RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 ASPHD1Q5U4P2 390 aa13.12□□□□□ -0.31
CCDC38-203ENST00000546803 TREML4Q6UXN2 200 aa13.12□□□□□ -0.31
CCDC38-203ENST00000546803 ZNF695Q8IW36 515 aa13.12□□□□□ -0.31
CCDC38-203ENST00000546803 SGPP2Q8IWX5 399 aa13.12□□□□□ -0.31
CCDC38-203ENST00000546803 SEC22AQ96IW7 307 aa13.12□□□□□ -0.31
CCDC38-203ENST00000546803 UBE2E2Q96LR5 201 aa13.12□□□□□ -0.31
CCDC38-203ENST00000546803 COMMD5Q9GZQ3 224 aa13.12□□□□□ -0.31
CCDC38-203ENST00000546803 KCNIP3Q9Y2W7 256 aa13.12□□□□□ -0.31
CCDC38-203ENST00000546803 TRAV3A0A0B4J244 114 aa13.11□□□□□ -0.31
CCDC38-203ENST00000546803 OR9G9P0C7N8 305 aa13.11□□□□□ -0.31
CCDC38-203ENST00000546803 RBMS2Q15434 407 aaKnown RBP13.11□□□□□ -0.31
CCDC38-203ENST00000546803 TRIM16LQ309B1 348 aa13.11□□□□□ -0.31
CCDC38-203ENST00000546803 SP6Q3SY56 376 aa13.11□□□□□ -0.31
CCDC38-203ENST00000546803 LCNL1Q6ZST4 164 aa13.11□□□□□ -0.31
CCDC38-203ENST00000546803 H2BFWTQ7Z2G1 175 aa13.11□□□□□ -0.31
CCDC38-203ENST00000546803 SLC25A42Q86VD7 318 aa13.11□□□□□ -0.31
CCDC38-203ENST00000546803 OR5T1Q8NG75 326 aa13.11□□□□□ -0.31
CCDC38-203ENST00000546803 FAM110DQ8TAY7 271 aaPredicted RBP13.11□□□□□ -0.31
CCDC38-203ENST00000546803 GALNT14Q96FL9 552 aa13.11□□□□□ -0.31
CCDC38-203ENST00000546803 SRSF8Q9BRL6 282 aaKnown RBP13.11□□□□□ -0.31
CCDC38-203ENST00000546803 WDR12Q9GZL7 423 aaKnown RBP13.11□□□□□ -0.31
CCDC38-203ENST00000546803 TMEM222Q9H0R3 208 aa13.11□□□□□ -0.31
CCDC38-203ENST00000546803 FKBP11Q9NYL4 201 aa13.11□□□□□ -0.31
CCDC38-203ENST00000546803 PRNDQ9UKY0 176 aa13.11□□□□□ -0.31
CCDC38-203ENST00000546803 DNHD1Q96M86 4753 aa13.11□□□□□ -0.31
CCDC38-203ENST00000546803 TEX22C9J3V5 150 aa13.1□□□□□ -0.31
CCDC38-203ENST00000546803 OR5AC1P0C628 307 aa13.1□□□□□ -0.31
CCDC38-203ENST00000546803 KIAA0141Q14154 515 aaPredicted RBP13.1□□□□□ -0.31
CCDC38-203ENST00000546803 THOC7Q6I9Y2 204 aaKnown RBP13.1□□□□□ -0.31
CCDC38-203ENST00000546803 ZNF491Q8N8L2 437 aa13.1□□□□□ -0.31
CCDC38-203ENST00000546803 ADAD2Q8NCV1 583 aaKnown RBP13.1□□□□□ -0.31
CCDC38-203ENST00000546803 KLHL30-AS1Q8NEE0 82 aa13.1□□□□□ -0.31
CCDC38-203ENST00000546803 GLYATL2Q8WU03 294 aa13.1□□□□□ -0.31
CCDC38-203ENST00000546803 C4orf3Q8WVX3 66 aa13.1□□□□□ -0.31
CCDC38-203ENST00000546803 TMEM230Q96A57 120 aa13.1□□□□□ -0.31
CCDC38-203ENST00000546803 FYTTD1Q96QD9 318 aaKnown RBP13.1□□□□□ -0.31
CCDC38-203ENST00000546803 ZNF355PQ9NSJ1 428 aa13.1□□□□□ -0.31
CCDC38-203ENST00000546803 LINC00854A0A1B0GVQ3 168 aa13.09□□□□□ -0.31
CCDC38-203ENST00000546803 CDS2O95674 445 aa13.09□□□□□ -0.31
CCDC38-203ENST00000546803 AKR1C4P17516 323 aa13.09□□□□□ -0.31
CCDC38-203ENST00000546803 AKR1C2P52895 323 aa13.09□□□□□ -0.31
CCDC38-203ENST00000546803 OR2B8PP59922 312 aa13.09□□□□□ -0.31
CCDC38-203ENST00000546803 ZNF846Q147U1 533 aa13.09□□□□□ -0.31
CCDC38-203ENST00000546803 TTC9CQ8N5M4 171 aa13.09□□□□□ -0.31
CCDC38-203ENST00000546803 OR1L8Q8NGR8 309 aa13.09□□□□□ -0.31
CCDC38-203ENST00000546803 QTRT1Q9BXR0 403 aaKnown RBP13.09□□□□□ -0.31
CCDC38-203ENST00000546803 PIGBOS1A0A0B4J2F0 54 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 HMX3A6NHT5 357 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 NPIPB5A8MRT5 1133 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 E7EUB6 86 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 PF4P02776 101 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 TRGV3P03979 118 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 APELAP0DMC3 54 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 ANXA3P12429 323 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 TPPP2P59282 170 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 TMEM128Q5BJH2 165 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 C18orf65Q6ZTR6 163 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 C8orf86Q6ZUL3 223 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 HSD17B13Q7Z5P4 300 aaPredicted RBP13.08□□□□□ -0.32
CCDC38-203ENST00000546803 TMED4Q7Z7H5 227 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 OR5B3Q8NH48 314 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 OR4A16Q8NH70 328 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 RBPMSQ93062 196 aaKnown RBP13.08□□□□□ -0.32
CCDC38-203ENST00000546803 RRNAD1Q96FB5 475 aaKnown RBP13.08□□□□□ -0.32
CCDC38-203ENST00000546803 TMEM56Q96MV1 263 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 MS4A10Q96PG2 267 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 TMEM14BQ9NUH8 114 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 COA4Q9NYJ1 87 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 ZNF257Q9Y2Q1 563 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 NSG2Q9Y328 171 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 OR51B2Q9Y5P1 312 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 TMEM56-RWDD3S4R434 201 aa13.08□□□□□ -0.32
CCDC38-203ENST00000546803 TET2Q6N021 2002 aaPredicted RBP13.07□□□□□ -0.32
CCDC38-203ENST00000546803 A0A0G2JLM5 398 aa13.07□□□□□ -0.32
CCDC38-203ENST00000546803 TEX50A0A1B0GTY4 177 aa13.07□□□□□ -0.32
CCDC38-203ENST00000546803 A0A1B0GW64 132 aa13.07□□□□□ -0.32
CCDC38-203ENST00000546803 CGB1A6NKQ9 187 aa13.07□□□□□ -0.32
CCDC38-203ENST00000546803 C15orf61A6NNL5 157 aa13.07□□□□□ -0.32
CCDC38-203ENST00000546803 NDUFB6O95139 128 aa13.07□□□□□ -0.32
CCDC38-203ENST00000546803 IGKV1-5P01602 117 aa13.07□□□□□ -0.32
CCDC38-203ENST00000546803 P0C879 139 aa13.07□□□□□ -0.32
CCDC38-203ENST00000546803 TRAPPC2P0DI81 140 aa13.07□□□□□ -0.32
CCDC38-203ENST00000546803 TRAPPC2BP0DI82 140 aa13.07□□□□□ -0.32
CCDC38-203ENST00000546803 MYOD1P15172 320 aa13.07□□□□□ -0.32
CCDC38-203ENST00000546803 MYCNOSP40205 109 aa13.07□□□□□ -0.32
CCDC38-203ENST00000546803 CCR6P51684 374 aa13.07□□□□□ -0.32
CCDC38-203ENST00000546803 RUNX1Q01196 453 aa13.07□□□□□ -0.32
CCDC38-203ENST00000546803 FAM219AQ8IW50 185 aa13.07□□□□□ -0.32
CCDC38-203ENST00000546803 CASTOR1Q8WTX7 329 aa13.07□□□□□ -0.32
CCDC38-203ENST00000546803 IL22RA2Q969J5 263 aa13.07□□□□□ -0.32
CCDC38-203ENST00000546803 CCL24O00175 119 aa13.06□□□□□ -0.32
CCDC38-203ENST00000546803 PLA2G10O15496 165 aa13.06□□□□□ -0.32
CCDC38-203ENST00000546803 LYRM1O43325 122 aa13.06□□□□□ -0.32
CCDC38-203ENST00000546803 DHFRP00374 187 aa13.06□□□□□ -0.32
CCDC38-203ENST00000546803 CRYGCP07315 174 aa13.06□□□□□ -0.32
CCDC38-203ENST00000546803 PSMB6P28072 239 aa13.06□□□□□ -0.32
CCDC38-203ENST00000546803 UBE2MP61081 183 aaKnown RBP13.06□□□□□ -0.32
CCDC38-203ENST00000546803 SUPT4H1P63272 117 aaKnown RBP13.06□□□□□ -0.32
CCDC38-203ENST00000546803 SRPXP78539 464 aa13.06□□□□□ -0.32
CCDC38-203ENST00000546803 TMEM187Q14656 261 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms