RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 A0A1B0GW64 132 aa11.34□□□□□ -0.59
CCDC38-205ENST00000546947 PRH1P02810 166 aa11.34□□□□□ -0.59
CCDC38-205ENST00000546947 IFNA6P05013 189 aa11.34□□□□□ -0.59
CCDC38-205ENST00000546947 TBPP20226 339 aa11.34□□□□□ -0.59
CCDC38-205ENST00000546947 ATP5G2Q06055 141 aa11.34□□□□□ -0.59
CCDC38-205ENST00000546947 KLF5Q13887 457 aaPredicted RBP11.34□□□□□ -0.59
CCDC38-205ENST00000546947 RNASE12Q5GAN4 147 aaKnown RBP11.34□□□□□ -0.59
CCDC38-205ENST00000546947 RNASE10Q5GAN6 216 aaKnown RBP11.34□□□□□ -0.59
CCDC38-205ENST00000546947 FAM209BQ5JX69 171 aa11.34□□□□□ -0.59
CCDC38-205ENST00000546947 LAX1Q8IWV1 398 aa11.34□□□□□ -0.59
CCDC38-205ENST00000546947 SLC38A6Q8IZM9 456 aa11.34□□□□□ -0.59
CCDC38-205ENST00000546947 CADM3Q8N126 398 aa11.34□□□□□ -0.59
CCDC38-205ENST00000546947 NECAP1Q8NC96 275 aa11.34□□□□□ -0.59
CCDC38-205ENST00000546947 OR6Q1Q8NGQ2 317 aa11.34□□□□□ -0.59
CCDC38-205ENST00000546947 DYNC2LI1Q8TCX1 351 aa11.34□□□□□ -0.59
CCDC38-205ENST00000546947 FCAMRQ8WWV6 532 aa11.34□□□□□ -0.59
CCDC38-205ENST00000546947 PRR25Q96S07 402 aa11.34□□□□□ -0.59
CCDC38-205ENST00000546947 ABHD1Q96SE0 405 aa11.34□□□□□ -0.59
CCDC38-205ENST00000546947 TMEM140Q9NV12 185 aa11.34□□□□□ -0.59
CCDC38-205ENST00000546947 CGB1A6NKQ9 187 aa11.33□□□□□ -0.6
CCDC38-205ENST00000546947 MARCH11A6NNE9 402 aa11.33□□□□□ -0.6
CCDC38-205ENST00000546947 GABARAPH6UMI1 98 aa11.33□□□□□ -0.6
CCDC38-205ENST00000546947 M0QYG6 137 aa11.33□□□□□ -0.6
CCDC38-205ENST00000546947 CTDSP2O14595 271 aa11.33□□□□□ -0.6
CCDC38-205ENST00000546947 DHFRP00374 187 aa11.33□□□□□ -0.6
CCDC38-205ENST00000546947 CTRB1P17538 263 aa11.33□□□□□ -0.6
CCDC38-205ENST00000546947 PSMB6P28072 239 aa11.33□□□□□ -0.6
CCDC38-205ENST00000546947 LPAR6P43657 344 aa11.33□□□□□ -0.6
CCDC38-205ENST00000546947 MRPS10P82664 201 aaKnown RBP11.33□□□□□ -0.6
CCDC38-205ENST00000546947 EXOSC2Q13868 293 aaKnown RBP11.33□□□□□ -0.6
CCDC38-205ENST00000546947 KLK9Q2XQG4 91 aa11.33□□□□□ -0.6
CCDC38-205ENST00000546947 PHLDA2Q53GA4 152 aa11.33□□□□□ -0.6
CCDC38-205ENST00000546947 CTRB2Q6GPI1 263 aa11.33□□□□□ -0.6
CCDC38-205ENST00000546947 ARRDC1Q8N5I2 433 aa11.33□□□□□ -0.6
CCDC38-205ENST00000546947 OR4C12Q96R67 309 aa11.33□□□□□ -0.6
CCDC38-205ENST00000546947 SRSF8Q9BRL6 282 aaKnown RBP11.33□□□□□ -0.6
CCDC38-205ENST00000546947 COMMD5Q9GZQ3 224 aa11.33□□□□□ -0.6
CCDC38-205ENST00000546947 RABL2AQ9UBK7 228 aaPredicted RBP11.33□□□□□ -0.6
CCDC38-205ENST00000546947 KLK9Q9UKQ9 250 aa11.33□□□□□ -0.6
CCDC38-205ENST00000546947 RABL2BQ9UNT1 228 aa11.33□□□□□ -0.6
CCDC38-205ENST00000546947 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.32□□□□□ -0.6
CCDC38-205ENST00000546947 TRAV3A0A0B4J244 114 aa11.32□□□□□ -0.6
CCDC38-205ENST00000546947 OR2J3O76001 311 aa11.32□□□□□ -0.6
CCDC38-205ENST00000546947 LY86O95711 162 aa11.32□□□□□ -0.6
CCDC38-205ENST00000546947 TRBV12-3P01733 135 aa11.32□□□□□ -0.6
CCDC38-205ENST00000546947 CD3DP04234 171 aa11.32□□□□□ -0.6
CCDC38-205ENST00000546947 MYOD1P15172 320 aa11.32□□□□□ -0.6
CCDC38-205ENST00000546947 AREGP15514 252 aa11.32□□□□□ -0.6
CCDC38-205ENST00000546947 HIST1H1BP16401 226 aaKnown RBP11.32□□□□□ -0.6
CCDC38-205ENST00000546947 TAS2R19P59542 299 aa11.32□□□□□ -0.6
CCDC38-205ENST00000546947 OR2B8PP59922 312 aa11.32□□□□□ -0.6
CCDC38-205ENST00000546947 SSBP1Q04837 148 aaKnown RBP11.32□□□□□ -0.6
CCDC38-205ENST00000546947 TATDN3Q17R31 274 aa11.32□□□□□ -0.6
CCDC38-205ENST00000546947 RPEL1Q2QD12 228 aa11.32□□□□□ -0.6
CCDC38-205ENST00000546947 ZNF585BQ52M93 769 aa11.32□□□□□ -0.6
CCDC38-205ENST00000546947 THOC7Q6I9Y2 204 aaKnown RBP11.32□□□□□ -0.6
CCDC38-205ENST00000546947 TBC1D26Q86UD7 250 aa11.32□□□□□ -0.6
CCDC38-205ENST00000546947 LHFPL1Q86WI0 220 aa11.32□□□□□ -0.6
CCDC38-205ENST00000546947 TMEM229BQ8NBD8 167 aa11.32□□□□□ -0.6
CCDC38-205ENST00000546947 ZNF486Q96H40 463 aaPredicted RBP11.32□□□□□ -0.6
CCDC38-205ENST00000546947 B9D2Q9BPU9 175 aa11.32□□□□□ -0.6
CCDC38-205ENST00000546947 PLA2G2EQ9NZK7 142 aa11.32□□□□□ -0.6
CCDC38-205ENST00000546947 LSM4Q9Y4Z0 139 aaKnown RBP11.32□□□□□ -0.6
CCDC38-205ENST00000546947 CD74P04233 296 aa11.31□□□□□ -0.6
CCDC38-205ENST00000546947 PTBP1P26599 531 aaKnown RBP eCLIP11.31□□□□□ -0.6
CCDC38-205ENST00000546947 RND3P61587 244 aa11.31□□□□□ -0.6
CCDC38-205ENST00000546947 C15orf32Q32M92 178 aa11.31□□□□□ -0.6
CCDC38-205ENST00000546947 OR9G4Q8NGQ1 327 aa11.31□□□□□ -0.6
CCDC38-205ENST00000546947 ISOC1Q96CN7 298 aa11.31□□□□□ -0.6
CCDC38-205ENST00000546947 FANCD2OSQ96PS1 177 aa11.31□□□□□ -0.6
CCDC38-205ENST00000546947 QTRT1Q9BXR0 403 aaKnown RBP11.31□□□□□ -0.6
CCDC38-205ENST00000546947 FBXL7Q9UJT9 491 aa11.31□□□□□ -0.6
CCDC38-205ENST00000546947 H3BMQ9 156 aa11.3□□□□□ -0.6
CCDC38-205ENST00000546947 CTDSPLO15194 276 aa11.3□□□□□ -0.6
CCDC38-205ENST00000546947 KRASP01116 189 aa11.3□□□□□ -0.6
CCDC38-205ENST00000546947 DEFA4P12838 97 aa11.3□□□□□ -0.6
CCDC38-205ENST00000546947 PGAM2P15259 253 aa11.3□□□□□ -0.6
CCDC38-205ENST00000546947 RPA2P15927 270 aa11.3□□□□□ -0.6
CCDC38-205ENST00000546947 SPNP16150 400 aa11.3□□□□□ -0.6
CCDC38-205ENST00000546947 G6PCP35575 357 aa11.3□□□□□ -0.6
CCDC38-205ENST00000546947 SYNJ2BPP57105 145 aa11.3□□□□□ -0.6
CCDC38-205ENST00000546947 CD69Q07108 199 aa11.3□□□□□ -0.6
CCDC38-205ENST00000546947 C19orf35Q6ZS72 473 aa11.3□□□□□ -0.6
CCDC38-205ENST00000546947 HSD17B13Q7Z5P4 300 aaPredicted RBP11.3□□□□□ -0.6
CCDC38-205ENST00000546947 OR1L8Q8NGR8 309 aa11.3□□□□□ -0.6
CCDC38-205ENST00000546947 DIRAS2Q96HU8 199 aa11.3□□□□□ -0.6
CCDC38-205ENST00000546947 TSC22D3Q99576 134 aa11.3□□□□□ -0.6
CCDC38-205ENST00000546947 IGLV11-55A0A075B6I3 123 aa11.29□□□□□ -0.6
CCDC38-205ENST00000546947 IGLC7A0M8Q6 106 aa11.29□□□□□ -0.6
CCDC38-205ENST00000546947 BMPR1BO00238 502 aa11.29□□□□□ -0.6
CCDC38-205ENST00000546947 SNAPC5O75971 98 aa11.29□□□□□ -0.6
CCDC38-205ENST00000546947 RAB3DO95716 219 aa11.29□□□□□ -0.6
CCDC38-205ENST00000546947 IGLV1-51P01701 117 aa11.29□□□□□ -0.6
CCDC38-205ENST00000546947 REG1AP05451 166 aa11.29□□□□□ -0.6
CCDC38-205ENST00000546947 TRAPPC2P0DI81 140 aa11.29□□□□□ -0.6
CCDC38-205ENST00000546947 TRAPPC2BP0DI82 140 aa11.29□□□□□ -0.6
CCDC38-205ENST00000546947 GP9P14770 177 aa11.29□□□□□ -0.6
CCDC38-205ENST00000546947 IL18Q14116 193 aa11.29□□□□□ -0.6
CCDC38-205ENST00000546947 STEAP1BQ6NZ63 245 aa11.29□□□□□ -0.6
CCDC38-205ENST00000546947 SMIM4Q8WVI0 70 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms