RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 OR9G9P0C7N8 305 aa13.7□□□□□ -0.22
CD9-211ENST00000546073 AKR1C4P17516 323 aa13.7□□□□□ -0.22
CD9-211ENST00000546073 PSMB8P28062 276 aa13.7□□□□□ -0.22
CD9-211ENST00000546073 MECP2P51608 486 aaKnown RBP13.7□□□□□ -0.22
CD9-211ENST00000546073 RAB25P57735 213 aa13.7□□□□□ -0.22
CD9-211ENST00000546073 BRWD1-AS2P59051 145 aa13.7□□□□□ -0.22
CD9-211ENST00000546073 SRPXP78539 464 aa13.7□□□□□ -0.22
CD9-211ENST00000546073 NDPQ00604 133 aa13.7□□□□□ -0.22
CD9-211ENST00000546073 ZNF846Q147U1 533 aa13.7□□□□□ -0.22
CD9-211ENST00000546073 RBMS2Q15434 407 aaKnown RBP13.7□□□□□ -0.22
CD9-211ENST00000546073 TMED4Q7Z7H5 227 aa13.7□□□□□ -0.22
CD9-211ENST00000546073 CADM3Q8N126 398 aa13.7□□□□□ -0.22
CD9-211ENST00000546073 UBE2E2Q96LR5 201 aa13.7□□□□□ -0.22
CD9-211ENST00000546073 TMEM56Q96MV1 263 aa13.7□□□□□ -0.22
CD9-211ENST00000546073 MS4A10Q96PG2 267 aa13.7□□□□□ -0.22
CD9-211ENST00000546073 CCDC32Q9BV29 185 aa13.7□□□□□ -0.22
CD9-211ENST00000546073 HINT2Q9BX68 163 aa13.7□□□□□ -0.22
CD9-211ENST00000546073 NAA60Q9H7X0 242 aa13.7□□□□□ -0.22
CD9-211ENST00000546073 IGLV1-40P01703 118 aa13.69□□□□□ -0.22
CD9-211ENST00000546073 TRAPPC2P0DI81 140 aa13.69□□□□□ -0.22
CD9-211ENST00000546073 TRAPPC2BP0DI82 140 aa13.69□□□□□ -0.22
CD9-211ENST00000546073 CD33P20138 364 aa13.69□□□□□ -0.22
CD9-211ENST00000546073 CFHR3Q02985 330 aa13.69□□□□□ -0.22
CD9-211ENST00000546073 TCTEX1D4Q5JR98 221 aa13.69□□□□□ -0.22
CD9-211ENST00000546073 RNF152Q8N8N0 203 aa13.69□□□□□ -0.22
CD9-211ENST00000546073 OR1L8Q8NGR8 309 aa13.69□□□□□ -0.22
CD9-211ENST00000546073 SRSF8Q9BRL6 282 aaKnown RBP13.69□□□□□ -0.22
CD9-211ENST00000546073 CACFD1Q9UGQ2 172 aa13.69□□□□□ -0.22
CD9-211ENST00000546073 FBXO7Q9Y3I1 522 aa13.69□□□□□ -0.22
CD9-211ENST00000546073 APELAP0DMC3 54 aa13.68□□□□□ -0.22
CD9-211ENST00000546073 EGR2P11161 476 aaPredicted RBP13.68□□□□□ -0.22
CD9-211ENST00000546073 IL7P13232 177 aa13.68□□□□□ -0.22
CD9-211ENST00000546073 MYCNOSP40205 109 aa13.68□□□□□ -0.22
CD9-211ENST00000546073 BAK1Q16611 211 aa13.68□□□□□ -0.22
CD9-211ENST00000546073 SP6Q3SY56 376 aa13.68□□□□□ -0.22
CD9-211ENST00000546073 ZNF585BQ52M93 769 aa13.68□□□□□ -0.22
CD9-211ENST00000546073 OR5B3Q8NH48 314 aa13.68□□□□□ -0.22
CD9-211ENST00000546073 C4orf3Q8WVX3 66 aa13.68□□□□□ -0.22
CD9-211ENST00000546073 MRGPRFQ96AM1 343 aa13.68□□□□□ -0.22
CD9-211ENST00000546073 USMG5Q96IX5 58 aa13.68□□□□□ -0.22
CD9-211ENST00000546073 RTBDNQ9BSG5 229 aaPredicted RBP13.68□□□□□ -0.22
CD9-211ENST00000546073 QTRT1Q9BXR0 403 aaKnown RBP13.68□□□□□ -0.22
CD9-211ENST00000546073 C5orf66Q9H5L9 145 aa13.68□□□□□ -0.22
CD9-211ENST00000546073 THYN1Q9P016 225 aa13.68□□□□□ -0.22
CD9-211ENST00000546073 ZNF257Q9Y2Q1 563 aa13.68□□□□□ -0.22
CD9-211ENST00000546073 OR51B2Q9Y5P1 312 aa13.68□□□□□ -0.22
CD9-211ENST00000546073 TET2Q6N021 2002 aaPredicted RBP13.68□□□□□ -0.22
CD9-211ENST00000546073 CRYM-AS1A6NIL9 109 aa13.67□□□□□ -0.22
CD9-211ENST00000546073 TSPAN15O95858 294 aa13.67□□□□□ -0.22
CD9-211ENST00000546073 OR5AC1P0C628 307 aa13.67□□□□□ -0.22
CD9-211ENST00000546073 HIST1H1BP16401 226 aaKnown RBP13.67□□□□□ -0.22
CD9-211ENST00000546073 FAM209BQ5JX69 171 aa13.67□□□□□ -0.22
CD9-211ENST00000546073 MZT2BQ6NZ67 158 aa13.67□□□□□ -0.22
CD9-211ENST00000546073 LCNL1Q6ZST4 164 aa13.67□□□□□ -0.22
CD9-211ENST00000546073 FAM219AQ8IW50 185 aa13.67□□□□□ -0.22
CD9-211ENST00000546073 CENPSQ8N2Z9 138 aa13.67□□□□□ -0.22
CD9-211ENST00000546073 TP53RKQ96S44 253 aa13.67□□□□□ -0.22
CD9-211ENST00000546073 TMEM222Q9H0R3 208 aa13.67□□□□□ -0.22
CD9-211ENST00000546073 ENY2Q9NPA8 101 aa13.67□□□□□ -0.22
CD9-211ENST00000546073 VAMP1P23763 118 aa13.66□□□□□ -0.22
CD9-211ENST00000546073 UCP1P25874 307 aa13.66□□□□□ -0.22
CD9-211ENST00000546073 TMEM128Q5BJH2 165 aa13.66□□□□□ -0.22
CD9-211ENST00000546073 HIST2H2BDQ6DRA6 164 aa13.66□□□□□ -0.22
CD9-211ENST00000546073 C8orf86Q6ZUL3 223 aa13.66□□□□□ -0.22
CD9-211ENST00000546073 TTC9CQ8N5M4 171 aa13.66□□□□□ -0.22
CD9-211ENST00000546073 ZNF491Q8N8L2 437 aa13.66□□□□□ -0.22
CD9-211ENST00000546073 RBPMSQ93062 196 aaKnown RBP13.66□□□□□ -0.22
CD9-211ENST00000546073 GPR61Q9BZJ8 451 aa13.66□□□□□ -0.22
CD9-211ENST00000546073 FAM223BA6NKX1 122 aa13.65□□□□□ -0.22
CD9-211ENST00000546073 CCL24O00175 119 aa13.65□□□□□ -0.22
CD9-211ENST00000546073 DUS4LO95620 317 aaKnown RBP13.65□□□□□ -0.22
CD9-211ENST00000546073 IFNA17P01571 189 aa13.65□□□□□ -0.22
CD9-211ENST00000546073 ATP5G2Q06055 141 aa13.65□□□□□ -0.22
CD9-211ENST00000546073 FAM223AQ8IWN6 122 aa13.65□□□□□ -0.22
CD9-211ENST00000546073 LGI3Q8N145 548 aa13.65□□□□□ -0.22
CD9-211ENST00000546073 OR1L6Q8NGR2 347 aa13.65□□□□□ -0.22
CD9-211ENST00000546073 IL22RA2Q969J5 263 aa13.65□□□□□ -0.22
CD9-211ENST00000546073 LSM10Q969L4 123 aaKnown RBP13.65□□□□□ -0.22
CD9-211ENST00000546073 SEC22AQ96IW7 307 aa13.65□□□□□ -0.22
CD9-211ENST00000546073 MCRIP2Q9BUT9 160 aaKnown RBP13.65□□□□□ -0.22
CD9-211ENST00000546073 KLK15Q9H2R5 256 aa13.65□□□□□ -0.22
CD9-211ENST00000546073 HMX3A6NHT5 357 aa13.64□□□□□ -0.23
CD9-211ENST00000546073 NPIPB5A8MRT5 1133 aa13.64□□□□□ -0.23
CD9-211ENST00000546073 BRI3O95415 125 aa13.64□□□□□ -0.23
CD9-211ENST00000546073 CDS2O95674 445 aa13.64□□□□□ -0.23
CD9-211ENST00000546073 OR8U8P0C7N1 319 aa13.64□□□□□ -0.23
CD9-211ENST00000546073 ERHP84090 104 aaKnown RBP13.64□□□□□ -0.23
CD9-211ENST00000546073 C10orf55Q5SWW7 151 aa13.64□□□□□ -0.23
CD9-211ENST00000546073 TMEM268Q5VZI3 342 aa13.64□□□□□ -0.23
CD9-211ENST00000546073 SLC35G3Q8N808 338 aa13.64□□□□□ -0.23
CD9-211ENST00000546073 OR1N2Q8NGR9 330 aa13.64□□□□□ -0.23
CD9-211ENST00000546073 GALNT14Q96FL9 552 aa13.64□□□□□ -0.23
CD9-211ENST00000546073 OR5B12Q96R08 314 aa13.64□□□□□ -0.23
CD9-211ENST00000546073 AKIP1Q9NQ31 210 aa13.64□□□□□ -0.23
CD9-211ENST00000546073 NSG2Q9Y328 171 aa13.64□□□□□ -0.23
CD9-211ENST00000546073 TEX50A0A1B0GTY4 177 aa13.63□□□□□ -0.23
CD9-211ENST00000546073 C15orf61A6NNL5 157 aa13.63□□□□□ -0.23
CD9-211ENST00000546073 PSMB6P28072 239 aa13.63□□□□□ -0.23
CD9-211ENST00000546073 OR2B8PP59922 312 aa13.63□□□□□ -0.23
CD9-211ENST00000546073 UBE2MP61081 183 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms