RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 C5orf66Q9H5L9 145 aa5.35□□□□□ -1.55
CCDC60-205ENST00000546345 TMEM231Q9H6L2 316 aa5.35□□□□□ -1.55
CCDC60-205ENST00000546345 CDH20Q9HBT6 801 aa5.35□□□□□ -1.55
CCDC60-205ENST00000546345 ZNRD1Q9P1U0 126 aa5.35□□□□□ -1.55
CCDC60-205ENST00000546345 FBXL17Q9UF56 701 aa5.35□□□□□ -1.55
CCDC60-205ENST00000546345 RPUSD1Q9UJJ7 312 aaKnown RBP5.35□□□□□ -1.55
CCDC60-205ENST00000546345 TRAV9-1A0A075B6T8 112 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 LOC100509620A0A075B734 347 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 IGHV1-69DA0A0B4J2H0 117 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 KIR2DL5BA0A0G2JN68 375 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 KIR2DL5BA0A0G2JPC4 375 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 A0A1B0GU03 582 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 A0A1W2PN81 502 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 A0A1W2PPQ1 181 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 TMEM235A6NFC5 223 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 IFITM10A6NMD0 228 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 A8MVM7 634 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 PITX3O75364 302 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 RPP14O95059 124 aaKnown RBP5.34□□□□□ -1.55
CCDC60-205ENST00000546345 YIF1AO95070 293 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 VAMP5O95183 116 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 OR6A2O95222 327 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 IGHV1-69P01742 117 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 TYMSP04818 313 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 CST2P09228 141 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 PGA3P0DJD8 388 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 GZMBP10144 247 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 HIST1H1DP16402 221 aaKnown RBP5.34□□□□□ -1.55
CCDC60-205ENST00000546345 CHRNA7P36544 502 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 MDH2P40926 338 aaKnown RBP5.34□□□□□ -1.55
CCDC60-205ENST00000546345 WNT5AP41221 380 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 CDKN2AP42771 156 aaKnown RBP5.34□□□□□ -1.55
CCDC60-205ENST00000546345 PCP4P48539 62 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 BPIFB3P59826 476 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 HIST1H3AP68431 136 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 RPL19P84098 196 aaKnown RBP5.34□□□□□ -1.55
CCDC60-205ENST00000546345 ZNF616Q08AN1 781 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 MPV17LQ2QL34 196 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 IAH1Q2TAA2 248 aaPredicted RBP5.34□□□□□ -1.55
CCDC60-205ENST00000546345 NSUN5P1Q3KNT7 163 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 SPATA46Q5T0L3 261 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 C1orf122Q6ZSJ8 110 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 CENPVQ7Z7K6 275 aaPredicted RBP5.34□□□□□ -1.55
CCDC60-205ENST00000546345 ZNF429Q86V71 674 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 C20orf196Q8IYI0 205 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 KIR2DL5AQ8N109 375 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 CCDC71LQ8N9Z2 235 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 WFDC9Q8NEX5 89 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 NOXO1Q8NFA2 376 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 OR4S1Q8NGB4 309 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 OR51L1Q8NGJ5 315 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 MARCH1Q8TCQ1 289 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 HIST1H2BLQ99880 126 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 C20orf144Q9BQM9 153 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 PCGF1Q9BSM1 259 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 PARD6GQ9BYG4 376 aaPredicted RBP5.34□□□□□ -1.55
CCDC60-205ENST00000546345 ELOVL3Q9HB03 270 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 LYRM2Q9NU23 88 aaPredicted RBP5.34□□□□□ -1.55
CCDC60-205ENST00000546345 WSB1Q9Y6I7 421 aa5.34□□□□□ -1.55
CCDC60-205ENST00000546345 MUC4Q99102 2169 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 A0A1W2PPE2 198 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 PRSS37A4D1T9 235 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 MSGN1A6NI15 193 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 CRYM-AS1A6NIL9 109 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 LINC01548A6NM66 108 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 C9JQL5 133 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 TMEM250H0YL14 139 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 CYB5BO43169 146 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 SRSF10O75494 262 aaKnown RBP5.33□□□□□ -1.56
CCDC60-205ENST00000546345 FCN3O75636 299 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 SRP19P09132 144 aaKnown RBP5.33□□□□□ -1.56
CCDC60-205ENST00000546345 TRGC1P0CF51 173 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 NHLRC4P0CG21 123 aaPredicted RBP5.33□□□□□ -1.56
CCDC60-205ENST00000546345 CD28P10747 220 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 SLC25A6P12236 298 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 NR2C1P13056 603 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 HLA-DOBP13765 273 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 FABP4P15090 132 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 DTYMKP23919 212 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 OR10J1P30954 320 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 HOXD3P31249 432 aaPredicted RBP5.33□□□□□ -1.56
CCDC60-205ENST00000546345 NPY4RP50391 375 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 RPL27P61353 136 aaKnown RBP5.33□□□□□ -1.56
CCDC60-205ENST00000546345 GNB2P62879 340 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 SUPT4H1P63272 117 aaKnown RBP5.33□□□□□ -1.56
CCDC60-205ENST00000546345 PAFAH1B2P68402 229 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 SERF2P84101 59 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 EGR4Q05215 589 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 FHL3Q13643 280 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 SRSF7Q16629 238 aaKnown RBP eCLIP5.33□□□□□ -1.56
CCDC60-205ENST00000546345 MEP1BQ16820 701 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 C1orf140Q5VVS0 124 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 CARD17Q5XLA6 110 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 ADAMTSL5Q6ZMM2 481 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 DPY19L4Q7Z388 723 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 LGI3Q8N145 548 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 JAGN1Q8N5M9 183 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 SLC24A4Q8NFF2 622 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 OR1P1Q8NH06 330 aa5.33□□□□□ -1.56
CCDC60-205ENST00000546345 Q8WTZ3 238 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms