RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 TRAV41A0A0B4J266 112 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 RAB25P57735 213 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 SLC35B1P78383 322 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 DCTN2Q13561 401 aaKnown RBP18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 ECSCRQ19T08 205 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 C10orf55Q5SWW7 151 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 LYG2Q86SG7 212 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 FAM219AQ8IW50 185 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 C3orf56Q8N813 242 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 LFNGQ8NES3 379 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 WIPF2Q8TF74 440 aaPredicted RBP18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 COMMD5Q9GZQ3 224 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 NSG2Q9Y328 171 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 MSGN1A6NI15 193 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 G3V318 75 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 P0C879 139 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 RPL27AP46776 148 aaKnown RBP18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 MECP2P51608 486 aaKnown RBP18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 ANKRD55Q3KP44 614 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 AKIRIN2Q53H80 203 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 PLET1Q6UQ28 207 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 ZNF329Q86UD4 541 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 SLC35G3Q8N808 338 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 OR5AU1Q8NGC0 362 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 OR4A16Q8NH70 328 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 PHB2Q99623 299 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 SPIN2AQ99865 258 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 SPIN2BQ9BPZ2 258 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 PRNDQ9UKY0 176 aa18.21■□□□□ 0.51
SMARCD1-203ENST00000547247 A0A0B4J2A0 478 aa18.2■□□□□ 0.5
SMARCD1-203ENST00000547247 UNQ5815/PRO19632Q6UWF5 114 aa18.2■□□□□ 0.5
SMARCD1-203ENST00000547247 LRTM2Q8N967 370 aa18.2■□□□□ 0.5
SMARCD1-203ENST00000547247 LSM10Q969L4 123 aaKnown RBP18.2■□□□□ 0.5
SMARCD1-203ENST00000547247 FKBP11Q9NYL4 201 aa18.2■□□□□ 0.5
SMARCD1-203ENST00000547247 SHPKQ9UHJ6 478 aa18.2■□□□□ 0.5
SMARCD1-203ENST00000547247 STAB1Q9NY15 2570 aa18.2■□□□□ 0.5
SMARCD1-203ENST00000547247 A0A0G2JRQ6 117 aa18.19■□□□□ 0.5
SMARCD1-203ENST00000547247 C15orf61A6NNL5 157 aa18.19■□□□□ 0.5
SMARCD1-203ENST00000547247 RBMXL2O75526 392 aaKnown RBP18.19■□□□□ 0.5
SMARCD1-203ENST00000547247 DUS4LO95620 317 aaKnown RBP18.19■□□□□ 0.5
SMARCD1-203ENST00000547247 OPN1MWP04001 364 aa18.19■□□□□ 0.5
SMARCD1-203ENST00000547247 OPN1MW2P0DN77 364 aa18.19■□□□□ 0.5
SMARCD1-203ENST00000547247 OPN1MW3P0DN78 364 aa18.19■□□□□ 0.5
SMARCD1-203ENST00000547247 MYOD1P15172 320 aa18.19■□□□□ 0.5
SMARCD1-203ENST00000547247 OR2B8PP59922 312 aa18.19■□□□□ 0.5
SMARCD1-203ENST00000547247 IZUMO4Q1ZYL8 232 aa18.19■□□□□ 0.5
SMARCD1-203ENST00000547247 C10orf99Q6UWK7 81 aa18.19■□□□□ 0.5
SMARCD1-203ENST00000547247 LYZL2Q7Z4W2 148 aa18.19■□□□□ 0.5
SMARCD1-203ENST00000547247 TMEM68Q96MH6 324 aa18.19■□□□□ 0.5
SMARCD1-203ENST00000547247 ZNF747Q9BV97 191 aa18.19■□□□□ 0.5
SMARCD1-203ENST00000547247 PPIFP30405 207 aaKnown RBP18.18■□□□□ 0.5
SMARCD1-203ENST00000547247 KRTAP10-3P60369 221 aa18.18■□□□□ 0.5
SMARCD1-203ENST00000547247 CFHR3Q02985 330 aa18.18■□□□□ 0.5
SMARCD1-203ENST00000547247 C19orf54Q5BKX5 351 aa18.18■□□□□ 0.5
SMARCD1-203ENST00000547247 FYTTD1Q96QD9 318 aaKnown RBP18.18■□□□□ 0.5
SMARCD1-203ENST00000547247 TMEM14BQ9NUH8 114 aa18.18■□□□□ 0.5
SMARCD1-203ENST00000547247 OR51B2Q9Y5P1 312 aa18.18■□□□□ 0.5
SMARCD1-203ENST00000547247 DUXBA0A1W2PPF3 345 aa18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 E7EUB6 86 aa18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 COMMD1Q8N668 190 aa18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 MINDY2Q8NBR6 621 aa18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 OR4X2Q8NGF9 303 aa18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 OR1L8Q8NGR8 309 aa18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 COQ8AQ8NI60 647 aa18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 FOXA2Q9Y261 457 aaPredicted RBP18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 TENM1Q9UKZ4 2725 aa18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 A0A0B4J293 547 aa18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 TEX50A0A1B0GTY4 177 aa18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 A0A1W2PN81 502 aa18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 PTTG1O95997 202 aa18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 CHRNA7P36544 502 aa18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 SRSF4Q08170 494 aaKnown RBP18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 TEX38Q6PEX7 206 aa18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 OR52B4Q8NGK2 314 aa18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 OR5B3Q8NH48 314 aa18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 GPR146Q96CH1 333 aa18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 MARVELD1Q9BSK0 173 aa18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 QTRT1Q9BXR0 403 aaKnown RBP18.17■□□□□ 0.5
SMARCD1-203ENST00000547247 DBX1A6NMT0 343 aa18.16■□□□□ 0.5
SMARCD1-203ENST00000547247 INMT-MINDY4F8WBC2 141 aa18.16■□□□□ 0.5
SMARCD1-203ENST00000547247 FBXO24O75426 580 aa18.16■□□□□ 0.5
SMARCD1-203ENST00000547247 IGHG4P01861 327 aa18.16■□□□□ 0.5
SMARCD1-203ENST00000547247 APELAP0DMC3 54 aa18.16■□□□□ 0.5
SMARCD1-203ENST00000547247 ASPHD1Q5U4P2 390 aa18.16■□□□□ 0.5
SMARCD1-203ENST00000547247 ZNF429Q86V71 674 aa18.16■□□□□ 0.5
SMARCD1-203ENST00000547247 C11orf44Q8N8P7 122 aa18.16■□□□□ 0.5
SMARCD1-203ENST00000547247 HMX3A6NHT5 357 aa18.15■□□□□ 0.5
SMARCD1-203ENST00000547247 TEX22C9J3V5 150 aa18.15■□□□□ 0.5
SMARCD1-203ENST00000547247 IL5P05113 134 aa18.15■□□□□ 0.5
SMARCD1-203ENST00000547247 NMSQ5H8A3 153 aa18.15■□□□□ 0.5
SMARCD1-203ENST00000547247 THOC7Q6I9Y2 204 aaKnown RBP18.15■□□□□ 0.5
SMARCD1-203ENST00000547247 Q6ZRM9 215 aa18.15■□□□□ 0.5
SMARCD1-203ENST00000547247 OR5M8Q8NGP6 311 aa18.15■□□□□ 0.5
SMARCD1-203ENST00000547247 MITD1Q8WV92 249 aa18.15■□□□□ 0.5
SMARCD1-203ENST00000547247 CITED1Q99966 193 aa18.15■□□□□ 0.5
SMARCD1-203ENST00000547247 SEC22CQ9BRL7 303 aa18.15■□□□□ 0.5
SMARCD1-203ENST00000547247 ZNF257Q9Y2Q1 563 aa18.15■□□□□ 0.5
SMARCD1-203ENST00000547247 TMED3Q9Y3Q3 217 aa18.15■□□□□ 0.5
SMARCD1-203ENST00000547247 A0A1B0GW64 132 aa18.14■□□□□ 0.49
SMARCD1-203ENST00000547247 CGB1A6NKQ9 187 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms