RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 RPL19P84098 196 aaKnown RBP2.74□□□□□ -1.97
SCAF11-210ENST00000547654 PMAIP1Q13794 54 aa2.74□□□□□ -1.97
SCAF11-210ENST00000547654 ACOT6Q3I5F7 207 aaPredicted RBP2.74□□□□□ -1.97
SCAF11-210ENST00000547654 TIFABQ6ZNK6 161 aa2.74□□□□□ -1.97
SCAF11-210ENST00000547654 YIPF7Q8N8F6 280 aa2.74□□□□□ -1.97
SCAF11-210ENST00000547654 FER1L6-AS1Q8NA97 138 aa2.74□□□□□ -1.97
SCAF11-210ENST00000547654 OR10X1Q8NGY0 326 aa2.74□□□□□ -1.97
SCAF11-210ENST00000547654 ITLN2Q8WWU7 325 aaPredicted RBP2.74□□□□□ -1.97
SCAF11-210ENST00000547654 SIGMAR1Q99720 223 aa2.74□□□□□ -1.97
SCAF11-210ENST00000547654 PRRT1Q99946 306 aa2.74□□□□□ -1.97
SCAF11-210ENST00000547654 KIFC1Q9BW19 673 aa2.74□□□□□ -1.97
SCAF11-210ENST00000547654 MED28Q9H204 178 aa2.74□□□□□ -1.97
SCAF11-210ENST00000547654 C11orf49Q9H6J7 331 aa2.74□□□□□ -1.97
SCAF11-210ENST00000547654 ZNF430Q9H8G1 570 aaPredicted RBP2.74□□□□□ -1.97
SCAF11-210ENST00000547654 MRPL40Q9NQ50 206 aaKnown RBP2.74□□□□□ -1.97
SCAF11-210ENST00000547654 INIPQ9NRY2 104 aa2.74□□□□□ -1.97
SCAF11-210ENST00000547654 KCNIP2Q9NS61 270 aa2.74□□□□□ -1.97
SCAF11-210ENST00000547654 PRELID3BQ9Y3B1 194 aa2.74□□□□□ -1.97
SCAF11-210ENST00000547654 PCYT1BQ9Y5K3 369 aaPredicted RBP2.74□□□□□ -1.97
SCAF11-210ENST00000547654 VWA8A3KMH1 1905 aa2.74□□□□□ -1.97
SCAF11-210ENST00000547654 ZNF532Q9HCE3 1301 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 ZNF236Q9UL36 1845 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 A0A087WUJ7 227 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 EEF1E1-BLOC1S5C9J1V9 151 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 PANO1I0J062 215 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 EEF1E1O43324 174 aaKnown RBP2.73□□□□□ -1.97
SCAF11-210ENST00000547654 MED6O75586 246 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 CCNKO75909 580 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 HAND1O96004 215 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 LTAP01374 205 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 GUSBP08236 651 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 OR5AC1P0C628 307 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 PTHLHP12272 177 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 GABRA3P34903 492 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 PPP1CCP36873 323 aaKnown RBP2.73□□□□□ -1.97
SCAF11-210ENST00000547654 TGFBR1P36897 503 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 PSME3P61289 254 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 POLR2GP62487 172 aaKnown RBP eCLIP2.73□□□□□ -1.97
SCAF11-210ENST00000547654 KRR1Q13601 381 aaKnown RBP2.73□□□□□ -1.97
SCAF11-210ENST00000547654 MMDQ15546 238 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 LIN52Q52LA3 116 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 IGFL2Q6UWQ7 119 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 ZNF550Q7Z398 422 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 TMEM144Q7Z5S9 345 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 AMN1Q8IY45 258 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 MIR7-3HGQ8N6C7 128 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 Q8N7P7 452 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 OR4A5Q8NH83 315 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 CMBLQ96DG6 245 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 OR2V2Q96R30 315 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 CMSS1Q9BQ75 279 aaKnown RBP2.73□□□□□ -1.97
SCAF11-210ENST00000547654 C1orf50Q9BV19 199 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 DCSTAMPQ9H295 470 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 ZNF391Q9UJN7 358 aa2.73□□□□□ -1.97
SCAF11-210ENST00000547654 EDC4Q6P2E9 1401 aaKnown RBP2.73□□□□□ -1.97
SCAF11-210ENST00000547654 SIP14410 1827 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 TICRRQ7Z2Z1 1910 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 IGHV3-21A0A0B4J1V1 117 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 IGHV3-43A0A0B4J1X8 118 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 OR5H14A6NHG9 310 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 GPR75O95800 540 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 IL4P05112 153 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 CD5P06127 495 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 CISD3P0C7P0 127 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 LINC00869P0C866 280 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 CA7P43166 264 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 MAP2K4P45985 399 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 HIST1H3AP68431 136 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 H3F3AP84243 136 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 IFITM2Q01629 132 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 CDK10Q15131 360 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 SP6Q3SY56 376 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 C2orf83Q53S99 150 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 FAM201AQ5SY85 155 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 C1orf194Q5T5A4 169 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 HES3Q5TGS1 186 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 Q5W150 140 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 SBSNQ6UWP8 590 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 ZNF567Q8N184 647 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 TMEM86BQ8N661 226 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 MCFD2Q8NI22 146 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 NEK7Q8TDX7 302 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 FAM172AQ8WUF8 416 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 KCTD4Q8WVF5 259 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 RBPMSQ93062 196 aaKnown RBP2.72□□□□□ -1.97
SCAF11-210ENST00000547654 YIPF5Q969M3 257 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 BORCS7Q96B45 105 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 RMI2Q96E14 147 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 RNF5Q99942 180 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 FAM60AQ9NP50 221 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 WASHC3Q9Y3C0 194 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 POLQO75417 2590 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 LOC285556D6RIA3 1793 aa2.72□□□□□ -1.97
SCAF11-210ENST00000547654 ZFHX3Q15911 3703 aa2.71□□□□□ -1.97
SCAF11-210ENST00000547654 C4orf51C9J302 202 aa2.71□□□□□ -1.98
SCAF11-210ENST00000547654 MT-CO2P00403 227 aa2.71□□□□□ -1.98
SCAF11-210ENST00000547654 GYPCP04921 128 aa2.71□□□□□ -1.98
SCAF11-210ENST00000547654 CST2P09228 141 aa2.71□□□□□ -1.98
SCAF11-210ENST00000547654 NTF3P20783 257 aa2.71□□□□□ -1.98
SCAF11-210ENST00000547654 NPY1RP25929 384 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms