQ8N1B3 248 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 ZNF565Q8N9K5 539 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 BBS1Q8NFJ9 593 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 OR10H4Q8NGA5 316 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 OR52M1Q8NGK5 317 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 OR4K13Q8NH42 304 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 GRPEL2Q8TAA5 225 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 RNF133Q8WVZ7 376 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 LZICQ8WZA0 190 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 GTF2H4Q92759 462 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 FAM104AQ969W3 186 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 MARC2Q969Z3 335 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 TAMM41Q96BW9 452 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 CLCC1Q96S66 551 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 MRPL20Q9BYC9 149 aaKnown RBP1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 CHST5Q9GZS9 411 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 PBOV1Q9GZY1 135 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 MAGT1Q9H0U3 335 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 NCOR1P1Q9H4R4 102 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 ROPN1Q9HAT0 212 aaPredicted RBP1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 EXOSC4Q9NPD3 245 aaKnown RBP1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 SLC2A9Q9NRM0 540 aa1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 RBFOX1Q9NWB1 397 aaKnown RBP1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 ARGLU1Q9NWB6 273 aaPredicted RBP1.39□□□□□ -2.19
DEPDC4-204ENST00000547823 SLC25A37Q9NYZ2 338 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms